| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ttuD [H]
Identifier: 146338077
GI number: 146338077
Start: 1031151
End: 1032431
Strand: Reverse
Name: ttuD [H]
Synonym: BRADO0973
Alternate gene names: 146338077
Gene position: 1032431-1031151 (Counterclockwise)
Preceding gene: 146338078
Following gene: 146338075
Centisome position: 13.85
GC content: 71.74
Gene sequence:
>1281_bases ATGATCGACCGCCGTCCACTGTTGCGTGCCATCTTCGACGCCGCCGTCGCCGCGGCCCATCCCGACGTGGTGCTGCCTGC GTTCCTGCCGGCGTCGCCCAAGGGACGGATCATCTGCCTCGCCGCTGGCAAGGGCGCGGCGGCGATGGCGGTGGCGGCGG AGCGACATTACTTGGACACGCTGGGGGTCGATCCGGCGAAGCTCGTCGGCATTGCGACCACCCGCCATGGCCATGGCGTG CCGACCCGCCGCGTCAAGGTGATCGAGGCCGGCCACCCGATGCCGGACGAGGCCGGACTGAAGGCCGCCGACGACACCCT GCAATTGGCGGCGACCGCCCAAGCCGACGATCTGATGCTGGTGTTGATCTCCGGCGGCGGCTCCGCCAACTGGGTCGCGC CGGCGCATGGCGTCAGCTTCGCGCAGAAGCAGCAGCTGACGCGGGCGCTGCTGCGCTCGGGCGCGCCGATCGGCGAGATG AACATCGTCCGCAAGCATCTGTCGCGGATCAAGGGCGGTCGGCTGGCGCGGGCGGGTCAGAAGGCCGAGATCGTCACGCT GGCGATCTCCGACGTACCGCATGACGATCCCTCCGCCATCGCCTCCGGGCCGACGGTGCCGGATCCGACGACGCTGGCGG ATGCCCGCGCGATCGTCGCCAAATACAGGCTTGAGGTCGACCCGGCGATCGCGCGGGCGCTCGACGATGCCGCCAATGAG AGCTGCAAGCCCGGCGACCCCGCCTTCGCCCGCGCCTCGTTCGAGCTGATCGCGCGCCCGGCGAGCTCGCTCGCGGCTGC CGTGGCCGCCGTGAAGGCCGCCGGCTACGACGTGCTCGACCTCGGCGCCGATCTCGAAGGCGAGGCCCGAGAGGTCGCCG CCGATCACGCCAAGCTGGCACGCGAGGCCCGTTCGCTCGGCCGCCGCATGGCGATCATTTCCGGCGGCGAGCTCACGGTG ACCGTCCGCGGCCAGGGCCGCGGCGGGCCGAACCAGGAATATGCGCTCGCGCTCGCCGACCTGCTCCAGGACATGGACGG CGTCGCGGCGCTGGCCGGCGACACCGACGGCGCCGATGGCGGCGGCGGCAGCGCCTCCGATCCGGCCGGCGCGCTGGTCG ATGCCGAGGTCATCGCGGCGATGCGGGTCCAGAAGCTCGATCCGCCGGCCTATCTCGCCAACAACGACGCCACCGCCTTC TTCGCGGCCACCGGCGGTCTGCTGCAGACCGGCCCGACGCTGACCAACGTCAACGACGTCAGGGTGATCCTGGTCGAGTG A
Upstream 100 bases:
>100_bases CCGGCGCGAACATGGCCCCGCAGGCTCGACCTGCGGGGTTTGCCTTCTTCATCTTGGCCGGGCTAAGGAGACGAGACGCC TCCAGCCTTGCAGGAATTCG
Downstream 100 bases:
>100_bases GGGCGCCACCCCTTCAGAACTCCTCCGCGATCTTGGTCAGCATCGCCAGCAGCGTCTCGCGCCCATCCGGGCCGAGCAGC TCGTTCAGCCGCGCCTCGTG
Product: putative hydroxypyruvate reductase glycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MIDRRPLLRAIFDAAVAAAHPDVVLPAFLPASPKGRIICLAAGKGAAAMAVAAERHYLDTLGVDPAKLVGIATTRHGHGV PTRRVKVIEAGHPMPDEAGLKAADDTLQLAATAQADDLMLVLISGGGSANWVAPAHGVSFAQKQQLTRALLRSGAPIGEM NIVRKHLSRIKGGRLARAGQKAEIVTLAISDVPHDDPSAIASGPTVPDPTTLADARAIVAKYRLEVDPAIARALDDAANE SCKPGDPAFARASFELIARPASSLAAAVAAVKAAGYDVLDLGADLEGEAREVAADHAKLAREARSLGRRMAIISGGELTV TVRGQGRGGPNQEYALALADLLQDMDGVAALAGDTDGADGGGGSASDPAGALVDAEVIAAMRVQKLDPPAYLANNDATAF FAATGGLLQTGPTLTNVNDVRVILVE
Sequences:
>Translated_426_residues MIDRRPLLRAIFDAAVAAAHPDVVLPAFLPASPKGRIICLAAGKGAAAMAVAAERHYLDTLGVDPAKLVGIATTRHGHGV PTRRVKVIEAGHPMPDEAGLKAADDTLQLAATAQADDLMLVLISGGGSANWVAPAHGVSFAQKQQLTRALLRSGAPIGEM NIVRKHLSRIKGGRLARAGQKAEIVTLAISDVPHDDPSAIASGPTVPDPTTLADARAIVAKYRLEVDPAIARALDDAANE SCKPGDPAFARASFELIARPASSLAAAVAAVKAAGYDVLDLGADLEGEAREVAADHAKLAREARSLGRRMAIISGGELTV TVRGQGRGGPNQEYALALADLLQDMDGVAALAGDTDGADGGGGSASDPAGALVDAEVIAAMRVQKLDPPAYLANNDATAF FAATGGLLQTGPTLTNVNDVRVILVE >Mature_426_residues MIDRRPLLRAIFDAAVAAAHPDVVLPAFLPASPKGRIICLAAGKGAAAMAVAAERHYLDTLGVDPAKLVGIATTRHGHGV PTRRVKVIEAGHPMPDEAGLKAADDTLQLAATAQADDLMLVLISGGGSANWVAPAHGVSFAQKQQLTRALLRSGAPIGEM NIVRKHLSRIKGGRLARAGQKAEIVTLAISDVPHDDPSAIASGPTVPDPTTLADARAIVAKYRLEVDPAIARALDDAANE SCKPGDPAFARASFELIARPASSLAAAVAAVKAAGYDVLDLGADLEGEAREVAADHAKLAREARSLGRRMAIISGGELTV TVRGQGRGGPNQEYALALADLLQDMDGVAALAGDTDGADGGGGSASDPAGALVDAEVIAAMRVQKLDPPAYLANNDATAF FAATGGLLQTGPTLTNVNDVRVILVE
Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]
COG id: COG2379
COG function: function code G; Putative glycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543063, Length=488, Percent_Identity=32.9918032786885, Blast_Score=169, Evalue=5e-42, Organism=Caenorhabditis elegans, GI193205461, Length=466, Percent_Identity=26.3948497854077, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI19920578, Length=496, Percent_Identity=28.8306451612903, Blast_Score=129, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007835 [H]
Pfam domain/function: PF05161 MOFRL [H]
EC number: =1.1.1.81 [H]
Molecular weight: Translated: 43592; Mature: 43592
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDRRPLLRAIFDAAVAAAHPDVVLPAFLPASPKGRIICLAAGKGAAAMAVAAERHYLDT CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCEEHHHHHHHHHHHH LGVDPAKLVGIATTRHGHGVPTRRVKVIEAGHPMPDEAGLKAADDTLQLAATAQADDLML CCCCHHHEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEE VLISGGGSANWVAPAHGVSFAQKQQLTRALLRSGAPIGEMNIVRKHLSRIKGGRLARAGQ EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEECCCC KAEIVTLAISDVPHDDPSAIASGPTVPDPTTLADARAIVAKYRLEVDPAIARALDDAANE CCEEEEEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC SCKPGDPAFARASFELIARPASSLAAAVAAVKAAGYDVLDLGADLEGEAREVAADHAKLA CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHH REARSLGRRMAIISGGELTVTVRGQGRGGPNQEYALALADLLQDMDGVAALAGDTDGADG HHHHHHCCEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCC GGGSASDPAGALVDAEVIAAMRVQKLDPPAYLANNDATAFFAATGGLLQTGPTLTNVNDV CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCEECCCCCCCCCCE RVILVE EEEEEC >Mature Secondary Structure MIDRRPLLRAIFDAAVAAAHPDVVLPAFLPASPKGRIICLAAGKGAAAMAVAAERHYLDT CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCEEHHHHHHHHHHHH LGVDPAKLVGIATTRHGHGVPTRRVKVIEAGHPMPDEAGLKAADDTLQLAATAQADDLML CCCCHHHEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEE VLISGGGSANWVAPAHGVSFAQKQQLTRALLRSGAPIGEMNIVRKHLSRIKGGRLARAGQ EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEECCCC KAEIVTLAISDVPHDDPSAIASGPTVPDPTTLADARAIVAKYRLEVDPAIARALDDAANE CCEEEEEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC SCKPGDPAFARASFELIARPASSLAAAVAAVKAAGYDVLDLGADLEGEAREVAADHAKLA CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHH REARSLGRRMAIISGGELTVTVRGQGRGGPNQEYALALADLLQDMDGVAALAGDTDGADG HHHHHHCCEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCC GGGSASDPAGALVDAEVIAAMRVQKLDPPAYLANNDATAFFAATGGLLQTGPTLTNVNDV CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCEECCCCCCCCCCE RVILVE EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]