| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146302661
Identifier: 146302661
GI number: 146302661
Start: 5958093
End: 5960417
Strand: Direct
Name: 146302661
Synonym: Fjoh_4934
Alternate gene names: NA
Gene position: 5958093-5960417 (Clockwise)
Preceding gene: 146302660
Following gene: 146302663
Centisome position: 97.72
GC content: 33.68
Gene sequence:
>2325_bases ATGAGTCGAATAGAAAATTTCTTATACCTTTTATTATTGTGTTGTCTATCATCAAAGATGAATGCACAATTTATTACAGT TGATGATCAGCGTACCCCACAGCAGCTCATTGAAAATACTTTAGTTAATAGTTCATGTGCTGCTGTAACAAATATGAGTG GAAGCGGAGACAATTTTACCTCAGGCAAAAATAGTTTTGCTTACTTTAATGCAGGTACAAGCAATTTCCCTTTTAAAGAA GGTATTATACTTGCAACTTCGACAAGTGCAAATGCTATTGGCCCCTATTTAAGCAGTATGGGAGGAGGAAACCAAAATTG GATTGGAGATTCTGATCTTAATAATACTTTAGGTATAAGTTCAATAAATGCTACTTTTTTTGAATTTGATTTTGTTGCAT TAACAAATTTTGTAAGTTTCAATTATGTTTTTGCATCAAACGAATACCAGTATTATTTCCCATGTGAATATTCTGATGGA TTTGCTTTTTTAATAAAAGAAGAAGGAACTTCAGATCCGTATAGGAATTTAGCGGTTTTGCCAAACTCAAATACGCCTGT TTCCTCTACAAGTGTACATCCAAAAATAGTACCCGGGATTGCTTTAAATGGAGATCGTTACAATGGATGTGATGCAATAA ATGGAAATTATTTTTCTAAATTTAATGATAACACCAGCCCTATTAATTACGCAGGCCAAACTGTTGTTATGACGGCGCAG ACGAATGTAACTGCTGGAAAAAAATATCACATAAAACTAGTTATTGCAGATGATAAAAATGTGTATTATGACTCAGCAGT TTTTTTAGAAGCTGGAAGTTTTACTTCAAGTATAGATTTTGGTCCTGATAGAACCACATCTAATAATAGTTTATTATGCT TTGGTGATACTTTTTTACTTGATCCTAAATTATCTGCTTCGTACTCTTACAAATGGTTTAAAAATGGTGTAGAAATTGCA AATACACCAACTTTAAATGTTACTGATTCTGGCGATTACAAGGTCGAAGTTACATTAAGTCCCAGCACCTGCACCATAAA AGGGCAGATTAAAATTGAGTATGCGCCTGAAATCCTTTTAACAAACACTGCACTTTTACAATGTGATGATAACAGCGATG GAATTTCAATTTTCAATCTTACTAAAGTAAATAATATTGTAAAAAATAATGTTTCGAGCACTACAACTGAAGGTTATTAC ACAACATTAGCTGATGCTCAATCTAAAACAAATAAAATCACCTCGCCTGCTAATTATACAAATACTGCTGACAATCAAAT CATTTACGCCCGTTTAGAAAATGAGTTTGGATGCTACAAAACGGCCGAAGTAACATTACAAATCGCTGCAACATCAATTG CTGATCCTGCTCCTATAAGTACTTGTGATGGAGATGGAACTCAGGATGGACTATATCAGTTTGATCTTAATGCTGAAGTT ACTCCAAAAATTACGGCAGGACTTCCGAGTGGTTTAACTGTAAATTATTATTTGACAGCTAATGATGCTTTAACAGAAAC AAACCCGCAATTAAATATCTTTAAAAACACAACTCCTTATAATCAAACTATTTACGCACGAGTTGTAAATGGTCCGGATT GTTATGATGTTGTACCTGTTCCTCTCGTCGTAAATACTTTTGATCCGCCAAATTTTGAAAATGAATCTGAATATTTATGC AAAAATGATCAAATCACTTTAACCGTTGCAGCTGGATTCAGCAGTTATTTGTGGAGTAATGGAGAAACTTCAAATTCAGC AATAATTAGTGCTCCCGGCGATTACTCTGTAACAGTAAAAGATGCAAACGGCTGTGAAAAAACTAAAAATTTTAAAGTCA TATTATCAGAACCAGCTACAATAACAAATGCTGCTGTTAAAGATTTTTCCGGAAATGACAATTCTGTTTTAATAGAATAT ACCGGAACCGGAAACTACGAATTCTCTTTAGATGGATTAACTTTTCAAGATAATCCTTTGTTTACAGCTGTTGCAACAGG AACTTATAATGCAATTGCAAAAGATAAAAATGGCTGCGGATTATCAAATTCATTTTTGTTATATGTTTTAGATTATCCTA GATTTTTTACTCCAAACGGAGACGGTTATAATGACTTATGGGTTATCGAAGATTCTAATGTACTGCCTAATTACACAATT CATATTTTTGACCGCTATGGGAAATTTTTAAAAGAGATGAATCAAAACAGTCCGGGCTGGAACGGATTATTTAATGGACA GCAGCTCCCGTCTGATGATTATTGGTTTACTTTGACCTTTGCAGACGGCAGAAATGTAAAAGGTCATTTTAGCTTGAAAA GATAA
Upstream 100 bases:
>100_bases AGCTATTTTGCAATTTTAATTGTATTAGTGTGGACTTTTCTGTTCATACACTTTTCATATAAGCTATTAAAAAATCGAGA TTTGTAGTATATTTGCTACT
Downstream 100 bases:
>100_bases TGTATTAAAATTTCAATACCTGAAATTCTAAAGTCCGAATCCGAACTATACCATAAAAAAGAATCCCAAACTCCTAATGG AATTTGGGATTTTTTATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 774; Mature: 773
Protein sequence:
>774_residues MSRIENFLYLLLLCCLSSKMNAQFITVDDQRTPQQLIENTLVNSSCAAVTNMSGSGDNFTSGKNSFAYFNAGTSNFPFKE GIILATSTSANAIGPYLSSMGGGNQNWIGDSDLNNTLGISSINATFFEFDFVALTNFVSFNYVFASNEYQYYFPCEYSDG FAFLIKEEGTSDPYRNLAVLPNSNTPVSSTSVHPKIVPGIALNGDRYNGCDAINGNYFSKFNDNTSPINYAGQTVVMTAQ TNVTAGKKYHIKLVIADDKNVYYDSAVFLEAGSFTSSIDFGPDRTTSNNSLLCFGDTFLLDPKLSASYSYKWFKNGVEIA NTPTLNVTDSGDYKVEVTLSPSTCTIKGQIKIEYAPEILLTNTALLQCDDNSDGISIFNLTKVNNIVKNNVSSTTTEGYY TTLADAQSKTNKITSPANYTNTADNQIIYARLENEFGCYKTAEVTLQIAATSIADPAPISTCDGDGTQDGLYQFDLNAEV TPKITAGLPSGLTVNYYLTANDALTETNPQLNIFKNTTPYNQTIYARVVNGPDCYDVVPVPLVVNTFDPPNFENESEYLC KNDQITLTVAAGFSSYLWSNGETSNSAIISAPGDYSVTVKDANGCEKTKNFKVILSEPATITNAAVKDFSGNDNSVLIEY TGTGNYEFSLDGLTFQDNPLFTAVATGTYNAIAKDKNGCGLSNSFLLYVLDYPRFFTPNGDGYNDLWVIEDSNVLPNYTI HIFDRYGKFLKEMNQNSPGWNGLFNGQQLPSDDYWFTLTFADGRNVKGHFSLKR
Sequences:
>Translated_774_residues MSRIENFLYLLLLCCLSSKMNAQFITVDDQRTPQQLIENTLVNSSCAAVTNMSGSGDNFTSGKNSFAYFNAGTSNFPFKE GIILATSTSANAIGPYLSSMGGGNQNWIGDSDLNNTLGISSINATFFEFDFVALTNFVSFNYVFASNEYQYYFPCEYSDG FAFLIKEEGTSDPYRNLAVLPNSNTPVSSTSVHPKIVPGIALNGDRYNGCDAINGNYFSKFNDNTSPINYAGQTVVMTAQ TNVTAGKKYHIKLVIADDKNVYYDSAVFLEAGSFTSSIDFGPDRTTSNNSLLCFGDTFLLDPKLSASYSYKWFKNGVEIA NTPTLNVTDSGDYKVEVTLSPSTCTIKGQIKIEYAPEILLTNTALLQCDDNSDGISIFNLTKVNNIVKNNVSSTTTEGYY TTLADAQSKTNKITSPANYTNTADNQIIYARLENEFGCYKTAEVTLQIAATSIADPAPISTCDGDGTQDGLYQFDLNAEV TPKITAGLPSGLTVNYYLTANDALTETNPQLNIFKNTTPYNQTIYARVVNGPDCYDVVPVPLVVNTFDPPNFENESEYLC KNDQITLTVAAGFSSYLWSNGETSNSAIISAPGDYSVTVKDANGCEKTKNFKVILSEPATITNAAVKDFSGNDNSVLIEY TGTGNYEFSLDGLTFQDNPLFTAVATGTYNAIAKDKNGCGLSNSFLLYVLDYPRFFTPNGDGYNDLWVIEDSNVLPNYTI HIFDRYGKFLKEMNQNSPGWNGLFNGQQLPSDDYWFTLTFADGRNVKGHFSLKR >Mature_773_residues SRIENFLYLLLLCCLSSKMNAQFITVDDQRTPQQLIENTLVNSSCAAVTNMSGSGDNFTSGKNSFAYFNAGTSNFPFKEG IILATSTSANAIGPYLSSMGGGNQNWIGDSDLNNTLGISSINATFFEFDFVALTNFVSFNYVFASNEYQYYFPCEYSDGF AFLIKEEGTSDPYRNLAVLPNSNTPVSSTSVHPKIVPGIALNGDRYNGCDAINGNYFSKFNDNTSPINYAGQTVVMTAQT NVTAGKKYHIKLVIADDKNVYYDSAVFLEAGSFTSSIDFGPDRTTSNNSLLCFGDTFLLDPKLSASYSYKWFKNGVEIAN TPTLNVTDSGDYKVEVTLSPSTCTIKGQIKIEYAPEILLTNTALLQCDDNSDGISIFNLTKVNNIVKNNVSSTTTEGYYT TLADAQSKTNKITSPANYTNTADNQIIYARLENEFGCYKTAEVTLQIAATSIADPAPISTCDGDGTQDGLYQFDLNAEVT PKITAGLPSGLTVNYYLTANDALTETNPQLNIFKNTTPYNQTIYARVVNGPDCYDVVPVPLVVNTFDPPNFENESEYLCK NDQITLTVAAGFSSYLWSNGETSNSAIISAPGDYSVTVKDANGCEKTKNFKVILSEPATITNAAVKDFSGNDNSVLIEYT GTGNYEFSLDGLTFQDNPLFTAVATGTYNAIAKDKNGCGLSNSFLLYVLDYPRFFTPNGDGYNDLWVIEDSNVLPNYTIH IFDRYGKFLKEMNQNSPGWNGLFNGQQLPSDDYWFTLTFADGRNVKGHFSLKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84750; Mature: 84619
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIENFLYLLLLCCLSSKMNAQFITVDDQRTPQQLIENTLVNSSCAAVTNMSGSGDNFT CCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCC SGKNSFAYFNAGTSNFPFKEGIILATSTSANAIGPYLSSMGGGNQNWIGDSDLNNTLGIS CCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEE SINATFFEFDFVALTNFVSFNYVFASNEYQYYFPCEYSDGFAFLIKEEGTSDPYRNLAVL ECCCEEEEEEHHHEEEEEEEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEE PNSNTPVSSTSVHPKIVPGIALNGDRYNGCDAINGNYFSKFNDNTSPINYAGQTVVMTAQ CCCCCCCCCCCCCCEEECCEEECCCCCCCCCCCCCCEEEECCCCCCCEEECCCEEEEEEE TNVTAGKKYHIKLVIADDKNVYYDSAVFLEAGSFTSSIDFGPDRTTSNNSLLCFGDTFLL CCCCCCCEEEEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECEEEE DPKLSASYSYKWFKNGVEIANTPTLNVTDSGDYKVEVTLSPSTCTIKGQIKIEYAPEILL CCCCCCCEEEHHHCCCEEECCCCEEEEECCCCEEEEEEECCCEEEEEEEEEEEECCEEEE TNTALLQCDDNSDGISIFNLTKVNNIVKNNVSSTTTEGYYTTLADAQSKTNKITSPANYT ECEEEEEECCCCCCEEEEEEHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCCCCCCCCCC NTADNQIIYARLENEFGCYKTAEVTLQIAATSIADPAPISTCDGDGTQDGLYQFDLNAEV CCCCCEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCC TPKITAGLPSGLTVNYYLTANDALTETNPQLNIFKNTTPYNQTIYARVVNGPDCYDVVPV CCEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEC PLVVNTFDPPNFENESEYLCKNDQITLTVAAGFSSYLWSNGETSNSAIISAPGDYSVTVK CEEEECCCCCCCCCCCCEEECCCCEEEEEECCCHHHHCCCCCCCCCEEEECCCCEEEEEE DANGCEKTKNFKVILSEPATITNAAVKDFSGNDNSVLIEYTGTGNYEFSLDGLTFQDNPL CCCCCCCCCCEEEEEECCCEEEEHHHCCCCCCCCEEEEEEECCCCEEEEECCEEECCCCE FTAVATGTYNAIAKDKNGCGLSNSFLLYVLDYPRFFTPNGDGYNDLWVIEDSNVLPNYTI EEEEECCCCEEEECCCCCCCCCCCEEEEEEECCEEECCCCCCCCEEEEEECCCCCCCEEE HIFDRYGKFLKEMNQNSPGWNGLFNGQQLPSDDYWFTLTFADGRNVKGHFSLKR EEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECC >Mature Secondary Structure SRIENFLYLLLLCCLSSKMNAQFITVDDQRTPQQLIENTLVNSSCAAVTNMSGSGDNFT CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCC SGKNSFAYFNAGTSNFPFKEGIILATSTSANAIGPYLSSMGGGNQNWIGDSDLNNTLGIS CCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEE SINATFFEFDFVALTNFVSFNYVFASNEYQYYFPCEYSDGFAFLIKEEGTSDPYRNLAVL ECCCEEEEEEHHHEEEEEEEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEE PNSNTPVSSTSVHPKIVPGIALNGDRYNGCDAINGNYFSKFNDNTSPINYAGQTVVMTAQ CCCCCCCCCCCCCCEEECCEEECCCCCCCCCCCCCCEEEECCCCCCCEEECCCEEEEEEE TNVTAGKKYHIKLVIADDKNVYYDSAVFLEAGSFTSSIDFGPDRTTSNNSLLCFGDTFLL CCCCCCCEEEEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECEEEE DPKLSASYSYKWFKNGVEIANTPTLNVTDSGDYKVEVTLSPSTCTIKGQIKIEYAPEILL CCCCCCCEEEHHHCCCEEECCCCEEEEECCCCEEEEEEECCCEEEEEEEEEEEECCEEEE TNTALLQCDDNSDGISIFNLTKVNNIVKNNVSSTTTEGYYTTLADAQSKTNKITSPANYT ECEEEEEECCCCCCEEEEEEHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCCCCCCCCCC NTADNQIIYARLENEFGCYKTAEVTLQIAATSIADPAPISTCDGDGTQDGLYQFDLNAEV CCCCCEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCC TPKITAGLPSGLTVNYYLTANDALTETNPQLNIFKNTTPYNQTIYARVVNGPDCYDVVPV CCEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEC PLVVNTFDPPNFENESEYLCKNDQITLTVAAGFSSYLWSNGETSNSAIISAPGDYSVTVK CEEEECCCCCCCCCCCCEEECCCCEEEEEECCCHHHHCCCCCCCCCEEEECCCCEEEEEE DANGCEKTKNFKVILSEPATITNAAVKDFSGNDNSVLIEYTGTGNYEFSLDGLTFQDNPL CCCCCCCCCCEEEEEECCCEEEEHHHCCCCCCCCEEEEEEECCCCEEEEECCEEECCCCE FTAVATGTYNAIAKDKNGCGLSNSFLLYVLDYPRFFTPNGDGYNDLWVIEDSNVLPNYTI EEEEECCCCEEEECCCCCCCCCCCEEEEEEECCEEECCCCCCCCEEEEEECCCCCCCEEE HIFDRYGKFLKEMNQNSPGWNGLFNGQQLPSDDYWFTLTFADGRNVKGHFSLKR EEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA