| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338113
Identifier: 146338113
GI number: 146338113
Start: 1077750
End: 1079102
Strand: Direct
Name: 146338113
Synonym: BRADO1009
Alternate gene names: NA
Gene position: 1077750-1079102 (Clockwise)
Preceding gene: 146338110
Following gene: 146338116
Centisome position: 14.45
GC content: 67.18
Gene sequence:
>1353_bases GTGTCGTGGCTGCACGCGTCGGACTTGTCTGATGGGGAGTTCGCTATGCTCCAGGAGGCGTATCTGATGAACGTCGAGGG CCGTGCTCCGGACACGCCGAACCTGGAGGCCGCCGGAGGAGCCGGCCGTCCCTGGGCGGAAGCCCCCGCCTATCTCCTCA TCCTCGATCTCCTCGCAATATTCGCCGCGGTGACGCTGCCGTGGTCCACGACCGCCACCACGGTGCTGATGGTGGGCTGG TCGATCGCGGTGATTCCGACGATCGATTGGGACGAGTTCATCAGAAGCCTGGCGCTTCCGGCCTGCGCGCTGCCGCTGGC GCTGTTCGTCCTGGCCGATATCGGCGTGCTGTGGTCCGACGGGCCGTGGGAATTGGGCGTGCAAGCCGTCAATCCCGTGT CGAAGCTGCTGCTGCTTCCCCTGCTGCTTTATCACTTCAGGCGCTCGGATCGCGCCCCCTGGGTGCTGATGAGCTTTGCG ATGTCATCGGCCGTCATGATGATGCTGTCATGGGTCGCACTGGCAGATCCGTCGACGCTGGCAGCAGCCCTGCCGGTCGA GCAGGCGCTCGGCTCGCATCAGCCCTTCACGCTGTGCGCGCTCGCGCTGGTGGGGCCGGCTCTCGCCGGCCATGCGAGGG GGCAGACTGCCGCGGCGTTCGCCTTCGCAGGACTGAGCGCGCTGTTCCTGAGCCACGAACTGCTCGTCACGCCCGCGCAG ACCGCCTGCGTCACCACCACCACTCTCGTGCTCGTGCTGGCCATACGCCATGTCAGCCGGCGCTTGGCGGTGCTGCTGTT GGCGGCAGCGGCCTTGACCGGCAGTGTTGCGTGGGCGGCGTCTCCGTTGTTGAGCCGGCCGATCGTGCAAACCGTGGTGC AGATGCATCTGTCGATTCTCACCGGCGACGGAGCCGCGGAGCGTCGGCCCGATTGGCGACGCGCCCTGGCGTCGCTTGCC GAAGCGCCGCTGTTAGGTCACGGCACCGGCGCGATCCGTCCGCCTTTTGCCGCTGATGCTCGCGGACCCCTGGAGGTGCG CGGCACCGGCCGCGATGCGCAGAGCCTGTCCGTCGCCTGGCAATGGGGACTGGCCGGTGTCGTCCTGCTCGCTGCAATGT GGATCAGTCACATCCATCTGGTCCGCGGACGCGACGGGATCGGGTGGGTCGGATTGACGATCATCGTGCAGACCTGCGTC GGCTCGATGCTGGGCTCCAATGTCGTCGGCGTCAATGAAGGCTGGATCTATGTGATCGGTCTCGGCGTAGCCGGCGGCGT CGCCCTTCGGCGTCGGGCTGGGGATCCGGACAAGGCCCCGCGCCCTGCTTTGCCCGTTGGATCGGTTTTCTGA
Upstream 100 bases:
>100_bases CGTGTGAAAAATTCCCACGTATTGAGGATCACGTTCAACCCACGGCCCGTGCCGCGGCCGGGGTGCCAGGGCGCGCTGCA CCTGCTTCGCCGCCGTCCTG
Downstream 100 bases:
>100_bases AAATCAGTCAATAGATTCAGATAAAAATAAATCACTTGCGCTCCCGGCTCATCATCGACAATGATGGCCGCGTCCTGTCC CACGAGAGGGGCGAACGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: O-Antigen Ligase
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MSWLHASDLSDGEFAMLQEAYLMNVEGRAPDTPNLEAAGGAGRPWAEAPAYLLILDLLAIFAAVTLPWSTTATTVLMVGW SIAVIPTIDWDEFIRSLALPACALPLALFVLADIGVLWSDGPWELGVQAVNPVSKLLLLPLLLYHFRRSDRAPWVLMSFA MSSAVMMMLSWVALADPSTLAAALPVEQALGSHQPFTLCALALVGPALAGHARGQTAAAFAFAGLSALFLSHELLVTPAQ TACVTTTTLVLVLAIRHVSRRLAVLLLAAAALTGSVAWAASPLLSRPIVQTVVQMHLSILTGDGAAERRPDWRRALASLA EAPLLGHGTGAIRPPFAADARGPLEVRGTGRDAQSLSVAWQWGLAGVVLLAAMWISHIHLVRGRDGIGWVGLTIIVQTCV GSMLGSNVVGVNEGWIYVIGLGVAGGVALRRRAGDPDKAPRPALPVGSVF
Sequences:
>Translated_450_residues MSWLHASDLSDGEFAMLQEAYLMNVEGRAPDTPNLEAAGGAGRPWAEAPAYLLILDLLAIFAAVTLPWSTTATTVLMVGW SIAVIPTIDWDEFIRSLALPACALPLALFVLADIGVLWSDGPWELGVQAVNPVSKLLLLPLLLYHFRRSDRAPWVLMSFA MSSAVMMMLSWVALADPSTLAAALPVEQALGSHQPFTLCALALVGPALAGHARGQTAAAFAFAGLSALFLSHELLVTPAQ TACVTTTTLVLVLAIRHVSRRLAVLLLAAAALTGSVAWAASPLLSRPIVQTVVQMHLSILTGDGAAERRPDWRRALASLA EAPLLGHGTGAIRPPFAADARGPLEVRGTGRDAQSLSVAWQWGLAGVVLLAAMWISHIHLVRGRDGIGWVGLTIIVQTCV GSMLGSNVVGVNEGWIYVIGLGVAGGVALRRRAGDPDKAPRPALPVGSVF >Mature_449_residues SWLHASDLSDGEFAMLQEAYLMNVEGRAPDTPNLEAAGGAGRPWAEAPAYLLILDLLAIFAAVTLPWSTTATTVLMVGWS IAVIPTIDWDEFIRSLALPACALPLALFVLADIGVLWSDGPWELGVQAVNPVSKLLLLPLLLYHFRRSDRAPWVLMSFAM SSAVMMMLSWVALADPSTLAAALPVEQALGSHQPFTLCALALVGPALAGHARGQTAAAFAFAGLSALFLSHELLVTPAQT ACVTTTTLVLVLAIRHVSRRLAVLLLAAAALTGSVAWAASPLLSRPIVQTVVQMHLSILTGDGAAERRPDWRRALASLAE APLLGHGTGAIRPPFAADARGPLEVRGTGRDAQSLSVAWQWGLAGVVLLAAMWISHIHLVRGRDGIGWVGLTIIVQTCVG SMLGSNVVGVNEGWIYVIGLGVAGGVALRRRAGDPDKAPRPALPVGSVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47373; Mature: 47242
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLHASDLSDGEFAMLQEAYLMNVEGRAPDTPNLEAAGGAGRPWAEAPAYLLILDLLAI CCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHH FAAVTLPWSTTATTVLMVGWSIAVIPTIDWDEFIRSLALPACALPLALFVLADIGVLWSD HHHHHCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC GPWELGVQAVNPVSKLLLLPLLLYHFRRSDRAPWVLMSFAMSSAVMMMLSWVALADPSTL CCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH AAALPVEQALGSHQPFTLCALALVGPALAGHARGQTAAAFAFAGLSALFLSHELLVTPAQ HHHCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHEECCCH TACVTTTTLVLVLAIRHVSRRLAVLLLAAAALTGSVAWAASPLLSRPIVQTVVQMHLSIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH TGDGAAERRPDWRRALASLAEAPLLGHGTGAIRPPFAADARGPLEVRGTGRDAQSLSVAW CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHH QWGLAGVVLLAAMWISHIHLVRGRDGIGWVGLTIIVQTCVGSMLGSNVVGVNEGWIYVIG HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEE LGVAGGVALRRRAGDPDKAPRPALPVGSVF ECCCCCHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SWLHASDLSDGEFAMLQEAYLMNVEGRAPDTPNLEAAGGAGRPWAEAPAYLLILDLLAI CCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHH FAAVTLPWSTTATTVLMVGWSIAVIPTIDWDEFIRSLALPACALPLALFVLADIGVLWSD HHHHHCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC GPWELGVQAVNPVSKLLLLPLLLYHFRRSDRAPWVLMSFAMSSAVMMMLSWVALADPSTL CCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH AAALPVEQALGSHQPFTLCALALVGPALAGHARGQTAAAFAFAGLSALFLSHELLVTPAQ HHHCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHEECCCH TACVTTTTLVLVLAIRHVSRRLAVLLLAAAALTGSVAWAASPLLSRPIVQTVVQMHLSIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH TGDGAAERRPDWRRALASLAEAPLLGHGTGAIRPPFAADARGPLEVRGTGRDAQSLSVAW CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHH QWGLAGVVLLAAMWISHIHLVRGRDGIGWVGLTIIVQTCVGSMLGSNVVGVNEGWIYVIG HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEE LGVAGGVALRRRAGDPDKAPRPALPVGSVF ECCCCCHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA