| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302782
Identifier: 146302782
GI number: 146302782
Start: 6095541
End: 6096350
Strand: Reverse
Name: 146302782
Synonym: Fjoh_5055
Alternate gene names: NA
Gene position: 6096350-6095541 (Counterclockwise)
Preceding gene: 146302783
Following gene: 146302781
Centisome position: 99.99
GC content: 31.11
Gene sequence:
>810_bases ATGAAAAAAAATGTTTTTGCCATTCTTTTAGTTTCAGTATTGTTTTCTTGTAAAGATGCTAAACAAGAAAAAACGGCAGA TAAAGCCGTAGTTGTCAAAGATTCAGTTGTTAAAACTGAGGAAAGTGAAAGTACAGCCGTTACAGAAGAAGTCTTTAAAA ATGAATTCGATATTTTAATACCCCAAACGTATCGAACTTATGATAACCAAAATCCTGTAAAAGCTTTAAACCAAAAATGG GTTGAGTTGTACGAGGAAAATGGAGAATTTTTTTTAGGAAAAGCAAATTTTAAAATTGAAAAAGGATACAGTGAATGTTC AGGCGATTCTACGCTTTCTATTATGCCTGAAAAAAAGGTGCTGCTTTTAATGGACGATCCTAAATTGAAAACCGGAAAAA TAAAATCGCTGAAAATTGAAAGAGATAAAATCTGGCCCAAAGAAAAAATGAGTTTTACTTTTAATAATGTCAATTATACT TTACGCGGAGAAGGAAAAGTTTTATCTGAAGAAAAAGTAAGCACAGATGATGATAAAATTGAAATCTTTAAAAAAGTAGA AGATTATAAATTATACTTAACCATTGGTAATAATCCTGAAAAACTGATTTTGACCGAAGCATCTTTTAATGACACCTTTG TGGAGTTTCTTTTTGCAGGAGATATTGACGGCGACGGAAAACTCGACTTTGTTTTTGGAGCAAACAGAGATTATGAAGAA GAGCGTGTGATTTTATTTCTTTCGTCAAAAGCTGAAAATGAAAATTCAGTAAAAAAAGTTTCAGAAATAGCAGTACAATT TGACTGCTAA
Upstream 100 bases:
>100_bases AAATTATATAGAAAATCAGGATTTGAATATTTAGACGCTCCGTTAGGTTGCACCGGGCATAATTCCTGCCCTGTCTGGAT GTTGAAAAAATTATAAGCCA
Downstream 100 bases:
>100_bases CTAACTAAAATATTATCTAATAACAGATATATAAAATGAAAATCAAGCAATATCGTACTCAGTTTATTAAGGAATTATCT TCTTTGTACGATGCGTACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MKKNVFAILLVSVLFSCKDAKQEKTADKAVVVKDSVVKTEESESTAVTEEVFKNEFDILIPQTYRTYDNQNPVKALNQKW VELYEENGEFFLGKANFKIEKGYSECSGDSTLSIMPEKKVLLLMDDPKLKTGKIKSLKIERDKIWPKEKMSFTFNNVNYT LRGEGKVLSEEKVSTDDDKIEIFKKVEDYKLYLTIGNNPEKLILTEASFNDTFVEFLFAGDIDGDGKLDFVFGANRDYEE ERVILFLSSKAENENSVKKVSEIAVQFDC
Sequences:
>Translated_269_residues MKKNVFAILLVSVLFSCKDAKQEKTADKAVVVKDSVVKTEESESTAVTEEVFKNEFDILIPQTYRTYDNQNPVKALNQKW VELYEENGEFFLGKANFKIEKGYSECSGDSTLSIMPEKKVLLLMDDPKLKTGKIKSLKIERDKIWPKEKMSFTFNNVNYT LRGEGKVLSEEKVSTDDDKIEIFKKVEDYKLYLTIGNNPEKLILTEASFNDTFVEFLFAGDIDGDGKLDFVFGANRDYEE ERVILFLSSKAENENSVKKVSEIAVQFDC >Mature_269_residues MKKNVFAILLVSVLFSCKDAKQEKTADKAVVVKDSVVKTEESESTAVTEEVFKNEFDILIPQTYRTYDNQNPVKALNQKW VELYEENGEFFLGKANFKIEKGYSECSGDSTLSIMPEKKVLLLMDDPKLKTGKIKSLKIERDKIWPKEKMSFTFNNVNYT LRGEGKVLSEEKVSTDDDKIEIFKKVEDYKLYLTIGNNPEKLILTEASFNDTFVEFLFAGDIDGDGKLDFVFGANRDYEE ERVILFLSSKAENENSVKKVSEIAVQFDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30771; Mature: 30771
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNVFAILLVSVLFSCKDAKQEKTADKAVVVKDSVVKTEESESTAVTEEVFKNEFDILI CCCCHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCEECCCCCCHHHHHHHHHCCCCEEEE PQTYRTYDNQNPVKALNQKWVELYEENGEFFLGKANFKIEKGYSECSGDSTLSIMPEKKV CCCEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCCCCCEEEECCCCEE LLLMDDPKLKTGKIKSLKIERDKIWPKEKMSFTFNNVNYTLRGEGKVLSEEKVSTDDDKI EEEECCCCCCCCCEEEEEEEHHHCCCCHHCEEEEECEEEEEECCCCEECCCCCCCCCHHH EIFKKVEDYKLYLTIGNNPEKLILTEASFNDTFVEFLFAGDIDGDGKLDFVFGANRDYEE HHEEECCCEEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCC ERVILFLSSKAENENSVKKVSEIAVQFDC CEEEEEEECCCCCCHHHHHHHHEEEEECC >Mature Secondary Structure MKKNVFAILLVSVLFSCKDAKQEKTADKAVVVKDSVVKTEESESTAVTEEVFKNEFDILI CCCCHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCEECCCCCCHHHHHHHHHCCCCEEEE PQTYRTYDNQNPVKALNQKWVELYEENGEFFLGKANFKIEKGYSECSGDSTLSIMPEKKV CCCEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCCCCCEEEECCCCEE LLLMDDPKLKTGKIKSLKIERDKIWPKEKMSFTFNNVNYTLRGEGKVLSEEKVSTDDDKI EEEECCCCCCCCCEEEEEEEHHHCCCCHHCEEEEECEEEEEECCCCEECCCCCCCCCHHH EIFKKVEDYKLYLTIGNNPEKLILTEASFNDTFVEFLFAGDIDGDGKLDFVFGANRDYEE HHEEECCCEEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCC ERVILFLSSKAENENSVKKVSEIAVQFDC CEEEEEEECCCCCCHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA