Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302701

Identifier: 146302701

GI number: 146302701

Start: 6012597

End: 6014186

Strand: Direct

Name: 146302701

Synonym: Fjoh_4974

Alternate gene names: NA

Gene position: 6012597-6014186 (Clockwise)

Preceding gene: 146302698

Following gene: 146302702

Centisome position: 98.62

GC content: 32.01

Gene sequence:

>1590_bases
ATGCCTACCGACTGTATCAGCTATCAAACCTCTGGATATTTTTCTAAATTGATACAAGATTATTTAGATCAAAAATCAGA
ATTAAAAACGCTGTACAACCATTTTCCAACATTGGAAAATTTCGAAAAACAAATTGCCGAAAAAGCTTCGAATTTTGATA
ACCATAACCGAATTGCATTAGTTAATACCTTAAAAAAGCAATATCAAAACATCGAAATCTCGGATTCGACCAAACAAAAC
ATTGAGCTTTTAGCACTCGAAAATACTTTTACAATAACAACAGGGCATCAGTTAAACTTATTTAGCGGGCCTTTGTATTT
CTTATACAAAATCATTTCGACCATTAATCTTACCAAAGAATTAAAATCGAAATATCCATCTTATAATTTTGTTCCCGTTT
ATTGGATGGCAACAGAAGATCATGATTTTGAAGAAATCAATTATTTTAATTTTAAAGGAAAAAAATTCAGATGGAATAAA
GAAAGTAATGGTCCGGTTGGCCGACTTTCAACTGAAGGTCTAGCTGAGTTTTTAGATATTTATTCCTTAGAATTAGGTTC
GAGTACGAATGCCAATACTTTAAAAAAGCTTTTTGAAGACACTTATTTAAAACACGATAATCTGGCTGATGCAACCCGAT
TTTTAGCCAACAGCTTATTTGCTAATTATGGTTTAGTAATTATAGATGCTGACGATGCTGATTTAAAACGTGCTTTTATT
CCGTATGCCAAGGAAGAATTAGAAAAACAGACTTCATACAAAGCTGTTCAGGAAACAATTGAACAATTAAAAGAATATAC
CGTTCAGGTAAATCCGCGTGAGATTAATTTGTTTTATATTGAAGACAATCTGCGCGAAAGAATCATTTTTGAAGAAGATA
AATATTTTGTAAACAATACAAAAATCTCGTTTTCTAAAGATCAAATTCTTTCTGAATTAGAAAATCATCCTGAAAAATTC
AGTCCAAATGTGATTATGCGTCCGCTTTATCAGGAAATAATCCTGCCTAATTTATGTTACATTGGCGGAGGCGGAGAAAT
TGCTTATTGGCTGGAATTGAAATCATTTTTTGATGCCGTAAACATCACTTTTCCGATGATTTTAGTTCGTAACTCTGTTC
TTTTGGCAACAGAAAAACAAGCTAAAAAAGCAGACCAGTTAAACTTAAGCTGGAAAGACCTTTTTACCAAACAAGAAAAT
TTAGTAAACGCGATTACACATAAAATTTCTGCATTTCCAATTGACTTGACACCTCAAAAAGAAATATTGAAAACCCAATT
TCAATATCTTTACGAATTAGCAGCTCAAACCGACAAATCGTTTTCTGGAGCTGTAAAAGCACAAGAAGTAAAACAAACAA
AAGGTCTGGAAAATCTTGAAAAACGTTTATTAAAAGCGCAAAAAAGAAACCTGAGCGATCAATTGCAGCGCGTTATTGAT
TTACAATGCGAACTGTTCCCAAATAACAGTCTGCAGGAACGTCAAAGTAATTTTTCTGAATTTTATCTGGAAAAAGGCGA
ACAATTAGTACCGCTTTTATTACAGAAACTGAAACCTTTAGAAATGAATTTTAACATTATAACAATTTAA

Upstream 100 bases:

>100_bases
TAAAATAAAAAGTAAAAATCAAATCATAAGCAATCGTTAAAACCGTTTTTAACTGTATATTTTCATTAAATTTACAGCTG
TCAAAAATAAATTTAAAATT

Downstream 100 bases:

>100_bases
AAAAATAAAGTAATAATGCTGAGAACCAAATAACCACCTATCTCTCTAAATTATTATTCTTCAAACCAAATAGCGATTTT
TAAAATTATTAACTAACCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MPTDCISYQTSGYFSKLIQDYLDQKSELKTLYNHFPTLENFEKQIAEKASNFDNHNRIALVNTLKKQYQNIEISDSTKQN
IELLALENTFTITTGHQLNLFSGPLYFLYKIISTINLTKELKSKYPSYNFVPVYWMATEDHDFEEINYFNFKGKKFRWNK
ESNGPVGRLSTEGLAEFLDIYSLELGSSTNANTLKKLFEDTYLKHDNLADATRFLANSLFANYGLVIIDADDADLKRAFI
PYAKEELEKQTSYKAVQETIEQLKEYTVQVNPREINLFYIEDNLRERIIFEEDKYFVNNTKISFSKDQILSELENHPEKF
SPNVIMRPLYQEIILPNLCYIGGGGEIAYWLELKSFFDAVNITFPMILVRNSVLLATEKQAKKADQLNLSWKDLFTKQEN
LVNAITHKISAFPIDLTPQKEILKTQFQYLYELAAQTDKSFSGAVKAQEVKQTKGLENLEKRLLKAQKRNLSDQLQRVID
LQCELFPNNSLQERQSNFSEFYLEKGEQLVPLLLQKLKPLEMNFNIITI

Sequences:

>Translated_529_residues
MPTDCISYQTSGYFSKLIQDYLDQKSELKTLYNHFPTLENFEKQIAEKASNFDNHNRIALVNTLKKQYQNIEISDSTKQN
IELLALENTFTITTGHQLNLFSGPLYFLYKIISTINLTKELKSKYPSYNFVPVYWMATEDHDFEEINYFNFKGKKFRWNK
ESNGPVGRLSTEGLAEFLDIYSLELGSSTNANTLKKLFEDTYLKHDNLADATRFLANSLFANYGLVIIDADDADLKRAFI
PYAKEELEKQTSYKAVQETIEQLKEYTVQVNPREINLFYIEDNLRERIIFEEDKYFVNNTKISFSKDQILSELENHPEKF
SPNVIMRPLYQEIILPNLCYIGGGGEIAYWLELKSFFDAVNITFPMILVRNSVLLATEKQAKKADQLNLSWKDLFTKQEN
LVNAITHKISAFPIDLTPQKEILKTQFQYLYELAAQTDKSFSGAVKAQEVKQTKGLENLEKRLLKAQKRNLSDQLQRVID
LQCELFPNNSLQERQSNFSEFYLEKGEQLVPLLLQKLKPLEMNFNIITI
>Mature_528_residues
PTDCISYQTSGYFSKLIQDYLDQKSELKTLYNHFPTLENFEKQIAEKASNFDNHNRIALVNTLKKQYQNIEISDSTKQNI
ELLALENTFTITTGHQLNLFSGPLYFLYKIISTINLTKELKSKYPSYNFVPVYWMATEDHDFEEINYFNFKGKKFRWNKE
SNGPVGRLSTEGLAEFLDIYSLELGSSTNANTLKKLFEDTYLKHDNLADATRFLANSLFANYGLVIIDADDADLKRAFIP
YAKEELEKQTSYKAVQETIEQLKEYTVQVNPREINLFYIEDNLRERIIFEEDKYFVNNTKISFSKDQILSELENHPEKFS
PNVIMRPLYQEIILPNLCYIGGGGEIAYWLELKSFFDAVNITFPMILVRNSVLLATEKQAKKADQLNLSWKDLFTKQENL
VNAITHKISAFPIDLTPQKEILKTQFQYLYELAAQTDKSFSGAVKAQEVKQTKGLENLEKRLLKAQKRNLSDQLQRVIDL
QCELFPNNSLQERQSNFSEFYLEKGEQLVPLLLQKLKPLEMNFNIITI

Specific function: Unknown

COG id: COG4365

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0747 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4974_FLAJ1 (A5F9Z4)

Other databases:

- EMBL:   CP000685
- RefSeq:   YP_001197292.1
- STRING:   A5F9Z4
- GeneID:   5094244
- GenomeReviews:   CP000685_GR
- KEGG:   fjo:Fjoh_4974
- eggNOG:   COG4365
- HOGENOM:   HBG479593
- OMA:   TRPLMQE
- ProtClustDB:   CLSK847417
- BioCyc:   FJOH376686:FJOH_4974-MONOMER
- HAMAP:   MF_01867
- InterPro:   IPR011199
- PIRSF:   PIRSF012535

Pfam domain/function: PF10079 DUF2317

EC number: NA

Molecular weight: Translated: 61541; Mature: 61410

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTDCISYQTSGYFSKLIQDYLDQKSELKTLYNHFPTLENFEKQIAEKASNFDNHNRIAL
CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEH
VNTLKKQYQNIEISDSTKQNIELLALENTFTITTGHQLNLFSGPLYFLYKIISTINLTKE
HHHHHHHHCCCCCCCCCCCCEEEEEEECEEEEECCCEEEECCCHHHHHHHHHHHHHHHHH
LKSKYPSYNFVPVYWMATEDHDFEEINYFNFKGKKFRWNKESNGPVGRLSTEGLAEFLDI
HHHHCCCCCCEEEEEEECCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHH
YSLELGSSTNANTLKKLFEDTYLKHDNLADATRFLANSLFANYGLVIIDADDADLKRAFI
HHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHC
PYAKEELEKQTSYKAVQETIEQLKEYTVQVNPREINLFYIEDNLRERIIFEEDKYFVNNT
CHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEEEECCCCCCEEEECCCEEEECC
KISFSKDQILSELENHPEKFSPNVIMRPLYQEIILPNLCYIGGGGEIAYWLELKSFFDAV
EEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEEHHHHHHHH
NITFPMILVRNSVLLATEKQAKKADQLNLSWKDLFTKQENLVNAITHKISAFPIDLTPQK
HHHHHHHHHHCCEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
EILKTQFQYLYELAAQTDKSFSGAVKAQEVKQTKGLENLEKRLLKAQKRNLSDQLQRVID
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHH
LQCELFPNNSLQERQSNFSEFYLEKGEQLVPLLLQKLKPLEMNFNIITI
CCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEC
>Mature Secondary Structure 
PTDCISYQTSGYFSKLIQDYLDQKSELKTLYNHFPTLENFEKQIAEKASNFDNHNRIAL
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEH
VNTLKKQYQNIEISDSTKQNIELLALENTFTITTGHQLNLFSGPLYFLYKIISTINLTKE
HHHHHHHHCCCCCCCCCCCCEEEEEEECEEEEECCCEEEECCCHHHHHHHHHHHHHHHHH
LKSKYPSYNFVPVYWMATEDHDFEEINYFNFKGKKFRWNKESNGPVGRLSTEGLAEFLDI
HHHHCCCCCCEEEEEEECCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHH
YSLELGSSTNANTLKKLFEDTYLKHDNLADATRFLANSLFANYGLVIIDADDADLKRAFI
HHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHC
PYAKEELEKQTSYKAVQETIEQLKEYTVQVNPREINLFYIEDNLRERIIFEEDKYFVNNT
CHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEEEECCCCCCEEEECCCEEEECC
KISFSKDQILSELENHPEKFSPNVIMRPLYQEIILPNLCYIGGGGEIAYWLELKSFFDAV
EEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEEHHHHHHHH
NITFPMILVRNSVLLATEKQAKKADQLNLSWKDLFTKQENLVNAITHKISAFPIDLTPQK
HHHHHHHHHHCCEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
EILKTQFQYLYELAAQTDKSFSGAVKAQEVKQTKGLENLEKRLLKAQKRNLSDQLQRVID
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHH
LQCELFPNNSLQERQSNFSEFYLEKGEQLVPLLLQKLKPLEMNFNIITI
CCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA