Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302733

Identifier: 146302733

GI number: 146302733

Start: 6044322

End: 6045122

Strand: Direct

Name: 146302733

Synonym: Fjoh_5006

Alternate gene names: NA

Gene position: 6044322-6045122 (Clockwise)

Preceding gene: 146302732

Following gene: 146302734

Centisome position: 99.14

GC content: 36.95

Gene sequence:

>801_bases
ATGAAAAACATACTATACAAAGCTTTCGCTATTGCAGCAATCTCTCTATCATTAATTTCTTGTTCAAGCGATGACAACGA
AGAAGCAGCAGGAAACGGAAATATTACATTAAAATTTGACAACGCTTACGGAACAAACGACCTTATTTTAAACACTCAGG
GAAACACAACTTCTAACAATGAAGTATTAAAAATAAGCCTTGTAAAATATATTGTAAGCAATGTAGTTTTTACAAAAGCT
GACGGAAGCACTTTTACTTACCCAAAAAGCAAAAGCTATTTTATTGCTGACGAATCTACTGCAGCCGGACAGCAGTTTAA
ACTAACAGATATTCCTGCCGGAGATTACGTAAAAGTAAAATTTGGAATTGGAGTTGATGAAGAACAATGGAAATTAGGAG
CTGCTGGTCAGGGAGATTTTCTTGCACAGGCAGATGCTGCAGGTATGATGTGGTCTTGGGCTGCAGGTTACAAATTCTTT
GCTCTTGAAGGAACTTTTACTTCGCCTACTGTTACAACTGCAACTCCATTTATGATTCATACCGGAAAAACTGGAACTGA
CTACAACTATACTGAAGTAACTATAGATTTCCCTACTAAAGCTTTGGTTCGTACTAACATTACTCCTGCTGTTCACATCA
TTACAGATCTTTCTAAAGTTATCGACGGTACAAACAAAATCAAACTTTCTGACAACAACTCAGGCGGAATGGGCGCTATG
ATTATGGGTGGTGCAAACTTACCTTTAATTACTCAAAACTTCAATACTATGTTTAGAGTAGACCACGTACATAACGACTA
A

Upstream 100 bases:

>100_bases
TTATTTCAATTTTATTGAAATCAATTTTCATTGTTTTAAAATCAATGAAAAAGCGTTTACGCATACTTTAAATTTAAATT
TTTATATAAAAATCCTTAAA

Downstream 100 bases:

>100_bases
ATTTATTTTCAGAAGCACAAAAGTTATAGTTCTTAAGAACTCACTTCCCGCTATCCGCTTTATCTTTTGCGTTTGCTGCT
GCAAACACAAAAGGATACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKNILYKAFAIAAISLSLISCSSDDNEEAAGNGNITLKFDNAYGTNDLILNTQGNTTSNNEVLKISLVKYIVSNVVFTKA
DGSTFTYPKSKSYFIADESTAAGQQFKLTDIPAGDYVKVKFGIGVDEEQWKLGAAGQGDFLAQADAAGMMWSWAAGYKFF
ALEGTFTSPTVTTATPFMIHTGKTGTDYNYTEVTIDFPTKALVRTNITPAVHIITDLSKVIDGTNKIKLSDNNSGGMGAM
IMGGANLPLITQNFNTMFRVDHVHND

Sequences:

>Translated_266_residues
MKNILYKAFAIAAISLSLISCSSDDNEEAAGNGNITLKFDNAYGTNDLILNTQGNTTSNNEVLKISLVKYIVSNVVFTKA
DGSTFTYPKSKSYFIADESTAAGQQFKLTDIPAGDYVKVKFGIGVDEEQWKLGAAGQGDFLAQADAAGMMWSWAAGYKFF
ALEGTFTSPTVTTATPFMIHTGKTGTDYNYTEVTIDFPTKALVRTNITPAVHIITDLSKVIDGTNKIKLSDNNSGGMGAM
IMGGANLPLITQNFNTMFRVDHVHND
>Mature_266_residues
MKNILYKAFAIAAISLSLISCSSDDNEEAAGNGNITLKFDNAYGTNDLILNTQGNTTSNNEVLKISLVKYIVSNVVFTKA
DGSTFTYPKSKSYFIADESTAAGQQFKLTDIPAGDYVKVKFGIGVDEEQWKLGAAGQGDFLAQADAAGMMWSWAAGYKFF
ALEGTFTSPTVTTATPFMIHTGKTGTDYNYTEVTIDFPTKALVRTNITPAVHIITDLSKVIDGTNKIKLSDNNSGGMGAM
IMGGANLPLITQNFNTMFRVDHVHND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28683; Mature: 28683

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00878 ODR_DC_2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNILYKAFAIAAISLSLISCSSDDNEEAAGNGNITLKFDNAYGTNDLILNTQGNTTSNN
CCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCC
EVLKISLVKYIVSNVVFTKADGSTFTYPKSKSYFIADESTAAGQQFKLTDIPAGDYVKVK
CEEEEHHHHHHHHCEEEEECCCCEEECCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEE
FGIGVDEEQWKLGAAGQGDFLAQADAAGMMWSWAAGYKFFALEGTFTSPTVTTATPFMIH
ECCCCCHHHEEECCCCCCCEEEECCCCCEEEEECCCEEEEEEECCCCCCEEECCCCEEEE
TGKTGTDYNYTEVTIDFPTKALVRTNITPAVHIITDLSKVIDGTNKIKLSDNNSGGMGAM
CCCCCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEE
IMGGANLPLITQNFNTMFRVDHVHND
EECCCCCCEEECCCCEEEEEEEECCC
>Mature Secondary Structure
MKNILYKAFAIAAISLSLISCSSDDNEEAAGNGNITLKFDNAYGTNDLILNTQGNTTSNN
CCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCC
EVLKISLVKYIVSNVVFTKADGSTFTYPKSKSYFIADESTAAGQQFKLTDIPAGDYVKVK
CEEEEHHHHHHHHCEEEEECCCCEEECCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEE
FGIGVDEEQWKLGAAGQGDFLAQADAAGMMWSWAAGYKFFALEGTFTSPTVTTATPFMIH
ECCCCCHHHEEECCCCCCCEEEECCCCCEEEEECCCEEEEEEECCCCCCEEECCCCEEEE
TGKTGTDYNYTEVTIDFPTKALVRTNITPAVHIITDLSKVIDGTNKIKLSDNNSGGMGAM
CCCCCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEE
IMGGANLPLITQNFNTMFRVDHVHND
EECCCCCCEEECCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA