| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302649
Identifier: 146302649
GI number: 146302649
Start: 5942815
End: 5943357
Strand: Direct
Name: 146302649
Synonym: Fjoh_4922
Alternate gene names: NA
Gene position: 5942815-5943357 (Clockwise)
Preceding gene: 146302648
Following gene: 146302650
Centisome position: 97.47
GC content: 36.46
Gene sequence:
>543_bases ATGGTTTATAAATTTAGAGTAATTCTAGACGCCGAAGAAGATATTTTTAGAGACATTGCAATTCTTGAAGACGATACTCT TGAAGATTTACACAATGCAATCTTCAACGCTTTTGGTTTTGACGGATCTGAAGTGGCTTCATTCTATACTTGTGATGAAA CTTGGAATCAGGAAGATGAAATTCCTCTTTTTGATACAGGAGATGTTCCTGGCGAAATAAGAACCATGAACGATTATCCG TTGTCTAGTATTTTAGATAAACAAAATACAAAGATTATCTACGTTTACGATTTCATCAGCATGTGGACTTTCTTAGTAGA ATTAGCTGCTGTTGAAGATGAAGCTGTTGGAGCAACTTACCCGGAAACTTTATTTTCTCATGGTGAAATGCCAGACGAAG CTCTTGAAAAAAACTTTGAAGCTGATGATATGCACAACGATATCTACGGAGAATTTGAAGACGACCTAGATGAAGACGAT CTAGACATGTTCGAAGGAGATGACAGTTTCGAGGATTATGGATTTGAGGAGAATTGGAATTAG
Upstream 100 bases:
>100_bases TAATCAGAAAAATGAAAAAATCTTTTCAACAAATCGTAATTCACAATTCGGATTTCGTTTTTTATATTTTACCTTTGACC TCTCAATAAAAACAAAGATT
Downstream 100 bases:
>100_bases TTTTCCTTAGGTACAAAGGTTCAAAGAGGCAAAGGTTCAGAGGTTTTTATTTTAAAATCTTTGATTTTAAAATGTAAGAA TATTTTTATTTTTGTGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MVYKFRVILDAEEDIFRDIAILEDDTLEDLHNAIFNAFGFDGSEVASFYTCDETWNQEDEIPLFDTGDVPGEIRTMNDYP LSSILDKQNTKIIYVYDFISMWTFLVELAAVEDEAVGATYPETLFSHGEMPDEALEKNFEADDMHNDIYGEFEDDLDEDD LDMFEGDDSFEDYGFEENWN
Sequences:
>Translated_180_residues MVYKFRVILDAEEDIFRDIAILEDDTLEDLHNAIFNAFGFDGSEVASFYTCDETWNQEDEIPLFDTGDVPGEIRTMNDYP LSSILDKQNTKIIYVYDFISMWTFLVELAAVEDEAVGATYPETLFSHGEMPDEALEKNFEADDMHNDIYGEFEDDLDEDD LDMFEGDDSFEDYGFEENWN >Mature_180_residues MVYKFRVILDAEEDIFRDIAILEDDTLEDLHNAIFNAFGFDGSEVASFYTCDETWNQEDEIPLFDTGDVPGEIRTMNDYP LSSILDKQNTKIIYVYDFISMWTFLVELAAVEDEAVGATYPETLFSHGEMPDEALEKNFEADDMHNDIYGEFEDDLDEDD LDMFEGDDSFEDYGFEENWN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20900; Mature: 20900
Theoretical pI: Translated: 3.39; Mature: 3.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYKFRVILDAEEDIFRDIAILEDDTLEDLHNAIFNAFGFDGSEVASFYTCDETWNQEDE CEEEEEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHEEEECCCCCCCCCC IPLFDTGDVPGEIRTMNDYPLSSILDKQNTKIIYVYDFISMWTFLVELAAVEDEAVGATY CCEEECCCCCCCEEECCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCC PETLFSHGEMPDEALEKNFEADDMHNDIYGEFEDDLDEDDLDMFEGDDSFEDYGFEENWN HHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCC >Mature Secondary Structure MVYKFRVILDAEEDIFRDIAILEDDTLEDLHNAIFNAFGFDGSEVASFYTCDETWNQEDE CEEEEEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHEEEECCCCCCCCCC IPLFDTGDVPGEIRTMNDYPLSSILDKQNTKIIYVYDFISMWTFLVELAAVEDEAVGATY CCEEECCCCCCCEEECCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCC PETLFSHGEMPDEALEKNFEADDMHNDIYGEFEDDLDEDDLDMFEGDDSFEDYGFEENWN HHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA