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The map label for this gene is ctpA [H]

Identifier: 146337570

GI number: 146337570

Start: 436005

End: 437264

Strand: Reverse

Name: ctpA [H]

Synonym: BRADO0425

Alternate gene names: 146337570

Gene position: 437264-436005 (Counterclockwise)

Preceding gene: 146337571

Following gene: 146337569

Centisome position: 5.86

GC content: 65.48

Gene sequence:

>1260_bases
ATGGGATCGACCGCGCGCGCCGCGACCTCCGATACCTATCGCCAGCTCAACCTGTTCGGCGACGTGTTCGAGCGGGTGCG
CAGCGACTACGTCGAGAAGCCCGACGATTCGAAGCTCGTCGAATCCGCGATCAGCGGCATGCTGTCCGGTCTCGATCCGC
ATTCGAGCTACATGGATGCGAAGAGCTTCCGCGACATGCAGGTGCAGACCCGCGGCGAGTTCGGCGGCCTCGGCATCGAG
GTCACCATGGAAGACGGCCTGATCAAGGTGGTGTCGCCGATCGACGACACGCCGGCATCAAAGGCCGGCATCCTCGCGAA
CGACATCATCACCAATCTCGACGACGAGGCCGTGCAGGGCCTGACCCTCAACCAGGCCGTCGAGAAGATGCGCGGTCCGG
TCGGCACCAAGATCAAGCTGAAGGTCGTGCGCAAGGGCACCGACAATCCGCTCGACATCACGCTCACGCGCGACAACATC
CGGGTCCGTTCGGTGCGCTCGCGTCCCGAGGGCGACGACATCGCCTATATCCGCATCACCACCTTCAACGAGCAGACCAC
CGAGGGTCTGAAGAAGAGCATCGCCGATCTGCAGACCTCGATCGGTGACAAGCTGAAGGGCTACATCATCGACCTGCGCA
ACAATCCGGGCGGCCTGCTCGAGGAGGCGGTCACCGTCTCCGACGCGTTCCTGGAGCGCGGCGAGATCGTGTCGACCCGC
GGTCGCAATGCGGAGGAAACGCAGCGCCGTGCGGCGCATGCCGGCGACCTCACCAAGGGCAAGCCGGTCATCGTGCTGAT
CAACGGCGGCTCGGCCTCCGCGTCTGAGATCGTGGCCGGCGCGCTGCAGGACCACAAGCGCGCGACGCTGGTCGGCACGC
GCTCGTTCGGCAAGGGCTCGGTGCAGACCATCATTCCGCTGGGCGCCGGCAACGGCGCGCTGCGCCTGACCACCGCGCGC
TACTACACGCCGTCAGGCAAATCGATCCAGGCCAAGGGCATCGTGCCGGACATCGAGGTCCTGCAGGATGTGCCGGAGGA
GCTGAAGTCCCGCACCGACACCAAGGGCGAGGCCTCGCTGCGCGGCCATCTGAAGAACGATGGTGACGAGAAGACCGGCT
CGCAGTCCTACGTGCCGCCGGATGCCAAGGACGACAAGGCGCTCAAGATGGCGGCCGACCTGCTGCACGGCATCAAGAAC
AGCGCCAACACGCCGGCGCCGACCGAGAAGGCCTCTGCTGACAAGCCCAAGGCAAACTGA

Upstream 100 bases:

>100_bases
AAAAGGTACGCGGATGATGCGTAAGACTTCGGTAATTCTCCTGAGCGCGGCCACCGGTGCGGCATTGACCTTGTTCGTGA
CGCAACCGCGCGCAGTGTTG

Downstream 100 bases:

>100_bases
AAAGGCAAACTGAAAAGGCAAACTGAGCGGGCGAACTGAGCAGGTCGGCTGATCGGGCACAGGTCTATTCGCATTCGGTT
TGAGGGGCGGCCTTAGGGCC

Product: carboxy-terminal-processing protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MGSTARAATSDTYRQLNLFGDVFERVRSDYVEKPDDSKLVESAISGMLSGLDPHSSYMDAKSFRDMQVQTRGEFGGLGIE
VTMEDGLIKVVSPIDDTPASKAGILANDIITNLDDEAVQGLTLNQAVEKMRGPVGTKIKLKVVRKGTDNPLDITLTRDNI
RVRSVRSRPEGDDIAYIRITTFNEQTTEGLKKSIADLQTSIGDKLKGYIIDLRNNPGGLLEEAVTVSDAFLERGEIVSTR
GRNAEETQRRAAHAGDLTKGKPVIVLINGGSASASEIVAGALQDHKRATLVGTRSFGKGSVQTIIPLGAGNGALRLTTAR
YYTPSGKSIQAKGIVPDIEVLQDVPEELKSRTDTKGEASLRGHLKNDGDEKTGSQSYVPPDAKDDKALKMAADLLHGIKN
SANTPAPTEKASADKPKAN

Sequences:

>Translated_419_residues
MGSTARAATSDTYRQLNLFGDVFERVRSDYVEKPDDSKLVESAISGMLSGLDPHSSYMDAKSFRDMQVQTRGEFGGLGIE
VTMEDGLIKVVSPIDDTPASKAGILANDIITNLDDEAVQGLTLNQAVEKMRGPVGTKIKLKVVRKGTDNPLDITLTRDNI
RVRSVRSRPEGDDIAYIRITTFNEQTTEGLKKSIADLQTSIGDKLKGYIIDLRNNPGGLLEEAVTVSDAFLERGEIVSTR
GRNAEETQRRAAHAGDLTKGKPVIVLINGGSASASEIVAGALQDHKRATLVGTRSFGKGSVQTIIPLGAGNGALRLTTAR
YYTPSGKSIQAKGIVPDIEVLQDVPEELKSRTDTKGEASLRGHLKNDGDEKTGSQSYVPPDAKDDKALKMAADLLHGIKN
SANTPAPTEKASADKPKAN
>Mature_418_residues
GSTARAATSDTYRQLNLFGDVFERVRSDYVEKPDDSKLVESAISGMLSGLDPHSSYMDAKSFRDMQVQTRGEFGGLGIEV
TMEDGLIKVVSPIDDTPASKAGILANDIITNLDDEAVQGLTLNQAVEKMRGPVGTKIKLKVVRKGTDNPLDITLTRDNIR
VRSVRSRPEGDDIAYIRITTFNEQTTEGLKKSIADLQTSIGDKLKGYIIDLRNNPGGLLEEAVTVSDAFLERGEIVSTRG
RNAEETQRRAAHAGDLTKGKPVIVLINGGSASASEIVAGALQDHKRATLVGTRSFGKGSVQTIIPLGAGNGALRLTTARY
YTPSGKSIQAKGIVPDIEVLQDVPEELKSRTDTKGEASLRGHLKNDGDEKTGSQSYVPPDAKDDKALKMAADLLHGIKNS
ANTPAPTEKASADKPKAN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=320, Percent_Identity=30.625, Blast_Score=126, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 44898; Mature: 44767

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSTARAATSDTYRQLNLFGDVFERVRSDYVEKPDDSKLVESAISGMLSGLDPHSSYMDA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
KSFRDMQVQTRGEFGGLGIEVTMEDGLIKVVSPIDDTPASKAGILANDIITNLDDEAVQG
HHHCCCEEEECCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHCC
LTLNQAVEKMRGPVGTKIKLKVVRKGTDNPLDITLTRDNIRVRSVRSRPEGDDIAYIRIT
CHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCEEEEEEE
TFNEQTTEGLKKSIADLQTSIGDKLKGYIIDLRNNPGGLLEEAVTVSDAFLERGEIVSTR
ECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEECC
GRNAEETQRRAAHAGDLTKGKPVIVLINGGSASASEIVAGALQDHKRATLVGTRSFGKGS
CCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC
VQTIIPLGAGNGALRLTTARYYTPSGKSIQAKGIVPDIEVLQDVPEELKSRTDTKGEASL
EEEEEEECCCCCEEEEEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHH
RGHLKNDGDEKTGSQSYVPPDAKDDKALKMAADLLHGIKNSANTPAPTEKASADKPKAN
HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GSTARAATSDTYRQLNLFGDVFERVRSDYVEKPDDSKLVESAISGMLSGLDPHSSYMDA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
KSFRDMQVQTRGEFGGLGIEVTMEDGLIKVVSPIDDTPASKAGILANDIITNLDDEAVQG
HHHCCCEEEECCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHCC
LTLNQAVEKMRGPVGTKIKLKVVRKGTDNPLDITLTRDNIRVRSVRSRPEGDDIAYIRIT
CHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCEEEEEEE
TFNEQTTEGLKKSIADLQTSIGDKLKGYIIDLRNNPGGLLEEAVTVSDAFLERGEIVSTR
ECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEECC
GRNAEETQRRAAHAGDLTKGKPVIVLINGGSASASEIVAGALQDHKRATLVGTRSFGKGS
CCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC
VQTIIPLGAGNGALRLTTARYYTPSGKSIQAKGIVPDIEVLQDVPEELKSRTDTKGEASL
EEEEEEECCCCCEEEEEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHH
RGHLKNDGDEKTGSQSYVPPDAKDDKALKMAADLLHGIKNSANTPAPTEKASADKPKAN
HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]