| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yiaV [C]
Identifier: 146338095
GI number: 146338095
Start: 1053208
End: 1054227
Strand: Reverse
Name: yiaV [C]
Synonym: BRADO0991
Alternate gene names: 146338095
Gene position: 1054227-1053208 (Counterclockwise)
Preceding gene: 146338096
Following gene: 146338092
Centisome position: 14.14
GC content: 72.25
Gene sequence:
>1020_bases ATGAACAAGCCCGGTCGAGCTCCCTACGTTGTCGCGCTGCTGCTGGCGGCGTCGACGGTGCTCGCGGCCGCGCCGCGCTT GATCACCCAGGAGGCGCGCGCCGCCAACGCCCAGGAGGAGCGATGGCTCGCGGTCGCGCCCGGGCGTGTCGAGCCGGCGT CCGGCCTGATCAAGCTGGGCGTGCCCGTGGTCGGCGCGATCCAGGAGGTGCTGGTAAAGCCCGGCGACAGCGTGTTCGCC GGCCAGGCCCTGGTGCGGCTCTCTGACGCCGAGGCGCGCGCGCAGCTCGCCAGCGCCGAGGCGCAGGCGGCGATGCGCAA GCGCGTGCGCAACAAGGAAACGACGCCGTCGGGCGCAGGGCCCCGGCGACGCGCCGAGGATGGCGTCGCCGATGCGCAAG CCGCGGTGTTCGACGCGCGCGTTGCGCTCGACAAGGCGGTGGCCGAGCGGCGCGCCGGGCGCGGCGCCGATGCCGACGTG GAGAGTGCGCGCACGCAAGCGACGAATGCACAGGCGAAGCTGGAGCAGCAGACCGAAGAGTTGCGCAAGGTCACGGCCGA CGCGCCGCTGCCGATCGGCGCCGAAGGCCAGCTCAACGTCGCCCGCGCCGATCTGCAGGCCGCGCGCGCCACGCTGGAGA AGCTCACACTCCGTGCGCCGCTCGACGGCACCATCCTGCAGGTCAACGCGCGTGCCGGCGAGATCGCCTCGCCGCAAGGA TCGCAGCCGCTGGTGCTGCTCGGCGACATGTCGTCCTTGCGCGTCCGCGCCGAACTCGATCAGCGCGACCTCGACAAGAT CAAGGTGGGCCAGCAGGCCGTGGTCCGCTCCGACGCCTTCCGCGGCCGCGACGTCGCCGGCAAGGTCGCGTCCGTTGCCC CGCTGGTCGAGAGCAGCCGCACGGCTGCGCTCAGCCAGCGCAACATGACCGATGTCGACGTCGTCGAGGTGCTGGTCGAT CTCGCCGAGCCCGGCCCGTTCGCGGTGGGCATGAAGGTGGATGTGTATTTCAGGCCGTGA
Upstream 100 bases:
>100_bases CGCGCATCCTGCCGTTCGCCAGCCGCGTCGTTCATATCGAGGACGGCCGGATCGTCCGCGAGGAGGCAGTGACAGACTCG ATGAAGAAGGTCTCGAACGC
Downstream 100 bases:
>100_bases GTAGTGACTTCGCTGCTTCCACGGCGGCAGTCCGCTCCCTCTCCCCGTTCTTCACGGGGAGAGGGTTGGGGTGAGGGGCA GACGCACGGGAAGTGCGAAT
Product: putative signal peptide
Products: NA
Alternate protein names: Efflux Transporter RND Family MFP Subunit; Membrane-Fusion Protein; Signal Peptide; Secretion Protein HlyD; HlyD Family Secretion Protein; Efflux Transporter
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MNKPGRAPYVVALLLAASTVLAAAPRLITQEARAANAQEERWLAVAPGRVEPASGLIKLGVPVVGAIQEVLVKPGDSVFA GQALVRLSDAEARAQLASAEAQAAMRKRVRNKETTPSGAGPRRRAEDGVADAQAAVFDARVALDKAVAERRAGRGADADV ESARTQATNAQAKLEQQTEELRKVTADAPLPIGAEGQLNVARADLQAARATLEKLTLRAPLDGTILQVNARAGEIASPQG SQPLVLLGDMSSLRVRAELDQRDLDKIKVGQQAVVRSDAFRGRDVAGKVASVAPLVESSRTAALSQRNMTDVDVVEVLVD LAEPGPFAVGMKVDVYFRP
Sequences:
>Translated_339_residues MNKPGRAPYVVALLLAASTVLAAAPRLITQEARAANAQEERWLAVAPGRVEPASGLIKLGVPVVGAIQEVLVKPGDSVFA GQALVRLSDAEARAQLASAEAQAAMRKRVRNKETTPSGAGPRRRAEDGVADAQAAVFDARVALDKAVAERRAGRGADADV ESARTQATNAQAKLEQQTEELRKVTADAPLPIGAEGQLNVARADLQAARATLEKLTLRAPLDGTILQVNARAGEIASPQG SQPLVLLGDMSSLRVRAELDQRDLDKIKVGQQAVVRSDAFRGRDVAGKVASVAPLVESSRTAALSQRNMTDVDVVEVLVD LAEPGPFAVGMKVDVYFRP >Mature_339_residues MNKPGRAPYVVALLLAASTVLAAAPRLITQEARAANAQEERWLAVAPGRVEPASGLIKLGVPVVGAIQEVLVKPGDSVFA GQALVRLSDAEARAQLASAEAQAAMRKRVRNKETTPSGAGPRRRAEDGVADAQAAVFDARVALDKAVAERRAGRGADADV ESARTQATNAQAKLEQQTEELRKVTADAPLPIGAEGQLNVARADLQAARATLEKLTLRAPLDGTILQVNARAGEIASPQG SQPLVLLGDMSSLRVRAELDQRDLDKIKVGQQAVVRSDAFRGRDVAGKVASVAPLVESSRTAALSQRNMTDVDVVEVLVD LAEPGPFAVGMKVDVYFRP
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35687; Mature: 35687
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPGRAPYVVALLLAASTVLAAAPRLITQEARAANAQEERWLAVAPGRVEPASGLIKLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEC VPVVGAIQEVLVKPGDSVFAGQALVRLSDAEARAQLASAEAQAAMRKRVRNKETTPSGAG CCHHHHHHHHHHCCCCCEECCHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PRRRAEDGVADAQAAVFDARVALDKAVAERRAGRGADADVESARTQATNAQAKLEQQTEE CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LRKVTADAPLPIGAEGQLNVARADLQAARATLEKLTLRAPLDGTILQVNARAGEIASPQG HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCC SQPLVLLGDMSSLRVRAELDQRDLDKIKVGQQAVVRSDAFRGRDVAGKVASVAPLVESSR CCCEEEEECCCHHEEEECCCHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH TAALSQRNMTDVDVVEVLVDLAEPGPFAVGMKVDVYFRP HHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECC >Mature Secondary Structure MNKPGRAPYVVALLLAASTVLAAAPRLITQEARAANAQEERWLAVAPGRVEPASGLIKLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEC VPVVGAIQEVLVKPGDSVFAGQALVRLSDAEARAQLASAEAQAAMRKRVRNKETTPSGAG CCHHHHHHHHHHCCCCCEECCHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PRRRAEDGVADAQAAVFDARVALDKAVAERRAGRGADADVESARTQATNAQAKLEQQTEE CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LRKVTADAPLPIGAEGQLNVARADLQAARATLEKLTLRAPLDGTILQVNARAGEIASPQG HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCC SQPLVLLGDMSSLRVRAELDQRDLDKIKVGQQAVVRSDAFRGRDVAGKVASVAPLVESSR CCCEEEEECCCHHEEEECCCHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH TAALSQRNMTDVDVVEVLVDLAEPGPFAVGMKVDVYFRP HHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA