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The map label for this gene is ftsY [H]

Identifier: 146302707

GI number: 146302707

Start: 6018556

End: 6019509

Strand: Reverse

Name: ftsY [H]

Synonym: Fjoh_4980

Alternate gene names: 146302707

Gene position: 6019509-6018556 (Counterclockwise)

Preceding gene: 146302708

Following gene: 146302705

Centisome position: 98.73

GC content: 35.53

Gene sequence:

>954_bases
ATGAGTTTTTTTAAAAAATTATTCTCTACCGAAAAAAAAGAGACTTTAGATAAAGGTCTTGAAAAAACAAAAACTACTTT
TTTCTCTAAGTTAAGCAAAGCTGTTGCAGGAAAATCTAAAGTCGATGATGACGTTTTAGACAATCTTGAAGAAGTTTTGG
TAGGTTCAGATGTTGGAGTAAACACCACGCTGAAAATTATCGAAAGAATCGAAAAACGCGTTGCCGAAGACAAATATTTA
GGAACAGATGAATTAAATCAAATTCTTCGTGATGAAATTGGCGGTTTATTGTCTGAAACCAATACAGGTGAAGCAACAGA
ATTTGAAATTCCAAAAGATAAAAAACCTTATGTTTTAATGGTTGTTGGAGTAAATGGTGTTGGGAAAACGACCACAATTG
GCAAACTGGCTTATCAGTTCAAAAAAGCAGGTTATAAAGTTGTTTTAGGTGCAGCCGATACTTTCCGTGCCGCTGCGATA
GATCAGCTGCAAGTTTGGGCAGATCGTGTAAATGTTCCAATTGTAAGACAAAATATGGGAAGTGATCCCGCTTCTGTAGC
TTTTGATACCCTGCAGTCTGCCGTAGCTCAAAATGCAGATGTTGTAATTATTGATACTGCTGGACGTTTGCATAATAAAA
TCAATTTAATGAATGAGCTTTCTAAAGTAAAACGTGTTATGCAAAAAGTAGTTGCAGATGCGCCTCATGATGTACTTTTG
GTTTTAGATGGTTCAACAGGTCAAAATGCTTTTGAACAGGCAAAACAATTTACTGCCGCGACAGAAGTAACTTCACTTGC
AGTTACAAAATTAGACGGAACAGCAAAAGGCGGTGTTGTAATTGGTATTTCTGACCAGTTTCAAATTCCGGTAAAATATA
TTGGTGTAGGCGAAGGAATTGAAGACTTACAAGTCTTTAATAAATATGAATTCGTTGACAGTTTCTTTAAATAA

Upstream 100 bases:

>100_bases
ATCGATCCTGTCGGGGTTAGATTAAAAACAATACGCGTTCTATAAACATCAGGATTGTTTCAAAACTCAAGAACAATCTA
AAACTAACAATAAATTAAAA

Downstream 100 bases:

>100_bases
TTTATAATGAGTTTAGAATCTTTTAAAAATATTACACCGCTTACTTTTTATTTTGTGAGTGTTGTGTGTTTTGTTTTAGC
AAATGTTACCAGAGATAAAA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSFFKKLFSTEKKETLDKGLEKTKTTFFSKLSKAVAGKSKVDDDVLDNLEEVLVGSDVGVNTTLKIIERIEKRVAEDKYL
GTDELNQILRDEIGGLLSETNTGEATEFEIPKDKKPYVLMVVGVNGVGKTTTIGKLAYQFKKAGYKVVLGAADTFRAAAI
DQLQVWADRVNVPIVRQNMGSDPASVAFDTLQSAVAQNADVVIIDTAGRLHNKINLMNELSKVKRVMQKVVADAPHDVLL
VLDGSTGQNAFEQAKQFTAATEVTSLAVTKLDGTAKGGVVIGISDQFQIPVKYIGVGEGIEDLQVFNKYEFVDSFFK

Sequences:

>Translated_317_residues
MSFFKKLFSTEKKETLDKGLEKTKTTFFSKLSKAVAGKSKVDDDVLDNLEEVLVGSDVGVNTTLKIIERIEKRVAEDKYL
GTDELNQILRDEIGGLLSETNTGEATEFEIPKDKKPYVLMVVGVNGVGKTTTIGKLAYQFKKAGYKVVLGAADTFRAAAI
DQLQVWADRVNVPIVRQNMGSDPASVAFDTLQSAVAQNADVVIIDTAGRLHNKINLMNELSKVKRVMQKVVADAPHDVLL
VLDGSTGQNAFEQAKQFTAATEVTSLAVTKLDGTAKGGVVIGISDQFQIPVKYIGVGEGIEDLQVFNKYEFVDSFFK
>Mature_316_residues
SFFKKLFSTEKKETLDKGLEKTKTTFFSKLSKAVAGKSKVDDDVLDNLEEVLVGSDVGVNTTLKIIERIEKRVAEDKYLG
TDELNQILRDEIGGLLSETNTGEATEFEIPKDKKPYVLMVVGVNGVGKTTTIGKLAYQFKKAGYKVVLGAADTFRAAAID
QLQVWADRVNVPIVRQNMGSDPASVAFDTLQSAVAQNADVVIIDTAGRLHNKINLMNELSKVKRVMQKVVADAPHDVLLV
LDGSTGQNAFEQAKQFTAATEVTSLAVTKLDGTAKGGVVIGISDQFQIPVKYIGVGEGIEDLQVFNKYEFVDSFFK

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=206, Percent_Identity=36.4077669902913, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI226371618, Length=206, Percent_Identity=36.4077669902913, Blast_Score=136, Evalue=2e-32,
Organism=Homo sapiens, GI295424842, Length=325, Percent_Identity=26.7692307692308, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI23308697, Length=325, Percent_Identity=26.7692307692308, Blast_Score=112, Evalue=3e-25,
Organism=Homo sapiens, GI89061728, Length=131, Percent_Identity=33.587786259542, Blast_Score=80, Evalue=3e-15,
Organism=Escherichia coli, GI1789874, Length=301, Percent_Identity=49.8338870431894, Blast_Score=280, Evalue=1e-76,
Organism=Escherichia coli, GI1788963, Length=292, Percent_Identity=32.8767123287671, Blast_Score=135, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI17539958, Length=275, Percent_Identity=31.6363636363636, Blast_Score=135, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI193206261, Length=318, Percent_Identity=27.6729559748428, Blast_Score=107, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=280, Percent_Identity=31.7857142857143, Blast_Score=145, Evalue=8e-36,
Organism=Saccharomyces cerevisiae, GI6320498, Length=334, Percent_Identity=26.0479041916168, Blast_Score=93, Evalue=5e-20,
Organism=Drosophila melanogaster, GI17647949, Length=297, Percent_Identity=29.96632996633, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24641198, Length=234, Percent_Identity=28.2051282051282, Blast_Score=99, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 34577; Mature: 34446

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFKKLFSTEKKETLDKGLEKTKTTFFSKLSKAVAGKSKVDDDVLDNLEEVLVGSDVGV
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
NTTLKIIERIEKRVAEDKYLGTDELNQILRDEIGGLLSETNTGEATEFEIPKDKKPYVLM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEE
VVGVNGVGKTTTIGKLAYQFKKAGYKVVLGAADTFRAAAIDQLQVWADRVNVPIVRQNMG
EEECCCCCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEECCCC
SDPASVAFDTLQSAVAQNADVVIIDTAGRLHNKINLMNELSKVKRVMQKVVADAPHDVLL
CCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VLDGSTGQNAFEQAKQFTAATEVTSLAVTKLDGTAKGGVVIGISDQFQIPVKYIGVGEGI
EEECCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCEECCEEEEECCCCH
EDLQVFNKYEFVDSFFK
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFFKKLFSTEKKETLDKGLEKTKTTFFSKLSKAVAGKSKVDDDVLDNLEEVLVGSDVGV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
NTTLKIIERIEKRVAEDKYLGTDELNQILRDEIGGLLSETNTGEATEFEIPKDKKPYVLM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEE
VVGVNGVGKTTTIGKLAYQFKKAGYKVVLGAADTFRAAAIDQLQVWADRVNVPIVRQNMG
EEECCCCCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEECCCC
SDPASVAFDTLQSAVAQNADVVIIDTAGRLHNKINLMNELSKVKRVMQKVVADAPHDVLL
CCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VLDGSTGQNAFEQAKQFTAATEVTSLAVTKLDGTAKGGVVIGISDQFQIPVKYIGVGEGI
EEECCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCEECCEEEEECCCCH
EDLQVFNKYEFVDSFFK
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]