Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is yiaV [C]

Identifier: 146338095

GI number: 146338095

Start: 1053208

End: 1054227

Strand: Reverse

Name: yiaV [C]

Synonym: BRADO0991

Alternate gene names: 146338095

Gene position: 1054227-1053208 (Counterclockwise)

Preceding gene: 146338096

Following gene: 146338092

Centisome position: 14.14

GC content: 72.25

Gene sequence:

>1020_bases
ATGAACAAGCCCGGTCGAGCTCCCTACGTTGTCGCGCTGCTGCTGGCGGCGTCGACGGTGCTCGCGGCCGCGCCGCGCTT
GATCACCCAGGAGGCGCGCGCCGCCAACGCCCAGGAGGAGCGATGGCTCGCGGTCGCGCCCGGGCGTGTCGAGCCGGCGT
CCGGCCTGATCAAGCTGGGCGTGCCCGTGGTCGGCGCGATCCAGGAGGTGCTGGTAAAGCCCGGCGACAGCGTGTTCGCC
GGCCAGGCCCTGGTGCGGCTCTCTGACGCCGAGGCGCGCGCGCAGCTCGCCAGCGCCGAGGCGCAGGCGGCGATGCGCAA
GCGCGTGCGCAACAAGGAAACGACGCCGTCGGGCGCAGGGCCCCGGCGACGCGCCGAGGATGGCGTCGCCGATGCGCAAG
CCGCGGTGTTCGACGCGCGCGTTGCGCTCGACAAGGCGGTGGCCGAGCGGCGCGCCGGGCGCGGCGCCGATGCCGACGTG
GAGAGTGCGCGCACGCAAGCGACGAATGCACAGGCGAAGCTGGAGCAGCAGACCGAAGAGTTGCGCAAGGTCACGGCCGA
CGCGCCGCTGCCGATCGGCGCCGAAGGCCAGCTCAACGTCGCCCGCGCCGATCTGCAGGCCGCGCGCGCCACGCTGGAGA
AGCTCACACTCCGTGCGCCGCTCGACGGCACCATCCTGCAGGTCAACGCGCGTGCCGGCGAGATCGCCTCGCCGCAAGGA
TCGCAGCCGCTGGTGCTGCTCGGCGACATGTCGTCCTTGCGCGTCCGCGCCGAACTCGATCAGCGCGACCTCGACAAGAT
CAAGGTGGGCCAGCAGGCCGTGGTCCGCTCCGACGCCTTCCGCGGCCGCGACGTCGCCGGCAAGGTCGCGTCCGTTGCCC
CGCTGGTCGAGAGCAGCCGCACGGCTGCGCTCAGCCAGCGCAACATGACCGATGTCGACGTCGTCGAGGTGCTGGTCGAT
CTCGCCGAGCCCGGCCCGTTCGCGGTGGGCATGAAGGTGGATGTGTATTTCAGGCCGTGA

Upstream 100 bases:

>100_bases
CGCGCATCCTGCCGTTCGCCAGCCGCGTCGTTCATATCGAGGACGGCCGGATCGTCCGCGAGGAGGCAGTGACAGACTCG
ATGAAGAAGGTCTCGAACGC

Downstream 100 bases:

>100_bases
GTAGTGACTTCGCTGCTTCCACGGCGGCAGTCCGCTCCCTCTCCCCGTTCTTCACGGGGAGAGGGTTGGGGTGAGGGGCA
GACGCACGGGAAGTGCGAAT

Product: putative signal peptide

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Membrane-Fusion Protein; Signal Peptide; Secretion Protein HlyD; HlyD Family Secretion Protein; Efflux Transporter

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MNKPGRAPYVVALLLAASTVLAAAPRLITQEARAANAQEERWLAVAPGRVEPASGLIKLGVPVVGAIQEVLVKPGDSVFA
GQALVRLSDAEARAQLASAEAQAAMRKRVRNKETTPSGAGPRRRAEDGVADAQAAVFDARVALDKAVAERRAGRGADADV
ESARTQATNAQAKLEQQTEELRKVTADAPLPIGAEGQLNVARADLQAARATLEKLTLRAPLDGTILQVNARAGEIASPQG
SQPLVLLGDMSSLRVRAELDQRDLDKIKVGQQAVVRSDAFRGRDVAGKVASVAPLVESSRTAALSQRNMTDVDVVEVLVD
LAEPGPFAVGMKVDVYFRP

Sequences:

>Translated_339_residues
MNKPGRAPYVVALLLAASTVLAAAPRLITQEARAANAQEERWLAVAPGRVEPASGLIKLGVPVVGAIQEVLVKPGDSVFA
GQALVRLSDAEARAQLASAEAQAAMRKRVRNKETTPSGAGPRRRAEDGVADAQAAVFDARVALDKAVAERRAGRGADADV
ESARTQATNAQAKLEQQTEELRKVTADAPLPIGAEGQLNVARADLQAARATLEKLTLRAPLDGTILQVNARAGEIASPQG
SQPLVLLGDMSSLRVRAELDQRDLDKIKVGQQAVVRSDAFRGRDVAGKVASVAPLVESSRTAALSQRNMTDVDVVEVLVD
LAEPGPFAVGMKVDVYFRP
>Mature_339_residues
MNKPGRAPYVVALLLAASTVLAAAPRLITQEARAANAQEERWLAVAPGRVEPASGLIKLGVPVVGAIQEVLVKPGDSVFA
GQALVRLSDAEARAQLASAEAQAAMRKRVRNKETTPSGAGPRRRAEDGVADAQAAVFDARVALDKAVAERRAGRGADADV
ESARTQATNAQAKLEQQTEELRKVTADAPLPIGAEGQLNVARADLQAARATLEKLTLRAPLDGTILQVNARAGEIASPQG
SQPLVLLGDMSSLRVRAELDQRDLDKIKVGQQAVVRSDAFRGRDVAGKVASVAPLVESSRTAALSQRNMTDVDVVEVLVD
LAEPGPFAVGMKVDVYFRP

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35687; Mature: 35687

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPGRAPYVVALLLAASTVLAAAPRLITQEARAANAQEERWLAVAPGRVEPASGLIKLG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEC
VPVVGAIQEVLVKPGDSVFAGQALVRLSDAEARAQLASAEAQAAMRKRVRNKETTPSGAG
CCHHHHHHHHHHCCCCCEECCHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PRRRAEDGVADAQAAVFDARVALDKAVAERRAGRGADADVESARTQATNAQAKLEQQTEE
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LRKVTADAPLPIGAEGQLNVARADLQAARATLEKLTLRAPLDGTILQVNARAGEIASPQG
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCC
SQPLVLLGDMSSLRVRAELDQRDLDKIKVGQQAVVRSDAFRGRDVAGKVASVAPLVESSR
CCCEEEEECCCHHEEEECCCHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TAALSQRNMTDVDVVEVLVDLAEPGPFAVGMKVDVYFRP
HHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECC
>Mature Secondary Structure
MNKPGRAPYVVALLLAASTVLAAAPRLITQEARAANAQEERWLAVAPGRVEPASGLIKLG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEC
VPVVGAIQEVLVKPGDSVFAGQALVRLSDAEARAQLASAEAQAAMRKRVRNKETTPSGAG
CCHHHHHHHHHHCCCCCEECCHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PRRRAEDGVADAQAAVFDARVALDKAVAERRAGRGADADVESARTQATNAQAKLEQQTEE
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LRKVTADAPLPIGAEGQLNVARADLQAARATLEKLTLRAPLDGTILQVNARAGEIASPQG
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCC
SQPLVLLGDMSSLRVRAELDQRDLDKIKVGQQAVVRSDAFRGRDVAGKVASVAPLVESSR
CCCEEEEECCCHHEEEECCCHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TAALSQRNMTDVDVVEVLVDLAEPGPFAVGMKVDVYFRP
HHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA