| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is phoH [H]
Identifier: 146337216
GI number: 146337216
Start: 47946
End: 48983
Strand: Direct
Name: phoH [H]
Synonym: BRADO0042
Alternate gene names: 146337216
Gene position: 47946-48983 (Clockwise)
Preceding gene: 146337215
Following gene: 146337217
Centisome position: 0.64
GC content: 66.96
Gene sequence:
>1038_bases TTGCCCAAGAGCGCATCGGACTCATCTTCCCTCGCTCCCAGCCGCAAGTTCGACCGCGACATGTCCATGCCCCCCGAAAC CCAGGTCGTCATCGATTTCGACGACAATCGTGCCGCCTCCGCGCTGGTCGGCCCCTACGGCCAGAACCTCGCGCTGGTCG AGCGCCGCCTCGGCGTCGTCGTGGACTCGCGCGGCAACCACATCACCATCGGCGGCAGCCGGGATGGCTGCGACGCGGCG CGACGCGTGCTGGAGTCGCTGTATGCCCAGGCCATCAAGGGCCAGGATCTCTCGCAAGGCGACGTCGACGGCGCGATCCG CGCCGTTGTCGCGCAGGGCTCGCTGTTCGAGTTCGACGCCAAGAACGGCAAGAACGCGTTCGAGAGCATCAATCTGCGCA AGCGCCCGGTGCGCGCCCGCACGGCTGCGCAGGATTCCTACATCCGCGCGCTGAAGCGTCATGAGCTCGTGTTCGGCATC GGCCCGGCGGGCACCGGCAAGACCTGGCTCGCGGTGGCGCACGCCGCGCAGCTGTTCGAGCGCAAGGAAGTCGACCGCAT CATCCTGTCGCGCCCCGCGGTCGAAGCCGGCGAGCGGCTTGGCTTCCTGCCCGGCGACCTGCGCGAGAAGGTCGACCCGT ATCTGCGTCCGATCTACGACGCGCTGTACGATCTGATGGATGCGCGTGTCGTCGAGCGCGCGCTGCAGGCCAATGAGATC GAGATCGCGCCGCTCGCCTTCATGCGCGGCCGCACTTTGACCAACGCGGCGATCATTCTCGACGAGGCGCAGAATACGAC CTCGATGCAGATGAAGATGTTCCTGACGCGTCTCGGCGAGAACAGCCGCATGATCATCACCGGCGATCCATCTCAGGTCG ACCTGCCGAATGGCCAGACGTCGGGGCTGGCCGAAGCCGCGCGCCTGCTCGATGGCGTCGAGGGCATCGCCCAGGTCAGG TTCACCGGTGAGGACGTCATTCGCCACGAATTGGTGGCGCGCATCGTTGCGGCCTATGAGGGCCCGCAGGCCCGCTGA
Upstream 100 bases:
>100_bases AGTCTCGAGCGCTACAGCCTGCTCGGCGAGCTCGTGGCGACGACAGCGGCTCCGATTCCCGAAGCCGCCATGCCCCTCGC GTCCATCGGAGGCTGAGCAC
Downstream 100 bases:
>100_bases TCCCCGGAGCACGCCGATGGGCGCGCGATGCCAGCGCCATTCGCACAGAACTCGACCAGGATGCCACAAAGTCCCATTCC GATCACCGAGGTCATTGTCG
Product: putative phosphate starvation-inducible protein, PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MPKSASDSSSLAPSRKFDRDMSMPPETQVVIDFDDNRAASALVGPYGQNLALVERRLGVVVDSRGNHITIGGSRDGCDAA RRVLESLYAQAIKGQDLSQGDVDGAIRAVVAQGSLFEFDAKNGKNAFESINLRKRPVRARTAAQDSYIRALKRHELVFGI GPAGTGKTWLAVAHAAQLFERKEVDRIILSRPAVEAGERLGFLPGDLREKVDPYLRPIYDALYDLMDARVVERALQANEI EIAPLAFMRGRTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIITGDPSQVDLPNGQTSGLAEAARLLDGVEGIAQVR FTGEDVIRHELVARIVAAYEGPQAR
Sequences:
>Translated_345_residues MPKSASDSSSLAPSRKFDRDMSMPPETQVVIDFDDNRAASALVGPYGQNLALVERRLGVVVDSRGNHITIGGSRDGCDAA RRVLESLYAQAIKGQDLSQGDVDGAIRAVVAQGSLFEFDAKNGKNAFESINLRKRPVRARTAAQDSYIRALKRHELVFGI GPAGTGKTWLAVAHAAQLFERKEVDRIILSRPAVEAGERLGFLPGDLREKVDPYLRPIYDALYDLMDARVVERALQANEI EIAPLAFMRGRTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIITGDPSQVDLPNGQTSGLAEAARLLDGVEGIAQVR FTGEDVIRHELVARIVAAYEGPQAR >Mature_344_residues PKSASDSSSLAPSRKFDRDMSMPPETQVVIDFDDNRAASALVGPYGQNLALVERRLGVVVDSRGNHITIGGSRDGCDAAR RVLESLYAQAIKGQDLSQGDVDGAIRAVVAQGSLFEFDAKNGKNAFESINLRKRPVRARTAAQDSYIRALKRHELVFGIG PAGTGKTWLAVAHAAQLFERKEVDRIILSRPAVEAGERLGFLPGDLREKVDPYLRPIYDALYDLMDARVVERALQANEIE IAPLAFMRGRTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIITGDPSQVDLPNGQTSGLAEAARLLDGVEGIAQVRF TGEDVIRHELVARIVAAYEGPQAR
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=316, Percent_Identity=46.5189873417722, Blast_Score=276, Evalue=2e-75, Organism=Escherichia coli, GI1787257, Length=206, Percent_Identity=49.5145631067961, Blast_Score=212, Evalue=2e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 37657; Mature: 37526
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKSASDSSSLAPSRKFDRDMSMPPETQVVIDFDDNRAASALVGPYGQNLALVERRLGVV CCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCHHHHHHHHCEE VDSRGNHITIGGSRDGCDAARRVLESLYAQAIKGQDLSQGDVDGAIRAVVAQGSLFEFDA EECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEC KNGKNAFESINLRKRPVRARTAAQDSYIRALKRHELVFGIGPAGTGKTWLAVAHAAQLFE CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHH RKEVDRIILSRPAVEAGERLGFLPGDLREKVDPYLRPIYDALYDLMDARVVERALQANEI HHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE EIAPLAFMRGRTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIITGDPSQVDLPNGQT EEEHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCC SGLAEAARLLDGVEGIAQVRFTGEDVIRHELVARIVAAYEGPQAR CHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PKSASDSSSLAPSRKFDRDMSMPPETQVVIDFDDNRAASALVGPYGQNLALVERRLGVV CCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCHHHHHHHHCEE VDSRGNHITIGGSRDGCDAARRVLESLYAQAIKGQDLSQGDVDGAIRAVVAQGSLFEFDA EECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEC KNGKNAFESINLRKRPVRARTAAQDSYIRALKRHELVFGIGPAGTGKTWLAVAHAAQLFE CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHH RKEVDRIILSRPAVEAGERLGFLPGDLREKVDPYLRPIYDALYDLMDARVVERALQANEI HHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE EIAPLAFMRGRTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIITGDPSQVDLPNGQT EEEHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCC SGLAEAARLLDGVEGIAQVRFTGEDVIRHELVARIVAAYEGPQAR CHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]