Click here to switch to the map view.

The map label for this gene is yiiZ [H]

Identifier: 146337291

GI number: 146337291

Start: 132868

End: 133839

Strand: Direct

Name: yiiZ [H]

Synonym: BRADO0118

Alternate gene names: 146337291

Gene position: 132868-133839 (Clockwise)

Preceding gene: 146337283

Following gene: 146337292

Centisome position: 1.78

GC content: 64.81

Gene sequence:

>972_bases
ATGAAGACAATCACAGGTATCATTGCAGCCGCCGTGCTGGCGGTCACGTCGCCGCTGGCGATGGCGCGGGATTTCCGCTC
CGCCGACGTGCACCCCGCCGACTATCCGACCGTCGAAGCCGTCAAGTTCATGGGCAAGCAGCTCGCGGCCGCGAGCGGCG
GCAAGCTCGGCGTCAAGGTGTTCCCGAACGGCGCCCTGGGCTCGGAAAAGGACACGATCGAGCAGCTCAAGATCGGCGCG
CTCGACATGATGCGGATCAACTCGTCCCCGCTCAACAATTTCGTGCCCGAGACCGTCGCGCTGTGCCTGCCTTTCGTGTT
CCGCGACACGCAGCACATGCGCACCGTCCTGGACGGCCCGATCGGCGACGAGATCCTGGCCGCCATGGAGCCAGCCGGCC
TGATCGGCCTCGCCTACTATGACAGCGGCGCGCGTTCGATCTACACCGTCAAGGCGCCGGTCAAGTCGCTGGCCGACCTC
AAGGGCCTGAAGATCCGCGTGCAGCAGTCCGACCTTTGGGTCGGCATGATCCAGAGCCTCGGCGCCAACCCGACGCCGAT
GCCCTACGGCGAGGTCTACACCGCGCTCAAGACCGGCCTCGTCGACGCCGCCGAGAACAACTGGCCGTCCTATGAATCCT
CGCGCCATTTCGAGGCCGCCAAGTTCTACAACATCACCGAGCACTCGCTCGCTCCGGAAGTCCTCGTGATGTCCAAGAAG
GTCTGGGACACCCTGAGCAAGGACGACCAGGCGATGATCCGCAAGGCGGCCAAGGAGTCGGTGCCGGTCATGCGCAAGCT
CTGGGACGAGCGCGAAGAGGCCTCCCGCAAGGCCGTCGAGGCCGCCGGCGTCCAGGTCATCACGGTCGCCAACAAGCAGG
AATTCGTCGACGCGATGAAGCCGGTCTACCAGAAGTTCGCCGGCGACGAGAAGCTCTCGAGCCTCGTCAAGCGCATCCAG
GACACGAAGTAA

Upstream 100 bases:

>100_bases
GAGGCTGGCGCTTGATCTCGCGGCATTTGCGGTGGAGCGACCCAAGTCGGCCCGCAGACTCTGCTCAACGACGACAAAAT
CACACCAGGAGGAAGCTCAG

Downstream 100 bases:

>100_bases
GCGCCACGAAGTAAGCTCCACCAAGTCACAGCACCAACTCAAAACGACGACGGCCGGCTCCGGCGTCGCCACCAGGCGAC
GCCGGATGACCGCAGGGGAG

Product: putative TRAP-type C4-dicarboxylate transport system binding periplasmic protein DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKTITGIIAAAVLAVTSPLAMARDFRSADVHPADYPTVEAVKFMGKQLAAASGGKLGVKVFPNGALGSEKDTIEQLKIGA
LDMMRINSSPLNNFVPETVALCLPFVFRDTQHMRTVLDGPIGDEILAAMEPAGLIGLAYYDSGARSIYTVKAPVKSLADL
KGLKIRVQQSDLWVGMIQSLGANPTPMPYGEVYTALKTGLVDAAENNWPSYESSRHFEAAKFYNITEHSLAPEVLVMSKK
VWDTLSKDDQAMIRKAAKESVPVMRKLWDEREEASRKAVEAAGVQVITVANKQEFVDAMKPVYQKFAGDEKLSSLVKRIQ
DTK

Sequences:

>Translated_323_residues
MKTITGIIAAAVLAVTSPLAMARDFRSADVHPADYPTVEAVKFMGKQLAAASGGKLGVKVFPNGALGSEKDTIEQLKIGA
LDMMRINSSPLNNFVPETVALCLPFVFRDTQHMRTVLDGPIGDEILAAMEPAGLIGLAYYDSGARSIYTVKAPVKSLADL
KGLKIRVQQSDLWVGMIQSLGANPTPMPYGEVYTALKTGLVDAAENNWPSYESSRHFEAAKFYNITEHSLAPEVLVMSKK
VWDTLSKDDQAMIRKAAKESVPVMRKLWDEREEASRKAVEAAGVQVITVANKQEFVDAMKPVYQKFAGDEKLSSLVKRIQ
DTK
>Mature_323_residues
MKTITGIIAAAVLAVTSPLAMARDFRSADVHPADYPTVEAVKFMGKQLAAASGGKLGVKVFPNGALGSEKDTIEQLKIGA
LDMMRINSSPLNNFVPETVALCLPFVFRDTQHMRTVLDGPIGDEILAAMEPAGLIGLAYYDSGARSIYTVKAPVKSLADL
KGLKIRVQQSDLWVGMIQSLGANPTPMPYGEVYTALKTGLVDAAENNWPSYESSRHFEAAKFYNITEHSLAPEVLVMSKK
VWDTLSKDDQAMIRKAAKESVPVMRKLWDEREEASRKAVEAAGVQVITVANKQEFVDAMKPVYQKFAGDEKLSSLVKRIQ
DTK

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=301, Percent_Identity=35.5481727574751, Blast_Score=180, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 35251; Mature: 35251

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTITGIIAAAVLAVTSPLAMARDFRSADVHPADYPTVEAVKFMGKQLAAASGGKLGVKV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE
FPNGALGSEKDTIEQLKIGALDMMRINSSPLNNFVPETVALCLPFVFRDTQHMRTVLDGP
CCCCCCCCCHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCC
IGDEILAAMEPAGLIGLAYYDSGARSIYTVKAPVKSLADLKGLKIRVQQSDLWVGMIQSL
CCHHHHHHCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHCCCCEEEEECCHHHHHHHHHC
GANPTPMPYGEVYTALKTGLVDAAENNWPSYESSRHFEAAKFYNITEHSLAPEVLVMSKK
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHCCHHHHHHHHH
VWDTLSKDDQAMIRKAAKESVPVMRKLWDEREEASRKAVEAAGVQVITVANKQEFVDAMK
HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHH
PVYQKFAGDEKLSSLVKRIQDTK
HHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTITGIIAAAVLAVTSPLAMARDFRSADVHPADYPTVEAVKFMGKQLAAASGGKLGVKV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE
FPNGALGSEKDTIEQLKIGALDMMRINSSPLNNFVPETVALCLPFVFRDTQHMRTVLDGP
CCCCCCCCCHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCC
IGDEILAAMEPAGLIGLAYYDSGARSIYTVKAPVKSLADLKGLKIRVQQSDLWVGMIQSL
CCHHHHHHCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHCCCCEEEEECCHHHHHHHHHC
GANPTPMPYGEVYTALKTGLVDAAENNWPSYESSRHFEAAKFYNITEHSLAPEVLVMSKK
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHCCHHHHHHHHH
VWDTLSKDDQAMIRKAAKESVPVMRKLWDEREEASRKAVEAAGVQVITVANKQEFVDAMK
HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHH
PVYQKFAGDEKLSSLVKRIQDTK
HHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]