Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146302651

Identifier: 146302651

GI number: 146302651

Start: 5943877

End: 5944935

Strand: Direct

Name: 146302651

Synonym: Fjoh_4924

Alternate gene names: NA

Gene position: 5943877-5944935 (Clockwise)

Preceding gene: 146302650

Following gene: 146302654

Centisome position: 97.49

GC content: 33.14

Gene sequence:

>1059_bases
ATGATTAATCTTTTCAACACCCACATCGACACGCTGGCAATACACCGCGTGGGAAACAAAAGCCGTAATGAGGCTATTTT
TTTATCAGAGCAGCCATTTAATTTAAATGATGAGATTGTTCCTTTGATAAAAGAATTCTTTTTTAAGCCTTTTAGAGAGA
AAGAAGAAAACTATTATCAGTTTGCACACGAAGTGGACTTGGACTACAACGACATGTTTAAATATGCAACTGAAATTTTT
GCTAATCCGGCTAATGTTCATGAGGTTTCTAAAAAAATCACAAAACATTTATACGAGCAGTCAAATCACCCGCACATTAA
AAACGGAGAGGTTTATGTTACTTATTTAACAAATCTGAGTATTGATAACAATGTTGTTGATGCAATTGGAATTTTTAAAA
GTGAGTTACAAGCCGACTTTTTACAGTTTGAAGAAAACGGAAGCAACCTGGAAATGATCTTGCAGCAAGGAATTAACCTG
AGCAAACTAGACAAAGGATGTTTAATTTTTAACTACAAAAAAGAAGAAGGATACAAAATCCTGACTGTAGACAGCAACCG
TTATGATGCACGTTACTGGTTAGAGCACTTTTTGTCTGTAGACGCTTTTGAAGATGAAAATTTCATCACTAAAAAATATT
TAAAATTCTGCCAGAACTTCGCAAAAGACGTTGTTTTGCCAGCTGAAGACAAGAAAGAGGAAGTAATGTTTATGAACCGA
TCTGTGAATTATTTCGCTAAAAACGATCAGTTTGAAGAGCAGAATTTCTTGAATGAAGTATTAGACAATCCTGAATTAAT
TCCTGAATTCAAAAACTACAAAGTTGATAAAGGAGAAAAATACAGCATCGAAGATGTAACCTCATTCCCTATTGCAAACG
CAGCAGTTTCTGACGCTAGAAAATCAATTAAAAACGTTATTAATCTGGATACACATATTCAAATTAAAATGGATTTTATT
AACCCTGAAAGTGCAGAAAAATTTGTTGAAAAAGGCTGGGATGAAGAAAAACAAATGTATTACTACTTAGTGTATTTCAA
TAAAGAAGAAAAAAGCTAA

Upstream 100 bases:

>100_bases
AGAGAATTAGAACGAATGTTAAGTTCTTTTATTCGAAGAATAAAAGACAGAAAATAACCTTTGTCCCTTTGAACCTCTGC
AACTCTGAACCTATAAACAC

Downstream 100 bases:

>100_bases
GAAGTTTTCATTTTCTATTACTTACTTAAAACAAAAAACGGCAGTTACAAATGTAACTGCCGTTTTTTATTGAAATTGAT
TTTCTAAAACAATGCGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MINLFNTHIDTLAIHRVGNKSRNEAIFLSEQPFNLNDEIVPLIKEFFFKPFREKEENYYQFAHEVDLDYNDMFKYATEIF
ANPANVHEVSKKITKHLYEQSNHPHIKNGEVYVTYLTNLSIDNNVVDAIGIFKSELQADFLQFEENGSNLEMILQQGINL
SKLDKGCLIFNYKKEEGYKILTVDSNRYDARYWLEHFLSVDAFEDENFITKKYLKFCQNFAKDVVLPAEDKKEEVMFMNR
SVNYFAKNDQFEEQNFLNEVLDNPELIPEFKNYKVDKGEKYSIEDVTSFPIANAAVSDARKSIKNVINLDTHIQIKMDFI
NPESAEKFVEKGWDEEKQMYYYLVYFNKEEKS

Sequences:

>Translated_352_residues
MINLFNTHIDTLAIHRVGNKSRNEAIFLSEQPFNLNDEIVPLIKEFFFKPFREKEENYYQFAHEVDLDYNDMFKYATEIF
ANPANVHEVSKKITKHLYEQSNHPHIKNGEVYVTYLTNLSIDNNVVDAIGIFKSELQADFLQFEENGSNLEMILQQGINL
SKLDKGCLIFNYKKEEGYKILTVDSNRYDARYWLEHFLSVDAFEDENFITKKYLKFCQNFAKDVVLPAEDKKEEVMFMNR
SVNYFAKNDQFEEQNFLNEVLDNPELIPEFKNYKVDKGEKYSIEDVTSFPIANAAVSDARKSIKNVINLDTHIQIKMDFI
NPESAEKFVEKGWDEEKQMYYYLVYFNKEEKS
>Mature_352_residues
MINLFNTHIDTLAIHRVGNKSRNEAIFLSEQPFNLNDEIVPLIKEFFFKPFREKEENYYQFAHEVDLDYNDMFKYATEIF
ANPANVHEVSKKITKHLYEQSNHPHIKNGEVYVTYLTNLSIDNNVVDAIGIFKSELQADFLQFEENGSNLEMILQQGINL
SKLDKGCLIFNYKKEEGYKILTVDSNRYDARYWLEHFLSVDAFEDENFITKKYLKFCQNFAKDVVLPAEDKKEEVMFMNR
SVNYFAKNDQFEEQNFLNEVLDNPELIPEFKNYKVDKGEKYSIEDVTSFPIANAAVSDARKSIKNVINLDTHIQIKMDFI
NPESAEKFVEKGWDEEKQMYYYLVYFNKEEKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41600; Mature: 41600

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLFNTHIDTLAIHRVGNKSRNEAIFLSEQPFNLNDEIVPLIKEFFFKPFREKEENYYQ
CCEEECCCHHHHHEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
FAHEVDLDYNDMFKYATEIFANPANVHEVSKKITKHLYEQSNHPHIKNGEVYVTYLTNLS
HHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECC
IDNNVVDAIGIFKSELQADFLQFEENGSNLEMILQQGINLSKLDKGCLIFNYKKEEGYKI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCCEEEEEEECCCCEEE
LTVDSNRYDARYWLEHFLSVDAFEDENFITKKYLKFCQNFAKDVVLPAEDKKEEVMFMNR
EEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
SVNYFAKNDQFEEQNFLNEVLDNPELIPEFKNYKVDKGEKYSIEDVTSFPIANAAVSDAR
CCCEEECCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHHH
KSIKNVINLDTHIQIKMDFINPESAEKFVEKGWDEEKQMYYYLVYFNKEEKS
HHHHHHHCCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEEEEEEEECCCCC
>Mature Secondary Structure
MINLFNTHIDTLAIHRVGNKSRNEAIFLSEQPFNLNDEIVPLIKEFFFKPFREKEENYYQ
CCEEECCCHHHHHEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
FAHEVDLDYNDMFKYATEIFANPANVHEVSKKITKHLYEQSNHPHIKNGEVYVTYLTNLS
HHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECC
IDNNVVDAIGIFKSELQADFLQFEENGSNLEMILQQGINLSKLDKGCLIFNYKKEEGYKI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCCEEEEEEECCCCEEE
LTVDSNRYDARYWLEHFLSVDAFEDENFITKKYLKFCQNFAKDVVLPAEDKKEEVMFMNR
EEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
SVNYFAKNDQFEEQNFLNEVLDNPELIPEFKNYKVDKGEKYSIEDVTSFPIANAAVSDAR
CCCEEECCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHHH
KSIKNVINLDTHIQIKMDFINPESAEKFVEKGWDEEKQMYYYLVYFNKEEKS
HHHHHHHCCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA