Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302668

Identifier: 146302668

GI number: 146302668

Start: 5968125

End: 5969630

Strand: Direct

Name: 146302668

Synonym: Fjoh_4941

Alternate gene names: NA

Gene position: 5968125-5969630 (Clockwise)

Preceding gene: 146302667

Following gene: 146302669

Centisome position: 97.89

GC content: 35.26

Gene sequence:

>1506_bases
ATGAAAAAAATATTATTCCTATTTATTACAGGACTGACTGTCAGCGTCTCATATTCTCAGGAAGTTTCTGACGCTGTACG
ATATGCACAAGACAATTTGACCGGAACTGCAAGATTCAGAGCAATGAGCGGTGCTTTTGGAGCTGTTGGAGGAGATTTAT
CTGCCATTACTGTAAATCCTGCCGGATCTGCCGTATTTAACAATAATCAGGTTGGAGTTTCTTTTAGCAATCAAAATATT
AAAAACAACTCTAACTATTTCGGAACTCAAACTTCTGATAAAGAGAATTCTTTTATTTTAAATCAAGCCGGAGCTGTTTT
TGTTTTTAAAGACCATAATCCAAATAACGGATGGAACAAAATTGCGATTGGCGCCAGTTACGAAAACACTAATAATTTTG
ACAATAATGTTTTTTCTGCCGGCACAAATCCAACAAATTCTATTGGATCATATTTTGTAAATTTTGCTAATGGAATTGAA
TTAGGAAACATAACCGGAATTCCTTACAGAGATCAGTTTTACAACGAACAACAGGCTTACTTTGGATATTATGGACACGT
AATTAATCCTGTTAACGAAAACAGTAATACAAACACACAATACACATCAAACGTTCCTGCAGGTGGAAACTACTATCAAG
AAAATGGAATTCACACAAGCGGATACAATAGTAAATTAAGTTTCAATATTGCAAGTTCTTACAAAGACAGACTTTATTTC
GGAGCAAACTTAAATGTTCACGTTACAGATTATAGGAGATCAAGCAGTTTTTACGAAGATAACTCTAATCCGTTACAGCC
TACTGCAACTATTTCTAATTTACGTTTCAATAATGAACTTTACACATACGGAAACGGCTTTTCTTTTCAGCTAGGAGCTA
TTGCAAAAGTAACAGAAGCATTCAGACTTGGTTTAGCCTATGAATCGAATACCTGGTACAGTCTTTATGACGAAGTATCT
CAAAGCCTTGGCACAACAAGACAAGCAACTGGAGGACCGGAAATTTTTGAAAACATAAACCCAAACGTTGTAAATGTATA
CGAATCTTATACATTACAAACACCAGGTAAGTTTACTTTCAGCGGTGCTTATGTTTTTGGAAAATCAGGCTTAATTAGTT
TAGATTACTCAATTAAAGACTACAGCAACACTAAATTTAAACCAACAAACGATGCGGGCTTTAGAGGAGTTAACAACGAC
ATCAGCAATCAGCTTACTACTGCCGGGGAATTAAGAGTTGGTGCTGAATACAAAATAAAACAATTGAGTTTACGAGGCGG
ATATCGTTTTGAAGGAAGCCCTTATAAAAACGGAACTACAATTGGAGACTTAAACAGCTATTCTGGAGGTTTAGGGTATA
GCTTTGGTTCTACAAAATTAGATCTGGCTTACTCTTATTTAGAAAGAAAATCTAACCAAGGTTTCTTTACAACAGGACTT
ACTGACGGCGCAAACATTACATCAAAGTTAAACAATGTGACTTTGACCTTATTATTTGAATTGTAA

Upstream 100 bases:

>100_bases
GGTGGCGGCGGAGGAAGATCTTACGGTGGCGGAGGAGGCGGAAGAAGGTAACATTTTCGTCCTTTTTCCAATCTAATATC
ACACACTAAATACTTACCCA

Downstream 100 bases:

>100_bases
TTAAGAATAAATAGATGAATGGAAATTTCCGTCAGGTTTACTTGGCGGATTTTTTTTGACTGAAAATTACTAGAAACCTT
TATAAAAAACATCGAAATGA

Product: aromatic hydrocarbon degradation membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MKKILFLFITGLTVSVSYSQEVSDAVRYAQDNLTGTARFRAMSGAFGAVGGDLSAITVNPAGSAVFNNNQVGVSFSNQNI
KNNSNYFGTQTSDKENSFILNQAGAVFVFKDHNPNNGWNKIAIGASYENTNNFDNNVFSAGTNPTNSIGSYFVNFANGIE
LGNITGIPYRDQFYNEQQAYFGYYGHVINPVNENSNTNTQYTSNVPAGGNYYQENGIHTSGYNSKLSFNIASSYKDRLYF
GANLNVHVTDYRRSSSFYEDNSNPLQPTATISNLRFNNELYTYGNGFSFQLGAIAKVTEAFRLGLAYESNTWYSLYDEVS
QSLGTTRQATGGPEIFENINPNVVNVYESYTLQTPGKFTFSGAYVFGKSGLISLDYSIKDYSNTKFKPTNDAGFRGVNND
ISNQLTTAGELRVGAEYKIKQLSLRGGYRFEGSPYKNGTTIGDLNSYSGGLGYSFGSTKLDLAYSYLERKSNQGFFTTGL
TDGANITSKLNNVTLTLLFEL

Sequences:

>Translated_501_residues
MKKILFLFITGLTVSVSYSQEVSDAVRYAQDNLTGTARFRAMSGAFGAVGGDLSAITVNPAGSAVFNNNQVGVSFSNQNI
KNNSNYFGTQTSDKENSFILNQAGAVFVFKDHNPNNGWNKIAIGASYENTNNFDNNVFSAGTNPTNSIGSYFVNFANGIE
LGNITGIPYRDQFYNEQQAYFGYYGHVINPVNENSNTNTQYTSNVPAGGNYYQENGIHTSGYNSKLSFNIASSYKDRLYF
GANLNVHVTDYRRSSSFYEDNSNPLQPTATISNLRFNNELYTYGNGFSFQLGAIAKVTEAFRLGLAYESNTWYSLYDEVS
QSLGTTRQATGGPEIFENINPNVVNVYESYTLQTPGKFTFSGAYVFGKSGLISLDYSIKDYSNTKFKPTNDAGFRGVNND
ISNQLTTAGELRVGAEYKIKQLSLRGGYRFEGSPYKNGTTIGDLNSYSGGLGYSFGSTKLDLAYSYLERKSNQGFFTTGL
TDGANITSKLNNVTLTLLFEL
>Mature_501_residues
MKKILFLFITGLTVSVSYSQEVSDAVRYAQDNLTGTARFRAMSGAFGAVGGDLSAITVNPAGSAVFNNNQVGVSFSNQNI
KNNSNYFGTQTSDKENSFILNQAGAVFVFKDHNPNNGWNKIAIGASYENTNNFDNNVFSAGTNPTNSIGSYFVNFANGIE
LGNITGIPYRDQFYNEQQAYFGYYGHVINPVNENSNTNTQYTSNVPAGGNYYQENGIHTSGYNSKLSFNIASSYKDRLYF
GANLNVHVTDYRRSSSFYEDNSNPLQPTATISNLRFNNELYTYGNGFSFQLGAIAKVTEAFRLGLAYESNTWYSLYDEVS
QSLGTTRQATGGPEIFENINPNVVNVYESYTLQTPGKFTFSGAYVFGKSGLISLDYSIKDYSNTKFKPTNDAGFRGVNND
ISNQLTTAGELRVGAEYKIKQLSLRGGYRFEGSPYKNGTTIGDLNSYSGGLGYSFGSTKLDLAYSYLERKSNQGFFTTGL
TDGANITSKLNNVTLTLLFEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55025; Mature: 55025

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILFLFITGLTVSVSYSQEVSDAVRYAQDNLTGTARFRAMSGAFGAVGGDLSAITVNP
CCEEEEEEEECEEEEEECHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEECC
AGSAVFNNNQVGVSFSNQNIKNNSNYFGTQTSDKENSFILNQAGAVFVFKDHNPNNGWNK
CCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCE
IAIGASYENTNNFDNNVFSAGTNPTNSIGSYFVNFANGIELGNITGIPYRDQFYNEQQAY
EEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHCCCCHHE
FGYYGHVINPVNENSNTNTQYTSNVPAGGNYYQENGIHTSGYNSKLSFNIASSYKDRLYF
EEEECCEECCCCCCCCCCCEEECCCCCCCCEECCCCEEECCCCCEEEEEECCCCCCEEEE
GANLNVHVTDYRRSSSFYEDNSNPLQPTATISNLRFNNELYTYGNGFSFQLGAIAKVTEA
CCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCCEEEECCHHHHHHHH
FRLGLAYESNTWYSLYDEVSQSLGTTRQATGGPEIFENINPNVVNVYESYTLQTPGKFTF
HHEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEEEEEEECCCCCEEE
SGAYVFGKSGLISLDYSIKDYSNTKFKPTNDAGFRGVNNDISNQLTTAGELRVGAEYKIK
EEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEECCCEEEE
QLSLRGGYRFEGSPYKNGTTIGDLNSYSGGLGYSFGSTKLDLAYSYLERKSNQGFFTTGL
EEEECCCEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECC
TDGANITSKLNNVTLTLLFEL
CCCCCHHHHCCCEEEEEEEEC
>Mature Secondary Structure
MKKILFLFITGLTVSVSYSQEVSDAVRYAQDNLTGTARFRAMSGAFGAVGGDLSAITVNP
CCEEEEEEEECEEEEEECHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEECC
AGSAVFNNNQVGVSFSNQNIKNNSNYFGTQTSDKENSFILNQAGAVFVFKDHNPNNGWNK
CCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCE
IAIGASYENTNNFDNNVFSAGTNPTNSIGSYFVNFANGIELGNITGIPYRDQFYNEQQAY
EEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHCCCCHHE
FGYYGHVINPVNENSNTNTQYTSNVPAGGNYYQENGIHTSGYNSKLSFNIASSYKDRLYF
EEEECCEECCCCCCCCCCCEEECCCCCCCCEECCCCEEECCCCCEEEEEECCCCCCEEEE
GANLNVHVTDYRRSSSFYEDNSNPLQPTATISNLRFNNELYTYGNGFSFQLGAIAKVTEA
CCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCCEEEECCHHHHHHHH
FRLGLAYESNTWYSLYDEVSQSLGTTRQATGGPEIFENINPNVVNVYESYTLQTPGKFTF
HHEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEEEEEEECCCCCEEE
SGAYVFGKSGLISLDYSIKDYSNTKFKPTNDAGFRGVNNDISNQLTTAGELRVGAEYKIK
EEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEECCCEEEE
QLSLRGGYRFEGSPYKNGTTIGDLNSYSGGLGYSFGSTKLDLAYSYLERKSNQGFFTTGL
EEEECCCEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECC
TDGANITSKLNNVTLTLLFEL
CCCCCHHHHCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA