| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302686
Identifier: 146302686
GI number: 146302686
Start: 5993514
End: 5995493
Strand: Direct
Name: 146302686
Synonym: Fjoh_4959
Alternate gene names: NA
Gene position: 5993514-5995493 (Clockwise)
Preceding gene: 146302685
Following gene: 146302688
Centisome position: 98.3
GC content: 34.29
Gene sequence:
>1980_bases ATGAAAAATGCAATTATTCTTTTTTGTTTATTATTTCTAAATCTTTCTTTTTCGCAGCAAAAAAAGAACTTTTCTGTTAG TTCTCCTAATGGAAAAATCGAAGTTACAGTTGCTGTGAGTGATAAAATTTCATGGACGATTTGGCATCAAAAAGATTTGA TTTTGGCACCTTCTGAAATGTCGATGACTTTAGATGAAAATACCGTTTTAGGAAAAAATCCGGTTGTACTAAATACAAAA AAAGAAAGTGTAAATACTGAATTTGAAACACCTTTATACAAAAAGAAAACAGTTCAAAATAAATACAATCAGCTGGTTTT AAATTTTAAAAATGATTTTAGTATTGAATTTCGCGTTTTTGATGATGGCGCTGCTTATCGCTTTATTACCAAAAAGAAAA AGAATATTACTGTAAAATGGGAAAACGTTTCTTTAAATTTCGATCAGGATTACAATACTTTAATGCCGTATGTGCGTGAT TTAAGAAACCCTAAAGATCAATTTATTTCTTCATTTGAATCGCATTACGAAAACAAAAAAATAAGCGGATTTTCTAAAGA TACTCTGGCTTTTTCTCCTTTTTTAATTGATTATAAAAACCACAAAAAAGCCGTTTTTCTGGAAGCTGATTTAGAAGATT ATCCAGGGCTTTTTGTAACCAATAATAAAAACAAAACAGGTTTTGAATCTCGTTTTTCTAAATATCCAACTCAAGAAACC AACGGCGGATTCAACTACCTCAACAAGTTAATTACCGAAAGAGCTGATTATTTAGTTAAAACCAAAGGAACGAGGACTTT TCCGTGGAGAGCGATTGTTATTTCTGAAAATGATACTGCTTTAGCCAATAATGATATGGTTCAGAAATTAGCCGAACCAT CAAAAATAAAAGATATTTCGTGGATAAAACCCGGAAAGGTGGCTTGGGACTGGTGGAACGACTGGAATATTTACAACGTA GATTTTAAAGCTGGAATCAATACGCAGACTTATAAATACTATATTGATTTTGCTTCTAAAAACAAAGTTGAATATGTGGT TTTGGATGAAGGCTGGAGTGTTGAAACCGACATTATGAAACACAACCCAAATGTAGATTTGGAAGCTTTAATTGCTTACG CGAAAGAACGAAATGTTGGTATTATTTTGTGGGCTTCGTGGATGGCTTTGCATGAAAATATTGACGGCGTTTTTGACAAT TATGCTAAATTGGGTGTAAAAGGTTTCAAAGTTGATTTCATTGATCGTGACGATGCCAAAATGGTAAATTCGGTTTATGA AATTGCTCAAAAAGCAGCCAATCACAAACTGATTATTGATTTTCACGGCATGTACAAGCCAACCGGAATTCAGCGAACGT ATCCAAATATTTTAAATTTTGAAGGCGTAAAAGGTCTTGAAAATAATAAATGGACTCCAAATGATGATGTTCCATTATAC GACACCACAATCCCGTTTATCAGAATGATGGCAGGTCCAATGGATTATACGCCGGGTGCAATGAGAAATGCGACAAAAAG CGAGTTCAAACCTAGTCACTCCAACCCAATGAGCCAGGGAACAAGATGTCACCAGCTGGCACTTTACACGATTTTTGAAG CTCCTTTGCAAATGATGGCCGACAGCCCGACTGCTTTTATGAAAGAGCAGGAAAGCACTGATTTTATTGCTAAAGTTCCA ACGACTTTTGATGAAACTGCTGCTCTTGATGGAGAAGTTGGAAAATACATTTCAATTGCCAGAAGAAAAGGAAATACATG GTATTTAGGCGCAATAACAAATTGGGATTCCAGAGACATTACTATTGATTTTTCTTTTCTTGAAAAAGGGAAAAAATTCC AAGCAGAAATTTTCTCAGATGGTCTTAACGCAGACAAAGCAGCAACTGATTATAAAAAAGAAATCGTTACCGTTGATTCT ACGACTAAACTAAAATATCGTTTAGCAAACGGCGGTGGATTAGCGATGATTATCAAATAA
Upstream 100 bases:
>100_bases TAAATAACCGGATTGAAATCCGGTCCTAAAATATTAATCGAGCCTTAGGCTCTTTTCTAAACTGAACTTATATAACTTAT ATGGTTTAAAAAACATCCAG
Downstream 100 bases:
>100_bases AATCCATTTCTATAAACAAACCCGACAGGTTTTAAAAACCTGTCGGGTTATAATATCTAAACATGACGTCGACGCACAGA GGCGCGTATCTACGATTATG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase; Glycoside Hydrolase Family; Alpha-Glucosidase Family Protein; Alpha-Glucosidase Protein; Glycoside Hydrolase Family Protein; Esterase; Alpha-Glucosidase-Like Protein; Glycosyl Hydrolase Family; Alpha-Glucosidase SusB; Secreted Protein
Number of amino acids: Translated: 659; Mature: 659
Protein sequence:
>659_residues MKNAIILFCLLFLNLSFSQQKKNFSVSSPNGKIEVTVAVSDKISWTIWHQKDLILAPSEMSMTLDENTVLGKNPVVLNTK KESVNTEFETPLYKKKTVQNKYNQLVLNFKNDFSIEFRVFDDGAAYRFITKKKKNITVKWENVSLNFDQDYNTLMPYVRD LRNPKDQFISSFESHYENKKISGFSKDTLAFSPFLIDYKNHKKAVFLEADLEDYPGLFVTNNKNKTGFESRFSKYPTQET NGGFNYLNKLITERADYLVKTKGTRTFPWRAIVISENDTALANNDMVQKLAEPSKIKDISWIKPGKVAWDWWNDWNIYNV DFKAGINTQTYKYYIDFASKNKVEYVVLDEGWSVETDIMKHNPNVDLEALIAYAKERNVGIILWASWMALHENIDGVFDN YAKLGVKGFKVDFIDRDDAKMVNSVYEIAQKAANHKLIIDFHGMYKPTGIQRTYPNILNFEGVKGLENNKWTPNDDVPLY DTTIPFIRMMAGPMDYTPGAMRNATKSEFKPSHSNPMSQGTRCHQLALYTIFEAPLQMMADSPTAFMKEQESTDFIAKVP TTFDETAALDGEVGKYISIARRKGNTWYLGAITNWDSRDITIDFSFLEKGKKFQAEIFSDGLNADKAATDYKKEIVTVDS TTKLKYRLANGGGLAMIIK
Sequences:
>Translated_659_residues MKNAIILFCLLFLNLSFSQQKKNFSVSSPNGKIEVTVAVSDKISWTIWHQKDLILAPSEMSMTLDENTVLGKNPVVLNTK KESVNTEFETPLYKKKTVQNKYNQLVLNFKNDFSIEFRVFDDGAAYRFITKKKKNITVKWENVSLNFDQDYNTLMPYVRD LRNPKDQFISSFESHYENKKISGFSKDTLAFSPFLIDYKNHKKAVFLEADLEDYPGLFVTNNKNKTGFESRFSKYPTQET NGGFNYLNKLITERADYLVKTKGTRTFPWRAIVISENDTALANNDMVQKLAEPSKIKDISWIKPGKVAWDWWNDWNIYNV DFKAGINTQTYKYYIDFASKNKVEYVVLDEGWSVETDIMKHNPNVDLEALIAYAKERNVGIILWASWMALHENIDGVFDN YAKLGVKGFKVDFIDRDDAKMVNSVYEIAQKAANHKLIIDFHGMYKPTGIQRTYPNILNFEGVKGLENNKWTPNDDVPLY DTTIPFIRMMAGPMDYTPGAMRNATKSEFKPSHSNPMSQGTRCHQLALYTIFEAPLQMMADSPTAFMKEQESTDFIAKVP TTFDETAALDGEVGKYISIARRKGNTWYLGAITNWDSRDITIDFSFLEKGKKFQAEIFSDGLNADKAATDYKKEIVTVDS TTKLKYRLANGGGLAMIIK >Mature_659_residues MKNAIILFCLLFLNLSFSQQKKNFSVSSPNGKIEVTVAVSDKISWTIWHQKDLILAPSEMSMTLDENTVLGKNPVVLNTK KESVNTEFETPLYKKKTVQNKYNQLVLNFKNDFSIEFRVFDDGAAYRFITKKKKNITVKWENVSLNFDQDYNTLMPYVRD LRNPKDQFISSFESHYENKKISGFSKDTLAFSPFLIDYKNHKKAVFLEADLEDYPGLFVTNNKNKTGFESRFSKYPTQET NGGFNYLNKLITERADYLVKTKGTRTFPWRAIVISENDTALANNDMVQKLAEPSKIKDISWIKPGKVAWDWWNDWNIYNV DFKAGINTQTYKYYIDFASKNKVEYVVLDEGWSVETDIMKHNPNVDLEALIAYAKERNVGIILWASWMALHENIDGVFDN YAKLGVKGFKVDFIDRDDAKMVNSVYEIAQKAANHKLIIDFHGMYKPTGIQRTYPNILNFEGVKGLENNKWTPNDDVPLY DTTIPFIRMMAGPMDYTPGAMRNATKSEFKPSHSNPMSQGTRCHQLALYTIFEAPLQMMADSPTAFMKEQESTDFIAKVP TTFDETAALDGEVGKYISIARRKGNTWYLGAITNWDSRDITIDFSFLEKGKKFQAEIFSDGLNADKAATDYKKEIVTVDS TTKLKYRLANGGGLAMIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75552; Mature: 75552
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNAIILFCLLFLNLSFSQQKKNFSVSSPNGKIEVTVAVSDKISWTIWHQKDLILAPSEM CCCHHHHHHHHHHCCCCCHHCCCCEEECCCCEEEEEEEEECCEEEEEEECCCEEECCCCC SMTLDENTVLGKNPVVLNTKKESVNTEFETPLYKKKTVQNKYNQLVLNFKNDFSIEFRVF EEEECCCEEECCCCEEEECCHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCEEEEEEE DDGAAYRFITKKKKNITVKWENVSLNFDQDYNTLMPYVRDLRNPKDQFISSFESHYENKK ECCCEEEEEEECCCEEEEEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC ISGFSKDTLAFSPFLIDYKNHKKAVFLEADLEDYPGLFVTNNKNKTGFESRFSKYPTQET CCCCCCCCEEECCEEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHCCCCCC NGGFNYLNKLITERADYLVKTKGTRTFPWRAIVISENDTALANNDMVQKLAEPSKIKDIS CCCHHHHHHHHHHHHCEEEEECCCEECCEEEEEEECCCCEECCCHHHHHHCCCCCCCCCC WIKPGKVAWDWWNDWNIYNVDFKAGINTQTYKYYIDFASKNKVEYVVLDEGWSVETDIMK CCCCCCEEEEEECCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEHHHH HNPNVDLEALIAYAKERNVGIILWASWMALHENIDGVFDNYAKLGVKGFKVDFIDRDDAK CCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCHHH MVNSVYEIAQKAANHKLIIDFHGMYKPTGIQRTYPNILNFEGVKGLENNKWTPNDDVPLY HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE DTTIPFIRMMAGPMDYTPGAMRNATKSEFKPSHSNPMSQGTRCHQLALYTIFEAPLQMMA ECHHHHHHHHCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC DSPTAFMKEQESTDFIAKVPTTFDETAALDGEVGKYISIARRKGNTWYLGAITNWDSRDI CCCHHHHHCCCCCCEEEECCCCCCCHHCCCCCHHHHEEEEEECCCEEEEEEEECCCCCEE TIDFSFLEKGKKFQAEIFSDGLNADKAATDYKKEIVTVDSTTKLKYRLANGGGLAMIIK EEEEHHHHCCCCEEHHHHHCCCCCCHHHCCCCCEEEEECCCCEEEEEEECCCCEEEEEC >Mature Secondary Structure MKNAIILFCLLFLNLSFSQQKKNFSVSSPNGKIEVTVAVSDKISWTIWHQKDLILAPSEM CCCHHHHHHHHHHCCCCCHHCCCCEEECCCCEEEEEEEEECCEEEEEEECCCEEECCCCC SMTLDENTVLGKNPVVLNTKKESVNTEFETPLYKKKTVQNKYNQLVLNFKNDFSIEFRVF EEEECCCEEECCCCEEEECCHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCEEEEEEE DDGAAYRFITKKKKNITVKWENVSLNFDQDYNTLMPYVRDLRNPKDQFISSFESHYENKK ECCCEEEEEEECCCEEEEEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC ISGFSKDTLAFSPFLIDYKNHKKAVFLEADLEDYPGLFVTNNKNKTGFESRFSKYPTQET CCCCCCCCEEECCEEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHCCCCCC NGGFNYLNKLITERADYLVKTKGTRTFPWRAIVISENDTALANNDMVQKLAEPSKIKDIS CCCHHHHHHHHHHHHCEEEEECCCEECCEEEEEEECCCCEECCCHHHHHHCCCCCCCCCC WIKPGKVAWDWWNDWNIYNVDFKAGINTQTYKYYIDFASKNKVEYVVLDEGWSVETDIMK CCCCCCEEEEEECCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEHHHH HNPNVDLEALIAYAKERNVGIILWASWMALHENIDGVFDNYAKLGVKGFKVDFIDRDDAK CCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCHHH MVNSVYEIAQKAANHKLIIDFHGMYKPTGIQRTYPNILNFEGVKGLENNKWTPNDDVPLY HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE DTTIPFIRMMAGPMDYTPGAMRNATKSEFKPSHSNPMSQGTRCHQLALYTIFEAPLQMMA ECHHHHHHHHCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC DSPTAFMKEQESTDFIAKVPTTFDETAALDGEVGKYISIARRKGNTWYLGAITNWDSRDI CCCHHHHHCCCCCCEEEECCCCCCCHHCCCCCHHHHEEEEEECCCEEEEEEEECCCCCEE TIDFSFLEKGKKFQAEIFSDGLNADKAATDYKKEIVTVDSTTKLKYRLANGGGLAMIIK EEEEHHHHCCCCEEHHHHHCCCCCCHHHCCCCCEEEEECCCCEEEEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA