| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ykgJ [C]
Identifier: 146338054
GI number: 146338054
Start: 1010564
End: 1010896
Strand: Reverse
Name: ykgJ [C]
Synonym: BRADO0949
Alternate gene names: 146338054
Gene position: 1010896-1010564 (Counterclockwise)
Preceding gene: 146338055
Following gene: 146338049
Centisome position: 13.56
GC content: 68.17
Gene sequence:
>333_bases ATGTCTGAGCCGACCTCCGAGCCCCTGTCCGGCGAAACCGACAACAGCCCGTGTCAAAGCTGCGGCGCCTGCTGCGCCTA TTCAGCGAACTGGCCACGCTTCACGATCGAGGAGGATGCCGCGCTGGATCTGATCCCGGCCGAGCTGGTGAATGAGCGGC TCTCGGGGATGCGCTGCGACGGCGACCGCTGCTGCGCGCTGGACGGCGAGATCGCCCGTGCCGTCGCCTGCCGGATCTAC GCGATCCGCCCCGACGTGTGCCGGACCTGCATGCCGGGCGACGATGAATGCGCGATGGCGCGGCGCAAGTTCGGACTGCC TGTGCTCAGCTGA
Upstream 100 bases:
>100_bases CGCGTCGTCGAGGCGACGTATCTGGACGACAAATATCCTGAAAGGCGCGAGGCGCTGCGCGCCAAATGGCGGCGCAGCCT GGTCTGGGAGGTGCCGAAGG
Downstream 100 bases:
>100_bases GAATGCGGCTCAGACGGTGACGGGGGCGAGATCGTCGTCGAGATCGTCATCCAGCGGCGCCACCGCCGACAACGGCTTTG TGGACAACGAGATGGGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSEPTSEPLSGETDNSPCQSCGACCAYSANWPRFTIEEDAALDLIPAELVNERLSGMRCDGDRCCALDGEIARAVACRIY AIRPDVCRTCMPGDDECAMARRKFGLPVLS
Sequences:
>Translated_110_residues MSEPTSEPLSGETDNSPCQSCGACCAYSANWPRFTIEEDAALDLIPAELVNERLSGMRCDGDRCCALDGEIARAVACRIY AIRPDVCRTCMPGDDECAMARRKFGLPVLS >Mature_109_residues SEPTSEPLSGETDNSPCQSCGACCAYSANWPRFTIEEDAALDLIPAELVNERLSGMRCDGDRCCALDGEIARAVACRIYA IRPDVCRTCMPGDDECAMARRKFGLPVLS
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11912; Mature: 11780
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 13.6 %Cys+Met (Translated Protein) 10.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 12.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPTSEPLSGETDNSPCQSCGACCAYSANWPRFTIEEDAALDLIPAELVNERLSGMRCD CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCC GDRCCALDGEIARAVACRIYAIRPDVCRTCMPGDDECAMARRKFGLPVLS CCCEEECCHHHHHHHHHHHEEECHHHHHHCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure SEPTSEPLSGETDNSPCQSCGACCAYSANWPRFTIEEDAALDLIPAELVNERLSGMRCD CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCC GDRCCALDGEIARAVACRIYAIRPDVCRTCMPGDDECAMARRKFGLPVLS CCCEEECCHHHHHHHHHHHEEECHHHHHHCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA