| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302733
Identifier: 146302733
GI number: 146302733
Start: 6044322
End: 6045122
Strand: Direct
Name: 146302733
Synonym: Fjoh_5006
Alternate gene names: NA
Gene position: 6044322-6045122 (Clockwise)
Preceding gene: 146302732
Following gene: 146302734
Centisome position: 99.14
GC content: 36.95
Gene sequence:
>801_bases ATGAAAAACATACTATACAAAGCTTTCGCTATTGCAGCAATCTCTCTATCATTAATTTCTTGTTCAAGCGATGACAACGA AGAAGCAGCAGGAAACGGAAATATTACATTAAAATTTGACAACGCTTACGGAACAAACGACCTTATTTTAAACACTCAGG GAAACACAACTTCTAACAATGAAGTATTAAAAATAAGCCTTGTAAAATATATTGTAAGCAATGTAGTTTTTACAAAAGCT GACGGAAGCACTTTTACTTACCCAAAAAGCAAAAGCTATTTTATTGCTGACGAATCTACTGCAGCCGGACAGCAGTTTAA ACTAACAGATATTCCTGCCGGAGATTACGTAAAAGTAAAATTTGGAATTGGAGTTGATGAAGAACAATGGAAATTAGGAG CTGCTGGTCAGGGAGATTTTCTTGCACAGGCAGATGCTGCAGGTATGATGTGGTCTTGGGCTGCAGGTTACAAATTCTTT GCTCTTGAAGGAACTTTTACTTCGCCTACTGTTACAACTGCAACTCCATTTATGATTCATACCGGAAAAACTGGAACTGA CTACAACTATACTGAAGTAACTATAGATTTCCCTACTAAAGCTTTGGTTCGTACTAACATTACTCCTGCTGTTCACATCA TTACAGATCTTTCTAAAGTTATCGACGGTACAAACAAAATCAAACTTTCTGACAACAACTCAGGCGGAATGGGCGCTATG ATTATGGGTGGTGCAAACTTACCTTTAATTACTCAAAACTTCAATACTATGTTTAGAGTAGACCACGTACATAACGACTA A
Upstream 100 bases:
>100_bases TTATTTCAATTTTATTGAAATCAATTTTCATTGTTTTAAAATCAATGAAAAAGCGTTTACGCATACTTTAAATTTAAATT TTTATATAAAAATCCTTAAA
Downstream 100 bases:
>100_bases ATTTATTTTCAGAAGCACAAAAGTTATAGTTCTTAAGAACTCACTTCCCGCTATCCGCTTTATCTTTTGCGTTTGCTGCT GCAAACACAAAAGGATACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKNILYKAFAIAAISLSLISCSSDDNEEAAGNGNITLKFDNAYGTNDLILNTQGNTTSNNEVLKISLVKYIVSNVVFTKA DGSTFTYPKSKSYFIADESTAAGQQFKLTDIPAGDYVKVKFGIGVDEEQWKLGAAGQGDFLAQADAAGMMWSWAAGYKFF ALEGTFTSPTVTTATPFMIHTGKTGTDYNYTEVTIDFPTKALVRTNITPAVHIITDLSKVIDGTNKIKLSDNNSGGMGAM IMGGANLPLITQNFNTMFRVDHVHND
Sequences:
>Translated_266_residues MKNILYKAFAIAAISLSLISCSSDDNEEAAGNGNITLKFDNAYGTNDLILNTQGNTTSNNEVLKISLVKYIVSNVVFTKA DGSTFTYPKSKSYFIADESTAAGQQFKLTDIPAGDYVKVKFGIGVDEEQWKLGAAGQGDFLAQADAAGMMWSWAAGYKFF ALEGTFTSPTVTTATPFMIHTGKTGTDYNYTEVTIDFPTKALVRTNITPAVHIITDLSKVIDGTNKIKLSDNNSGGMGAM IMGGANLPLITQNFNTMFRVDHVHND >Mature_266_residues MKNILYKAFAIAAISLSLISCSSDDNEEAAGNGNITLKFDNAYGTNDLILNTQGNTTSNNEVLKISLVKYIVSNVVFTKA DGSTFTYPKSKSYFIADESTAAGQQFKLTDIPAGDYVKVKFGIGVDEEQWKLGAAGQGDFLAQADAAGMMWSWAAGYKFF ALEGTFTSPTVTTATPFMIHTGKTGTDYNYTEVTIDFPTKALVRTNITPAVHIITDLSKVIDGTNKIKLSDNNSGGMGAM IMGGANLPLITQNFNTMFRVDHVHND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28683; Mature: 28683
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00878 ODR_DC_2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNILYKAFAIAAISLSLISCSSDDNEEAAGNGNITLKFDNAYGTNDLILNTQGNTTSNN CCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCC EVLKISLVKYIVSNVVFTKADGSTFTYPKSKSYFIADESTAAGQQFKLTDIPAGDYVKVK CEEEEHHHHHHHHCEEEEECCCCEEECCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEE FGIGVDEEQWKLGAAGQGDFLAQADAAGMMWSWAAGYKFFALEGTFTSPTVTTATPFMIH ECCCCCHHHEEECCCCCCCEEEECCCCCEEEEECCCEEEEEEECCCCCCEEECCCCEEEE TGKTGTDYNYTEVTIDFPTKALVRTNITPAVHIITDLSKVIDGTNKIKLSDNNSGGMGAM CCCCCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEE IMGGANLPLITQNFNTMFRVDHVHND EECCCCCCEEECCCCEEEEEEEECCC >Mature Secondary Structure MKNILYKAFAIAAISLSLISCSSDDNEEAAGNGNITLKFDNAYGTNDLILNTQGNTTSNN CCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCC EVLKISLVKYIVSNVVFTKADGSTFTYPKSKSYFIADESTAAGQQFKLTDIPAGDYVKVK CEEEEHHHHHHHHCEEEEECCCCEEECCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEE FGIGVDEEQWKLGAAGQGDFLAQADAAGMMWSWAAGYKFFALEGTFTSPTVTTATPFMIH ECCCCCHHHEEECCCCCCCEEEECCCCCEEEEECCCEEEEEEECCCCCCEEECCCCEEEE TGKTGTDYNYTEVTIDFPTKALVRTNITPAVHIITDLSKVIDGTNKIKLSDNNSGGMGAM CCCCCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEE IMGGANLPLITQNFNTMFRVDHVHND EECCCCCCEEECCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA