| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ada [H]
Identifier: 146337323
GI number: 146337323
Start: 168384
End: 169283
Strand: Direct
Name: ada [H]
Synonym: BRADO0154
Alternate gene names: 146337323
Gene position: 168384-169283 (Clockwise)
Preceding gene: 146337322
Following gene: 146337334
Centisome position: 2.26
GC content: 70.33
Gene sequence:
>900_bases ATGATGACCCTCGCCATTCACGATTCCGCCCTGGCCAAGCCGGGCCCGCAACAATCCGCCGCGCTGCGCGACTACGATGC AGTGCGCCGCGCGATCGCGTTCATCTCCGAGCACTGGCGCCGGCAGCCGACCATCGAGGACATGGCCGACGCCGCCAGCC TGACGCCGGACGAGCTGCACCATCTGTTCCGGCGCTGGGCCGGGCTGACGCCGAAGGCGTTCATGCAGGCGCTGACGCTC GACCACGCCAAGGGCCTGCTGAAGGGCTCGGCCAGCGTGCTCGACGCCGCGCTCGACTCCGGCCTGTCGGGTCCCGGCCG CCTGCACGATCTGTTCGTCACCCACGAGGCGATGTCTCCCGGCGAATGGAAGACCGGCGGCGCCGGCACCACCTTGCGCT ACGGCTTCCATCCCTGCCCGTTCGGCATGGCGCTGGTCATGGCCACCCCGCGCGGCCTCGCCGGCCTGGCCTTCGCCGAC CCCGGCGAGGAGGCTGGCGCGCTCGCCGACATGAAGAGCCGCTGGCCCCGCGCCACTTACGTCGAGGACGTCCCCGGCAC CGCGGCGCTCGCGCAGCGCATCTTCGACAAGAACCACTGGCGCCCCGAGCAACCCTTACGCGTCGTCCTGATCGGCACCG ATTTCGAGGTCCGCGTCTGGGAAGCCCTGCTCAAGATCCCCATGGGCCGCGCCGTCTGCTACTCGGACATCGCGACAAGG CTGGAGTCACCGAAGGCCTCGCGCGCGGTCGGCGCGGCGGTGGGCAAGAACCCGATCTCGTTCGTGGTCCCGTGCCATCG CGCGCTGGGGAAGACGGGCGCGTTGACAGGGTATCATTGGGGCCTCACGCGCAAGCAGGCGATGATCGGGTGGGAGGCTG GGCAGGTGGGGATGGGGTAG
Upstream 100 bases:
>100_bases TGAGGCCCGGAAAAACGCCGCGCGACCGCCCGCGCCACCCCTAGCCCCCCAATCAGAAATCGGGTGGAGTGCCCTCCCCG GCCGCCCTACATCCGGACTC
Downstream 100 bases:
>100_bases GCGTATCTACAATGCGCTATCTGGGTGACGTAGGCTGCGTTGAACGAGCCTTCCGAACTCGCCTGGCGGCGTGAACCCGA TCGTACAGGCATCGCTCTAT
Product: putative methylated-DNA--protein-cysteine methyltransferase
Products: NA
Alternate protein names: Regulatory protein of adaptative response; O-6-methylguanine-DNA alkyltransferase [H]
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MMTLAIHDSALAKPGPQQSAALRDYDAVRRAIAFISEHWRRQPTIEDMADAASLTPDELHHLFRRWAGLTPKAFMQALTL DHAKGLLKGSASVLDAALDSGLSGPGRLHDLFVTHEAMSPGEWKTGGAGTTLRYGFHPCPFGMALVMATPRGLAGLAFAD PGEEAGALADMKSRWPRATYVEDVPGTAALAQRIFDKNHWRPEQPLRVVLIGTDFEVRVWEALLKIPMGRAVCYSDIATR LESPKASRAVGAAVGKNPISFVVPCHRALGKTGALTGYHWGLTRKQAMIGWEAGQVGMG
Sequences:
>Translated_299_residues MMTLAIHDSALAKPGPQQSAALRDYDAVRRAIAFISEHWRRQPTIEDMADAASLTPDELHHLFRRWAGLTPKAFMQALTL DHAKGLLKGSASVLDAALDSGLSGPGRLHDLFVTHEAMSPGEWKTGGAGTTLRYGFHPCPFGMALVMATPRGLAGLAFAD PGEEAGALADMKSRWPRATYVEDVPGTAALAQRIFDKNHWRPEQPLRVVLIGTDFEVRVWEALLKIPMGRAVCYSDIATR LESPKASRAVGAAVGKNPISFVVPCHRALGKTGALTGYHWGLTRKQAMIGWEAGQVGMG >Mature_299_residues MMTLAIHDSALAKPGPQQSAALRDYDAVRRAIAFISEHWRRQPTIEDMADAASLTPDELHHLFRRWAGLTPKAFMQALTL DHAKGLLKGSASVLDAALDSGLSGPGRLHDLFVTHEAMSPGEWKTGGAGTTLRYGFHPCPFGMALVMATPRGLAGLAFAD PGEEAGALADMKSRWPRATYVEDVPGTAALAQRIFDKNHWRPEQPLRVVLIGTDFEVRVWEALLKIPMGRAVCYSDIATR LESPKASRAVGAAVGKNPISFVVPCHRALGKTGALTGYHWGLTRKQAMIGWEAGQVGMG
Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus. It activates the transcription of alkA, alkB and aidB [H]
COG id: COG0350
COG function: function code L; Methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788542, Length=254, Percent_Identity=29.5275590551181, Blast_Score=131, Evalue=5e-32, Organism=Escherichia coli, GI1787596, Length=78, Percent_Identity=50, Blast_Score=85, Evalue=7e-18, Organism=Caenorhabditis elegans, GI115533070, Length=84, Percent_Identity=41.6666666666667, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI115533068, Length=84, Percent_Identity=41.6666666666667, Blast_Score=84, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6320001, Length=83, Percent_Identity=44.578313253012, Blast_Score=86, Evalue=5e-18, Organism=Drosophila melanogaster, GI17137554, Length=175, Percent_Identity=29.7142857142857, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004026 - InterPro: IPR016221 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 - InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF02805 Ada_Zn_binding; PF01035 DNA_binding_1; PF00165 HTH_AraC; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 32312; Mature: 32312
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS01124 HTH_ARAC_FAMILY_2 ; PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTLAIHDSALAKPGPQQSAALRDYDAVRRAIAFISEHWRRQPTIEDMADAASLTPDELH CEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHH HLFRRWAGLTPKAFMQALTLDHAKGLLKGSASVLDAALDSGLSGPGRLHDLFVTHEAMSP HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEECCCCCC GEWKTGGAGTTLRYGFHPCPFGMALVMATPRGLAGLAFADPGEEAGALADMKSRWPRATY CCCCCCCCCCEEECCCCCCCHHHEEEHCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCC VEDVPGTAALAQRIFDKNHWRPEQPLRVVLIGTDFEVRVWEALLKIPMGRAVCYSDIATR CCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHH LESPKASRAVGAAVGKNPISFVVPCHRALGKTGALTGYHWGLTRKQAMIGWEAGQVGMG HCCCCHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCEECCCCHHHHHEECCCCCCCCC >Mature Secondary Structure MMTLAIHDSALAKPGPQQSAALRDYDAVRRAIAFISEHWRRQPTIEDMADAASLTPDELH CEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHH HLFRRWAGLTPKAFMQALTLDHAKGLLKGSASVLDAALDSGLSGPGRLHDLFVTHEAMSP HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEECCCCCC GEWKTGGAGTTLRYGFHPCPFGMALVMATPRGLAGLAFADPGEEAGALADMKSRWPRATY CCCCCCCCCCEEECCCCCCCHHHEEEHCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCC VEDVPGTAALAQRIFDKNHWRPEQPLRVVLIGTDFEVRVWEALLKIPMGRAVCYSDIATR CCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHH LESPKASRAVGAAVGKNPISFVVPCHRALGKTGALTGYHWGLTRKQAMIGWEAGQVGMG HCCCCHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCEECCCCHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2987251; 3887409; 9097040; 9278503; 2982792; 3536913; 3009022; 3529081; 1581309; 8202360; 8500619; 8156986 [H]