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The map label for this gene is ybgC [C]

Identifier: 146338070

GI number: 146338070

Start: 1024190

End: 1024609

Strand: Direct

Name: ybgC [C]

Synonym: BRADO0965

Alternate gene names: 146338070

Gene position: 1024190-1024609 (Clockwise)

Preceding gene: 146338069

Following gene: 146338071

Centisome position: 13.74

GC content: 60.71

Gene sequence:

>420_bases
ATGTTCGTCAACCGTCGCGACGTGCAAATCCAGTGGGGTGACTGCGATCCCGCCAATATCGTTTACTACCCGCGCTACTT
CGCGATGTTCGATGATGCAACCTCGGTCATGTTCGAGGCGGCCGGCTTCTCCAAGCAGGACATCGTCCGCCGCTACGGGC
TGGTCGGCATCCCCATGGTTGACACCCGCGCCAAGTTCTACATCCCCTCGACCTATGGCGACTGGATCACGATCGAAAGC
CGGGTCGAGAGCATCAAGCGCTCGTCCTTCGACGTCACCCACAAGGTGTTCAAGGGCGAGGCGCTTGCGATCGAGGGTTT
CGAGACGCGGGTGCTGGTCGGGCGCGATCCGGCCGATCCGGACAAGTTGAAATCGGCGCCATTTCCGGAGGAGATGCGGG
CGAAATTCCTCGGCGAATGA

Upstream 100 bases:

>100_bases
GCGCAGCGTGCCCACCGCCGCTGGAAATGGTGGGCACGGCGCTGAGCGCCTTTGCCCACCCTACGGACCGCCATCGGCGA
TGCAGTGAGGCTTCCAAGAC

Downstream 100 bases:

>100_bases
GGCGAAGGAATGGGTGCGACACGCGGCGGTCTTAAGGATGTTCAGCTGTCGTGCTTTGGTCGGATGGAGAGGCGTGATCT
TCTCGTGTTCAATGCTATGA

Product: putative 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MFVNRRDVQIQWGDCDPANIVYYPRYFAMFDDATSVMFEAAGFSKQDIVRRYGLVGIPMVDTRAKFYIPSTYGDWITIES
RVESIKRSSFDVTHKVFKGEALAIEGFETRVLVGRDPADPDKLKSAPFPEEMRAKFLGE

Sequences:

>Translated_139_residues
MFVNRRDVQIQWGDCDPANIVYYPRYFAMFDDATSVMFEAAGFSKQDIVRRYGLVGIPMVDTRAKFYIPSTYGDWITIES
RVESIKRSSFDVTHKVFKGEALAIEGFETRVLVGRDPADPDKLKSAPFPEEMRAKFLGE
>Mature_139_residues
MFVNRRDVQIQWGDCDPANIVYYPRYFAMFDDATSVMFEAAGFSKQDIVRRYGLVGIPMVDTRAKFYIPSTYGDWITIES
RVESIKRSSFDVTHKVFKGEALAIEGFETRVLVGRDPADPDKLKSAPFPEEMRAKFLGE

Specific function: Hydrolyzes 4-hydroxybenzoate-CoA, and to a lesser extent benzoyl-CoA and 4-chlorobenzoate-CoA. Not active against aliphatic acyl-CoA thioesters, including palmitoyl-CoA, hexanoyl-CoA and acetyl-CoA [H]

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008272
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: =3.1.2.23 [H]

Molecular weight: Translated: 15933; Mature: 15933

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVNRRDVQIQWGDCDPANIVYYPRYFAMFDDATSVMFEAAGFSKQDIVRRYGLVGIPMV
CCCCCCEEEEEECCCCCCCEEECCEEEEEECCHHHHHHHHCCCCHHHHHHHHCCCCCCEE
DTRAKFYIPSTYGDWITIESRVESIKRSSFDVTHKVFKGEALAIEGFETRVLVGRDPADP
CCCEEEEECCCCCCEEEEHHHHHHHHHCCCCHHHHHHCCCEEEEECCEEEEEEECCCCCH
DKLKSAPFPEEMRAKFLGE
HHCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MFVNRRDVQIQWGDCDPANIVYYPRYFAMFDDATSVMFEAAGFSKQDIVRRYGLVGIPMV
CCCCCCEEEEEECCCCCCCEEECCEEEEEECCHHHHHHHHCCCCHHHHHHHHCCCCCCEE
DTRAKFYIPSTYGDWITIESRVESIKRSSFDVTHKVFKGEALAIEGFETRVLVGRDPADP
CCCEEEEECCCCCCEEEEHHHHHHHHHCCCCHHHHHHCCCEEEEECCEEEEEEECCCCCH
DKLKSAPFPEEMRAKFLGE
HHCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1351742; 1610806; 9837940 [H]