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The map label for this gene is cinA [C]

Identifier: 146302711

GI number: 146302711

Start: 6020521

End: 6021774

Strand: Reverse

Name: cinA [C]

Synonym: Fjoh_4984

Alternate gene names: 146302711

Gene position: 6021774-6020521 (Counterclockwise)

Preceding gene: 146302712

Following gene: 146302710

Centisome position: 98.77

GC content: 37.16

Gene sequence:

>1254_bases
ATGAAAGCAACAATAGTTACCATTGGAGATGAAATTTTAATTGGTCAAATTGTAGATACAAATTCAAATTTTATAGCCAA
AGAGCTGGATAGAATTGGTGTCGAAACGTATGAAATGATTTCGATAAGCGATGATAAACAGCATATTTTAAACACTTTTG
CACAATTACAGAATAAAGTAGATGTTGTAATTGTAACAGGCGGTCTTGGGCCGACAAAAGATGATGTTACCAAAAAAACT
TTCTGCGAATATTTTGATGATGAACTGGTGGTAAATCCAGAAGTTTTGGCTCACGTAACAGAACTTATCGAAGGATTTTA
TAAAAGACCAATTTCGCAGTTAAATAAAGATCAGGCGCTTGTTCCGTCAAAATGCACCGTTCTTCATAATAAAATGGGAA
CAGCTCCGGGAATGTGGATGAAAAAGGAAAACACAGTGTTTGTTTCACTTCCGGGAGTTCCGTATGAAATGAAATATCTG
GTAGAAAACGAAATAATCCCAAAAATTGTAAAAGAATATAAACGCCCATATATAATTCATAAAACCATTTTAACGTACGG
TCAGGGCGAAAGTTTAGTCGCAGAACGTATTGAAAACTGGGAAAACAACCTGCCTGAATTTATAAAACTGGCTTATCTGC
CAAATCCGGGAAGAGTCCGCCTTCGTATGACTGCCCGCGGAACAGATAAAGAGGTGCTTGAAAAAGCAATAGAAGAAAAT
GTTCAGTCGCTTGATGCTATAATTCATGATATTATAGTAGGTTACGAAGAAAATGAAACCATCGAAACTGTAGTAGGGAA
ACTGCTTGCCAAACAAAATAAAACCGTTTCGACAGCAGAAAGCTGTACAGGAGGAAAAGTTGCGTCGCTTTTGGCATCTG
TTCAGGGCGCTTCTGCATATTTTAAAGGAAGTGTTGTTTCGTATGCAACAGAAGCAAAGGTTAATGTTTTGGGAGTTTCG
CAGGATTTAATAGACCAGTTTTCGGTAGTAAGTGCTGAGGTTGCGGCTGCTATGGCTTTGAATGTGAAAAACATACTAAA
AACAGACTATGCAATTGCGACAACCGGAAATGCTGGTCCGTCAAAAGGTGACTCAGAAGCTGAAATTGGAACTGTTTTTA
TTGCTTTGGCAACACCAAACGGAGTAATTACAGAAGAATTTAACTTTGGACAACCGCGTGAAAAAGTGATAGATAGGGCG
ACTATTAAGAGTTTAGAAATATTACAGAAAGAAATTTTAAAAATTGTGCAATAA

Upstream 100 bases:

>100_bases
CACATATAAACAAAGGTTTCTTTGTTTCCTGCCTCAAATCATTTCCGCAATCCTACTTCATAAATAAACTTATAACTTTA
TAAGTAAAACTTTTAATACT

Downstream 100 bases:

>100_bases
TTTTTTGCTACAATGGTTTATTTTTCTTTTCTTTGCACCCTGATTTTGAATAACGATAAAAGATAAGTATAATGTCAAGA
GTTTGTGACCTTACAGGTAA

Product: competence/damage-inducible protein CinA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MKATIVTIGDEILIGQIVDTNSNFIAKELDRIGVETYEMISISDDKQHILNTFAQLQNKVDVVIVTGGLGPTKDDVTKKT
FCEYFDDELVVNPEVLAHVTELIEGFYKRPISQLNKDQALVPSKCTVLHNKMGTAPGMWMKKENTVFVSLPGVPYEMKYL
VENEIIPKIVKEYKRPYIIHKTILTYGQGESLVAERIENWENNLPEFIKLAYLPNPGRVRLRMTARGTDKEVLEKAIEEN
VQSLDAIIHDIIVGYEENETIETVVGKLLAKQNKTVSTAESCTGGKVASLLASVQGASAYFKGSVVSYATEAKVNVLGVS
QDLIDQFSVVSAEVAAAMALNVKNILKTDYAIATTGNAGPSKGDSEAEIGTVFIALATPNGVITEEFNFGQPREKVIDRA
TIKSLEILQKEILKIVQ

Sequences:

>Translated_417_residues
MKATIVTIGDEILIGQIVDTNSNFIAKELDRIGVETYEMISISDDKQHILNTFAQLQNKVDVVIVTGGLGPTKDDVTKKT
FCEYFDDELVVNPEVLAHVTELIEGFYKRPISQLNKDQALVPSKCTVLHNKMGTAPGMWMKKENTVFVSLPGVPYEMKYL
VENEIIPKIVKEYKRPYIIHKTILTYGQGESLVAERIENWENNLPEFIKLAYLPNPGRVRLRMTARGTDKEVLEKAIEEN
VQSLDAIIHDIIVGYEENETIETVVGKLLAKQNKTVSTAESCTGGKVASLLASVQGASAYFKGSVVSYATEAKVNVLGVS
QDLIDQFSVVSAEVAAAMALNVKNILKTDYAIATTGNAGPSKGDSEAEIGTVFIALATPNGVITEEFNFGQPREKVIDRA
TIKSLEILQKEILKIVQ
>Mature_417_residues
MKATIVTIGDEILIGQIVDTNSNFIAKELDRIGVETYEMISISDDKQHILNTFAQLQNKVDVVIVTGGLGPTKDDVTKKT
FCEYFDDELVVNPEVLAHVTELIEGFYKRPISQLNKDQALVPSKCTVLHNKMGTAPGMWMKKENTVFVSLPGVPYEMKYL
VENEIIPKIVKEYKRPYIIHKTILTYGQGESLVAERIENWENNLPEFIKLAYLPNPGRVRLRMTARGTDKEVLEKAIEEN
VQSLDAIIHDIIVGYEENETIETVVGKLLAKQNKTVSTAESCTGGKVASLLASVQGASAYFKGSVVSYATEAKVNVLGVS
QDLIDQFSVVSAEVAAAMALNVKNILKTDYAIATTGNAGPSKGDSEAEIGTVFIALATPNGVITEEFNFGQPREKVIDRA
TIKSLEILQKEILKIVQ

Specific function: Unknown

COG id: COG1058

COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family

Homologues:

Organism=Homo sapiens, GI41872389, Length=100, Percent_Identity=35, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI41872403, Length=100, Percent_Identity=35, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI296434309, Length=95, Percent_Identity=35.7894736842105, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1788583, Length=291, Percent_Identity=26.1168384879725, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1789052, Length=151, Percent_Identity=38.4105960264901, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1787818, Length=155, Percent_Identity=34.1935483870968, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71993966, Length=104, Percent_Identity=35.5769230769231, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71993974, Length=104, Percent_Identity=35.5769230769231, Blast_Score=69, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6323832, Length=84, Percent_Identity=41.6666666666667, Blast_Score=74, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CINAL_FLAJ1 (A5F9Y3)

Other databases:

- EMBL:   CP000685
- RefSeq:   YP_001197302.1
- ProteinModelPortal:   A5F9Y3
- STRING:   A5F9Y3
- GeneID:   5094254
- GenomeReviews:   CP000685_GR
- KEGG:   fjo:Fjoh_4984
- eggNOG:   COG1058
- HOGENOM:   HBG449871
- OMA:   NPTVAPY
- ProtClustDB:   CLSK822449
- BioCyc:   FJOH376686:FJOH_4984-MONOMER
- HAMAP:   MF_00226_B
- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453
- Gene3D:   G3DSA:3.40.980.10
- PIRSF:   PIRSF006728
- SMART:   SM00852
- TIGRFAMs:   TIGR00199
- TIGRFAMs:   TIGR00200

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth; SSF53218 MoCF_biosynth

EC number: NA

Molecular weight: Translated: 45899; Mature: 45899

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATIVTIGDEILIGQIVDTNSNFIAKELDRIGVETYEMISISDDKQHILNTFAQLQNKV
CCEEEEEECCCEEEEEEEECCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCC
DVVIVTGGLGPTKDDVTKKTFCEYFDDELVVNPEVLAHVTELIEGFYKRPISQLNKDQAL
EEEEEECCCCCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VPSKCTVLHNKMGTAPGMWMKKENTVFVSLPGVPYEMKYLVENEIIPKIVKEYKRPYIIH
CCCHHHHHHHHCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
KTILTYGQGESLVAERIENWENNLPEFIKLAYLPNPGRVRLRMTARGTDKEVLEKAIEEN
HHHHHCCCCHHHHHHHHHHHHCCCHHHHEEEECCCCCCEEEEEEECCCCHHHHHHHHHHH
VQSLDAIIHDIIVGYEENETIETVVGKLLAKQNKTVSTAESCTGGKVASLLASVQGASAY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCHH
FKGSVVSYATEAKVNVLGVSQDLIDQFSVVSAEVAAAMALNVKNILKTDYAIATTGNAGP
HCCCHHHEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC
SKGDSEAEIGTVFIALATPNGVITEEFNFGQPREKVIDRATIKSLEILQKEILKIVQ
CCCCCCCCEEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKATIVTIGDEILIGQIVDTNSNFIAKELDRIGVETYEMISISDDKQHILNTFAQLQNKV
CCEEEEEECCCEEEEEEEECCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCC
DVVIVTGGLGPTKDDVTKKTFCEYFDDELVVNPEVLAHVTELIEGFYKRPISQLNKDQAL
EEEEEECCCCCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VPSKCTVLHNKMGTAPGMWMKKENTVFVSLPGVPYEMKYLVENEIIPKIVKEYKRPYIIH
CCCHHHHHHHHCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
KTILTYGQGESLVAERIENWENNLPEFIKLAYLPNPGRVRLRMTARGTDKEVLEKAIEEN
HHHHHCCCCHHHHHHHHHHHHCCCHHHHEEEECCCCCCEEEEEEECCCCHHHHHHHHHHH
VQSLDAIIHDIIVGYEENETIETVVGKLLAKQNKTVSTAESCTGGKVASLLASVQGASAY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCHH
FKGSVVSYATEAKVNVLGVSQDLIDQFSVVSAEVAAAMALNVKNILKTDYAIATTGNAGP
HCCCHHHEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC
SKGDSEAEIGTVFIALATPNGVITEEFNFGQPREKVIDRATIKSLEILQKEILKIVQ
CCCCCCCCEEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA