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The map label for this gene is dppC [H]

Identifier: 146337999

GI number: 146337999

Start: 942349

End: 943248

Strand: Reverse

Name: dppC [H]

Synonym: BRADO0892

Alternate gene names: 146337999

Gene position: 943248-942349 (Counterclockwise)

Preceding gene: 146338000

Following gene: 146337998

Centisome position: 12.65

GC content: 68.89

Gene sequence:

>900_bases
ATGACCGCAATGGCTGATCTTGTTCTCTCCGGTCCGATCATCGCATCGCCATCACGATGGCGCAGCGCGCTCGCGCGCGG
CGGCGCGCGGCTGTGGATCGGTGGTCTGATCGTCGCGCTGCTGCTGCTGATCGCGCTGTCCGCTCCCGTCATCGCCCCGC
ACGATCCCACTGAGCAGGATCTGATGTCGGCCCAGCTGCCGCCGGCCTTCATCCGCGGCGGCGAGAGCGCATTTCCTCTG
GGCACCGACAGCCTCGGCCGCTGCGTGCTGTCGCGGCTGATATACTCGGCGCGCACCGCGGTCTCGGTGGCACTCATCGC
CTCGCTGCTTGCAGCGCTCATCGGCGTCGTGCTCGGCCTGATCGCCGGCGCCTTCGGCGGCTTGCCCGATCAACTGGTGT
CGCGGATGATCGACGTCTGGATGGCGTTCCCGCCGGTGCTGCTGTCGATCGTGCTCGCCGCCGTGATCGGCGCCGGCCTC
ACCTCCGTCATCGCCGCGATCGTCGTGGTCGACTGGACCCGCTTTGCCCGCATCGTCCGGGCCGAAACCCAGGCCCAGCT
CGCGCGCGACTACGCGGCTGCGGCGCGCGTGCTTGGTCTCACCCGCGCGCAGGCGCTGCGGCTGGAGATCCTGCCCAATC
TCATCCCGCTGATCGTCACGCTCCTCGCCGTCGAGATGGGCATCGCGATCCTGGTCGAGGTCATCCTGTCCTTCGTCGGC
ATCTCCGTCACCGGCGACACCGCGAGCTGGGGCGGCATGATCACCGAGGGCCGCCAGATCGTCTATCAGGCGCCCTGGAT
CATGGCGCTGCCGATCGCGGCCGTCATCGTCAGTGTCATCGGCTTCAACCTGTTCGGCGACGGCCTGCGCGCCGCGCTCG
ACCCGGTGCAACGCCGATGA

Upstream 100 bases:

>100_bases
TGATCCAGGGGCTGATCCTGACCTTTGCCGTGCTCTTCATCGCCCTCAACCTCGCCGTCGACCTGCTGGTGGCGCTGCTC
GATCCGCGACTGCGCCATGG

Downstream 100 bases:

>100_bases
GCGCCATCCTCGAGATCGACAACCTTCACGTCGCGATCGGCGCCGCCAATGTGCTGCGCGGCGTCTCCCTGCGCGTCGAG
GCCGGCGAGGTGCGCGGCCT

Product: peptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTAMADLVLSGPIIASPSRWRSALARGGARLWIGGLIVALLLLIALSAPVIAPHDPTEQDLMSAQLPPAFIRGGESAFPL
GTDSLGRCVLSRLIYSARTAVSVALIASLLAALIGVVLGLIAGAFGGLPDQLVSRMIDVWMAFPPVLLSIVLAAVIGAGL
TSVIAAIVVVDWTRFARIVRAETQAQLARDYAAAARVLGLTRAQALRLEILPNLIPLIVTLLAVEMGIAILVEVILSFVG
ISVTGDTASWGGMITEGRQIVYQAPWIMALPIAAVIVSVIGFNLFGDGLRAALDPVQRR

Sequences:

>Translated_299_residues
MTAMADLVLSGPIIASPSRWRSALARGGARLWIGGLIVALLLLIALSAPVIAPHDPTEQDLMSAQLPPAFIRGGESAFPL
GTDSLGRCVLSRLIYSARTAVSVALIASLLAALIGVVLGLIAGAFGGLPDQLVSRMIDVWMAFPPVLLSIVLAAVIGAGL
TSVIAAIVVVDWTRFARIVRAETQAQLARDYAAAARVLGLTRAQALRLEILPNLIPLIVTLLAVEMGIAILVEVILSFVG
ISVTGDTASWGGMITEGRQIVYQAPWIMALPIAAVIVSVIGFNLFGDGLRAALDPVQRR
>Mature_298_residues
TAMADLVLSGPIIASPSRWRSALARGGARLWIGGLIVALLLLIALSAPVIAPHDPTEQDLMSAQLPPAFIRGGESAFPLG
TDSLGRCVLSRLIYSARTAVSVALIASLLAALIGVVLGLIAGAFGGLPDQLVSRMIDVWMAFPPVLLSIVLAAVIGAGLT
SVIAAIVVVDWTRFARIVRAETQAQLARDYAAAARVLGLTRAQALRLEILPNLIPLIVTLLAVEMGIAILVEVILSFVGI
SVTGDTASWGGMITEGRQIVYQAPWIMALPIAAVIVSVIGFNLFGDGLRAALDPVQRR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=260, Percent_Identity=33.0769230769231, Blast_Score=160, Evalue=8e-41,
Organism=Escherichia coli, GI1789964, Length=258, Percent_Identity=37.984496124031, Blast_Score=154, Evalue=9e-39,
Organism=Escherichia coli, GI1787054, Length=260, Percent_Identity=36.1538461538462, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1787549, Length=243, Percent_Identity=34.9794238683128, Blast_Score=140, Evalue=8e-35,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=36.6255144032922, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1787498, Length=285, Percent_Identity=31.2280701754386, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1788505, Length=220, Percent_Identity=30.9090909090909, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31290; Mature: 31159

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAMADLVLSGPIIASPSRWRSALARGGARLWIGGLIVALLLLIALSAPVIAPHDPTEQD
CCHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
LMSAQLPPAFIRGGESAFPLGTDSLGRCVLSRLIYSARTAVSVALIASLLAALIGVVLGL
HHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGAFGGLPDQLVSRMIDVWMAFPPVLLSIVLAAVIGAGLTSVIAAIVVVDWTRFARIVR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AETQAQLARDYAAAARVLGLTRAQALRLEILPNLIPLIVTLLAVEMGIAILVEVILSFVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ISVTGDTASWGGMITEGRQIVYQAPWIMALPIAAVIVSVIGFNLFGDGLRAALDPVQRR
CCCCCCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAMADLVLSGPIIASPSRWRSALARGGARLWIGGLIVALLLLIALSAPVIAPHDPTEQD
CHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
LMSAQLPPAFIRGGESAFPLGTDSLGRCVLSRLIYSARTAVSVALIASLLAALIGVVLGL
HHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGAFGGLPDQLVSRMIDVWMAFPPVLLSIVLAAVIGAGLTSVIAAIVVVDWTRFARIVR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AETQAQLARDYAAAARVLGLTRAQALRLEILPNLIPLIVTLLAVEMGIAILVEVILSFVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ISVTGDTASWGGMITEGRQIVYQAPWIMALPIAAVIVSVIGFNLFGDGLRAALDPVQRR
CCCCCCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]