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The map label for this gene is ywnB [H]

Identifier: 146302747

GI number: 146302747

Start: 6058418

End: 6059059

Strand: Direct

Name: ywnB [H]

Synonym: Fjoh_5020

Alternate gene names: 146302747

Gene position: 6058418-6059059 (Clockwise)

Preceding gene: 146302746

Following gene: 146302748

Centisome position: 99.37

GC content: 36.76

Gene sequence:

>642_bases
ATGAAAATCGCAATTATTGGAGCAACAGGATTTGTTGGCTCAGCAATTTTAAACGAATTGGCAGACAGAAAACATGATAT
TACAGCTATTGCAAGAAACCCAAAAGACACAGCAAATGTGACATGGAAAAGTGCTGATATATTTAATGTAAATGAATTGG
CAGAAATTTTAAAAGGAAATGATGCTGTTATCAATGCGTATAATTCAGGATGGACAAACCCAAACATTTATGATGATTTT
ATTGCCGGATCAAAAGCCATTCAGGAAGCGGTAAAAAAATCAGGTGTAAAACGTTACATCACAATTGGCGGTGCGGGCAG
TTTATTTGTAGCTCCGGGTTTACAAGCGGTTGACACACCAGATTTTCCAAAAGAATATCACGCAGGTGCTACGGCAGCAA
GAGATTATTTAAATATCCTAAAAGAAGAAAAAGAATTAGACTGGGCATTTTTCAGCCCGGCATTTGAAATGCATCAGGGA
ATTACAACCGGAAGAACAGGAAAATACCGTTTAGGTTTAGAAAATCCTGTTTTTAATGATGAGCAAAGAAGTATTTTATC
TGTAGAGGATTTAGCAGTTGTTATTGCTGATGAAGCAGAAAATCCAAAACACCACCAGGTTAGATTTACAGCGGCTTATT
AA

Upstream 100 bases:

>100_bases
TTAGAAGGAATTTCTTTAGAGGATTTTTCGAACCAATTTTAAAAACTATTTTTTTACCCAAAACTGTAACATTTTTTATT
ACTAAATAAATTTATATATT

Downstream 100 bases:

>100_bases
TTATTTAAAAGGTGCTAAGGTTCTAAGATGCTAAGTTTTATATGATTTTGAGCTGGAAACGCTGCAATACTACTCAAACC
CGACAGGTTTTAAAAACCTG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKIAIIGATGFVGSAILNELADRKHDITAIARNPKDTANVTWKSADIFNVNELAEILKGNDAVINAYNSGWTNPNIYDDF
IAGSKAIQEAVKKSGVKRYITIGGAGSLFVAPGLQAVDTPDFPKEYHAGATAARDYLNILKEEKELDWAFFSPAFEMHQG
ITTGRTGKYRLGLENPVFNDEQRSILSVEDLAVVIADEAENPKHHQVRFTAAY

Sequences:

>Translated_213_residues
MKIAIIGATGFVGSAILNELADRKHDITAIARNPKDTANVTWKSADIFNVNELAEILKGNDAVINAYNSGWTNPNIYDDF
IAGSKAIQEAVKKSGVKRYITIGGAGSLFVAPGLQAVDTPDFPKEYHAGATAARDYLNILKEEKELDWAFFSPAFEMHQG
ITTGRTGKYRLGLENPVFNDEQRSILSVEDLAVVIADEAENPKHHQVRFTAAY
>Mature_213_residues
MKIAIIGATGFVGSAILNELADRKHDITAIARNPKDTANVTWKSADIFNVNELAEILKGNDAVINAYNSGWTNPNIYDDF
IAGSKAIQEAVKKSGVKRYITIGGAGSLFVAPGLQAVDTPDFPKEYHAGATAARDYLNILKEEKELDWAFFSPAFEMHQG
ITTGRTGKYRLGLENPVFNDEQRSILSVEDLAVVIADEAENPKHHQVRFTAAY

Specific function: Unknown

COG id: COG2910

COG function: function code R; Putative NADH-flavin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 23313; Mature: 23313

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAIIGATGFVGSAILNELADRKHDITAIARNPKDTANVTWKSADIFNVNELAEILKGN
CEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHCCC
DAVINAYNSGWTNPNIYDDFIAGSKAIQEAVKKSGVKRYITIGGAGSLFVAPGLQAVDTP
CEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCCC
DFPKEYHAGATAARDYLNILKEEKELDWAFFSPAFEMHQGITTGRTGKYRLGLENPVFND
CCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCCCCCCCCEEEECCCCCCCCC
EQRSILSVEDLAVVIADEAENPKHHQVRFTAAY
CHHCEEEHHHEEEEEECCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKIAIIGATGFVGSAILNELADRKHDITAIARNPKDTANVTWKSADIFNVNELAEILKGN
CEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHCCC
DAVINAYNSGWTNPNIYDDFIAGSKAIQEAVKKSGVKRYITIGGAGSLFVAPGLQAVDTP
CEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCCC
DFPKEYHAGATAARDYLNILKEEKELDWAFFSPAFEMHQGITTGRTGKYRLGLENPVFND
CCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCCCCCCCCEEEECCCCCCCCC
EQRSILSVEDLAVVIADEAENPKHHQVRFTAAY
CHHCEEEHHHEEEEEECCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]