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The map label for this gene is yraN [C]

Identifier: 146337346

GI number: 146337346

Start: 191255

End: 191680

Strand: Direct

Name: yraN [C]

Synonym: BRADO0179

Alternate gene names: 146337346

Gene position: 191255-191680 (Clockwise)

Preceding gene: 146337345

Following gene: 146337347

Centisome position: 2.56

GC content: 69.95

Gene sequence:

>426_bases
ATGGCGGAGACTGACCGCGCCACCGACAAGCCCGCCGGAGCGCCAAAGCCTGCGAAGACCGCCTCGCCGGAGCGGGTCGC
CGCGTTCCGCACCGGCCTGTCGGCCGAGGCGCGCGCGGCAGCGCTGCTGATCGCCAAGGGATATCGCATCCTCGCCAAAC
GCTTCCGCACGCCACATGGCGAGATCGACCTGATCGCGCGCAAGCGCGGCCTGGTCGCCTTCGTGGAGGTCAAGGCGCGC
GCCTCGCTCGACGACGCCGCCTATGCGGTGACGCCGCGCCAGCAGCAGCGCATCATCGATGCCGCGCAGGCCTGGCTGAT
GGCGCATCCCGACCATGCCGAATTGGAGCTGCGCTTCGACGCGATTCTTGTTGCCCCGCGTAGCCTGCCGCGCCATCTCA
TGGCAGCCTTCGATGCCAGCCCCTGA

Upstream 100 bases:

>100_bases
AAGGATGCGGTGATGCACGCGGTCGAGCTGTCGCGCCGGCCGCGGCGCGAGGTCTATGCGCGGGCGCTCGCGCTCGCCAA
GGAGACCCGAGGAGAGGGCG

Downstream 100 bases:

>100_bases
CACGAGCCACACGAGACATACCGGAATCTGCCCATGAAACTGAATGTCGCCGTCCAGATGGACCCCATCGCGCGCATCAA
CATCCGCGGCGACTCGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MAETDRATDKPAGAPKPAKTASPERVAAFRTGLSAEARAAALLIAKGYRILAKRFRTPHGEIDLIARKRGLVAFVEVKAR
ASLDDAAYAVTPRQQQRIIDAAQAWLMAHPDHAELELRFDAILVAPRSLPRHLMAAFDASP

Sequences:

>Translated_141_residues
MAETDRATDKPAGAPKPAKTASPERVAAFRTGLSAEARAAALLIAKGYRILAKRFRTPHGEIDLIARKRGLVAFVEVKAR
ASLDDAAYAVTPRQQQRIIDAAQAWLMAHPDHAELELRFDAILVAPRSLPRHLMAAFDASP
>Mature_140_residues
AETDRATDKPAGAPKPAKTASPERVAAFRTGLSAEARAAALLIAKGYRILAKRFRTPHGEIDLIARKRGLVAFVEVKARA
SLDDAAYAVTPRQQQRIIDAAQAWLMAHPDHAELELRFDAILVAPRSLPRHLMAAFDASP

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=112, Percent_Identity=34.8214285714286, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y179_BRASO (A4YJR8)

Other databases:

- EMBL:   CU234118
- RefSeq:   YP_001202394.1
- ProteinModelPortal:   A4YJR8
- STRING:   A4YJR8
- GeneID:   5116618
- GenomeReviews:   CU234118_GR
- KEGG:   bra:BRADO0179
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   QRYDIVA
- ProtClustDB:   PRK12497
- BioCyc:   BSP376:BRADO0179-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 15332; Mature: 15201

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETDRATDKPAGAPKPAKTASPERVAAFRTGLSAEARAAALLIAKGYRILAKRFRTPHG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
EIDLIARKRGLVAFVEVKARASLDDAAYAVTPRQQQRIIDAAQAWLMAHPDHAELELRFD
CEEEEEECCCCEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEE
AILVAPRSLPRHLMAAFDASP
EEEECCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
AETDRATDKPAGAPKPAKTASPERVAAFRTGLSAEARAAALLIAKGYRILAKRFRTPHG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
EIDLIARKRGLVAFVEVKARASLDDAAYAVTPRQQQRIIDAAQAWLMAHPDHAELELRFD
CEEEEEECCCCEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEE
AILVAPRSLPRHLMAAFDASP
EEEECCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA