| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302763
Identifier: 146302763
GI number: 146302763
Start: 6077028
End: 6077615
Strand: Direct
Name: 146302763
Synonym: Fjoh_5036
Alternate gene names: NA
Gene position: 6077028-6077615 (Clockwise)
Preceding gene: 146302762
Following gene: 146302764
Centisome position: 99.67
GC content: 34.18
Gene sequence:
>588_bases ATGAACCCAATTTTAAGCCAAAATCTATTTTTAGTTAAAGAACACATCGGAATGTTTAAAGCCGCAAACAACTATGATAT TTATGATCCAGAAACGAATCAAATTATAATGAACTGCCGAGAAAACAATCTTGGTTTCTTTACTAAAATATTTCGTTTTA CAGATTATAAAAGAGCAACGCCTTTTGACATTGAAATTACAACGGCTTCTGGCGAGAAATTAATTTCTGTAAAAAGAGGA GTTGCCATTTTTCGCTCAACAGTTAAAGTTTTTGACGAGAAAGACAGATTACTTGGAACCTTCAAACAAAAGTTCTTTTC TATTGGCGGTAAATTTGACATCTTAGATAAAAATGAAAGACCGGCTGCAACATTACAGGGAAAATGGACCGGCTGGGATT TTAAATTCTCGCATGAAAACAAACAGCTTGCTCAGGTAAGCAAAAAATGGGCAGGATTAGGTAAAGAGTTTTTTACAAGT GCAGATAATTATGTATTGAAAATTGAAGAAACCGTACCATCAGATAGTCCGCTTAGACAATTAATCCTTGCAGCAGTAAT GTGTATCGACATGGTTCTAAAGGAATAA
Upstream 100 bases:
>100_bases AGCCGAATTTATTCGTCTTGTCGAAACTTCTGAGCAATACAATTAATAAATATTTTATTACATTTGCGCTTTATTCGAAA CACTAATTTTTTACAAACGT
Downstream 100 bases:
>100_bases GAAAGTTGTTAAACTTAGATTAAGAAAACATAAGAAAGCATCATTTTAGCTGGCAAAAGTTTTATTTTTGTTATACTTAA AATGATGCTTTCTGCATTTC
Product: scramblase family protein
Products: NA
Alternate protein names: Scramblase
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MNPILSQNLFLVKEHIGMFKAANNYDIYDPETNQIIMNCRENNLGFFTKIFRFTDYKRATPFDIEITTASGEKLISVKRG VAIFRSTVKVFDEKDRLLGTFKQKFFSIGGKFDILDKNERPAATLQGKWTGWDFKFSHENKQLAQVSKKWAGLGKEFFTS ADNYVLKIEETVPSDSPLRQLILAAVMCIDMVLKE
Sequences:
>Translated_195_residues MNPILSQNLFLVKEHIGMFKAANNYDIYDPETNQIIMNCRENNLGFFTKIFRFTDYKRATPFDIEITTASGEKLISVKRG VAIFRSTVKVFDEKDRLLGTFKQKFFSIGGKFDILDKNERPAATLQGKWTGWDFKFSHENKQLAQVSKKWAGLGKEFFTS ADNYVLKIEETVPSDSPLRQLILAAVMCIDMVLKE >Mature_195_residues MNPILSQNLFLVKEHIGMFKAANNYDIYDPETNQIIMNCRENNLGFFTKIFRFTDYKRATPFDIEITTASGEKLISVKRG VAIFRSTVKVFDEKDRLLGTFKQKFFSIGGKFDILDKNERPAATLQGKWTGWDFKFSHENKQLAQVSKKWAGLGKEFFTS ADNYVLKIEETVPSDSPLRQLILAAVMCIDMVLKE
Specific function: Unknown
COG id: COG4894
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22410; Mature: 22410
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPILSQNLFLVKEHIGMFKAANNYDIYDPETNQIIMNCRENNLGFFTKIFRFTDYKRAT CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCC PFDIEITTASGEKLISVKRGVAIFRSTVKVFDEKDRLLGTFKQKFFSIGGKFDILDKNER CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC PAATLQGKWTGWDFKFSHENKQLAQVSKKWAGLGKEFFTSADNYVLKIEETVPSDSPLRQ CCEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCCCHHHH LILAAVMCIDMVLKE HHHHHHHHHHHHHCC >Mature Secondary Structure MNPILSQNLFLVKEHIGMFKAANNYDIYDPETNQIIMNCRENNLGFFTKIFRFTDYKRAT CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCC PFDIEITTASGEKLISVKRGVAIFRSTVKVFDEKDRLLGTFKQKFFSIGGKFDILDKNER CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC PAATLQGKWTGWDFKFSHENKQLAQVSKKWAGLGKEFFTSADNYVLKIEETVPSDSPLRQ CCEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCCCHHHH LILAAVMCIDMVLKE HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA