| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is thiE [H]
Identifier: 146337902
GI number: 146337902
Start: 832772
End: 833137
Strand: Direct
Name: thiE [H]
Synonym: BRADO0790
Alternate gene names: 146337902
Gene position: 832772-833137 (Clockwise)
Preceding gene: 146337901
Following gene: 146337903
Centisome position: 11.17
GC content: 64.21
Gene sequence:
>366_bases ATGCCTTTCGATCTTCGCCTTTATGCCATCGTCGATCCCGAGCAGGCGCGCGGCCGCGACCTCGCGGATCTCGCGCGCCG TTGTGTCGAAGGCGGCGCGACCCTTGTGCAGCTCCGCGACAAACGTAGTAGTAAAGGCGCGTTCGTCGAACAGGCGCGTG CGATCAAAAGCGCGCTCGCGCCGCATGGCGCACAACTCATCATTAATGACCGCATCGATGTCGTCCTGGACTCCGGCGCC GACGGCGTGCATATCGGCCCGGATGACATAACAGCCGAGGACACCGCCGCGTGCTCGGTCCCCGTGCAATCATCGGCCTG TCGATCAAATCGACGGCCGAAGCCGAGGCAGCCCCTGTGGCCCTGA
Upstream 100 bases:
>100_bases CGCTCCATCAATGGCACGAGCGCCGAGGATGCATCCATGAAGATGGGAAGCCACTTATGTCTGGGAGTCCTCCTCGGCCC CTCCCGCGCGCCACCTGTCC
Downstream 100 bases:
>100_bases TTGATTACGCGGGGTGCGGCGGTGTCTTGCCAGTTCGTCAAAGGAACAGCAGCAAGCGCCGATCGGCCTCGACGGCCTTG CGCGCATCCTCGCGGTCTTG
Product: putative thiamine-phosphate diphosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MPFDLRLYAIVDPEQARGRDLADLARRCVEGGATLVQLRDKRSSKGAFVEQARAIKSALAPHGAQLIINDRIDVVLDSGA DGVHIGPDDITAEDTAACSVPVQSSACRSNRRPKPRQPLWP
Sequences:
>Translated_121_residues MPFDLRLYAIVDPEQARGRDLADLARRCVEGGATLVQLRDKRSSKGAFVEQARAIKSALAPHGAQLIINDRIDVVLDSGA DGVHIGPDDITAEDTAACSVPVQSSACRSNRRPKPRQPLWP >Mature_120_residues PFDLRLYAIVDPEQARGRDLADLARRCVEGGATLVQLRDKRSSKGAFVEQARAIKSALAPHGAQLIINDRIDVVLDSGAD GVHIGPDDITAEDTAACSVPVQSSACRSNRRPKPRQPLWP
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 13098; Mature: 12967
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFDLRLYAIVDPEQARGRDLADLARRCVEGGATLVQLRDKRSSKGAFVEQARAIKSALA CCCCEEEEEEECCHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHC PHGAQLIINDRIDVVLDSGADGVHIGPDDITAEDTAACSVPVQSSACRSNRRPKPRQPLW CCCCEEEECCCEEEEEECCCCCEEECCCCCCCCCCCEECCCCCCHHHHHCCCCCCCCCCC P C >Mature Secondary Structure PFDLRLYAIVDPEQARGRDLADLARRCVEGGATLVQLRDKRSSKGAFVEQARAIKSALA CCCEEEEEEECCHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHC PHGAQLIINDRIDVVLDSGADGVHIGPDDITAEDTAACSVPVQSSACRSNRRPKPRQPLW CCCCEEEECCCEEEEEECCCCCEEECCCCCCCCCCCEECCCCCCHHHHHCCCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA