Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146338064

Identifier: 146338064

GI number: 146338064

Start: 1018197

End: 1018676

Strand: Direct

Name: 146338064

Synonym: BRADO0959

Alternate gene names: NA

Gene position: 1018197-1018676 (Clockwise)

Preceding gene: 146338063

Following gene: 146338066

Centisome position: 13.66

GC content: 65.21

Gene sequence:

>480_bases
ATGACCGCGCCCGTTCTCGAAACCCGCTATGTCTTCACCCTCACCGTGATGATCGGCGCCGTCACCTCGGCCGGCGAGAC
CGGCATCGGCGTGCGCCGGATCATCCCGATCCATGGCGGCGAGGTGAAGGGCCCCGGCCTGAACGGCGAGGGCGTCAGCG
GCCGGATCTGCGATTTCGGCGCCGACTTCCAGGTCATCCGGCCGAGCGAGCTGATCGACCTCGAAGCCAAATACGGCTTC
GAGACCGACGACGGCGCGACGATCTATGTCGAGAACCGCGGCATCCGCTTCGGGCCGATCGACCTCTTGCAGAAGCTCAA
GCGCGGCGAGCCGGTGGAGCCTGCGCTGATCTACTTCCGCACCCACCCGCGCTTTGAGACCGGCCATGACAAATATCGTT
GGCTGATGGAGCACGTCTTCGTCGGCTCCGCCGCCAGGCATGCCGATCGCGTCATCATCGACGTGCATGTGGTGCTGTAG

Upstream 100 bases:

>100_bases
AGGGCGTGCTGCCCTTTGTCGCCACCGACCTGATCCGCCTGGTGATCCTGATCGCCTTCCCGCTGCTCGCCACCTGGCTG
CCGCAACAGATGATGAACCG

Downstream 100 bases:

>100_bases
GTCGGGCTGTCTGCCTCACACTCCCTCATTGCGAGCGCAGCGAAGCAATCCAGGGCCGGGGCGGGACTTAAGATTGCGTC
TTGGCGGATGTCATCGGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MTAPVLETRYVFTLTVMIGAVTSAGETGIGVRRIIPIHGGEVKGPGLNGEGVSGRICDFGADFQVIRPSELIDLEAKYGF
ETDDGATIYVENRGIRFGPIDLLQKLKRGEPVEPALIYFRTHPRFETGHDKYRWLMEHVFVGSAARHADRVIIDVHVVL

Sequences:

>Translated_159_residues
MTAPVLETRYVFTLTVMIGAVTSAGETGIGVRRIIPIHGGEVKGPGLNGEGVSGRICDFGADFQVIRPSELIDLEAKYGF
ETDDGATIYVENRGIRFGPIDLLQKLKRGEPVEPALIYFRTHPRFETGHDKYRWLMEHVFVGSAARHADRVIIDVHVVL
>Mature_158_residues
TAPVLETRYVFTLTVMIGAVTSAGETGIGVRRIIPIHGGEVKGPGLNGEGVSGRICDFGADFQVIRPSELIDLEAKYGFE
TDDGATIYVENRGIRFGPIDLLQKLKRGEPVEPALIYFRTHPRFETGHDKYRWLMEHVFVGSAARHADRVIIDVHVVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0311 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR020915 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17604; Mature: 17473

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPVLETRYVFTLTVMIGAVTSAGETGIGVRRIIPIHGGEVKGPGLNGEGVSGRICDFG
CCCCCCCHHHHHHHEEHHHHHCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCCEEEECC
ADFQVIRPSELIDLEAKYGFETDDGATIYVENRGIRFGPIDLLQKLKRGEPVEPALIYFR
CCEEEECCCCEEEEECCCCCCCCCCCEEEEECCCCEECHHHHHHHHHCCCCCCCEEEEEE
THPRFETGHDKYRWLMEHVFVGSAARHADRVIIDVHVVL
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure 
TAPVLETRYVFTLTVMIGAVTSAGETGIGVRRIIPIHGGEVKGPGLNGEGVSGRICDFG
CCCCCCHHHHHHHEEHHHHHCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCCEEEECC
ADFQVIRPSELIDLEAKYGFETDDGATIYVENRGIRFGPIDLLQKLKRGEPVEPALIYFR
CCEEEECCCCEEEEECCCCCCCCCCCEEEEECCCCEECHHHHHHHHHCCCCCCCEEEEEE
THPRFETGHDKYRWLMEHVFVGSAARHADRVIIDVHVVL
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA