| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146302642
Identifier: 146302642
GI number: 146302642
Start: 5935577
End: 5935984
Strand: Reverse
Name: 146302642
Synonym: Fjoh_4915
Alternate gene names: NA
Gene position: 5935984-5935577 (Counterclockwise)
Preceding gene: 146302643
Following gene: 146302641
Centisome position: 97.36
GC content: 31.62
Gene sequence:
>408_bases ATGACCAAAATTATTACAATAACCATTTTATTTATCTGCAGCTTAATGTCTGCTCAAAATGTAAAATTAACTGTTGCTGT TTCGGGTTTAAAAAACAATACAGGAATTGTTAAAGTAGGATTATATAATTCAGAAGGGACGTTTCTTAAAACAACTTACA AAAGCCTTAATTCTGAAATTGTAAATAATAAAGCAGTTGTAACTTTTGATAATCTTCCTGCTGGAGAATATGCCATCTCG ACTTATCATGATGAAAACATCAACGGAAAACTTGACAGAAATGCAATGGGAATTCCATCTGAAGAATATGCAGCTTCAAA CAATGCAAAAGGATTTATGGGGCCGCCTTCGTATAAAGATGCTAAATTTGATGTCAGTAAAGATTCAAAAATCGAAATTC AATTCTAG
Upstream 100 bases:
>100_bases TCATCAACAAAAAAAACTTAGAACAAAAAAAACTTAGAACAAAAAAAACTTAGAACCTTAGCAGCTCAGAATCTTAGAAC CTTAAAAAAAAATAGAAATC
Downstream 100 bases:
>100_bases ATATATAACTAATCCATATAAACAAACCATTAAATAACTTATAAAATGAAAAAAATCATCACTTTAATCGCATTATTTGT AGTAGTAATAAGTTCAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTKIITITILFICSLMSAQNVKLTVAVSGLKNNTGIVKVGLYNSEGTFLKTTYKSLNSEIVNNKAVVTFDNLPAGEYAIS TYHDENINGKLDRNAMGIPSEEYAASNNAKGFMGPPSYKDAKFDVSKDSKIEIQF
Sequences:
>Translated_135_residues MTKIITITILFICSLMSAQNVKLTVAVSGLKNNTGIVKVGLYNSEGTFLKTTYKSLNSEIVNNKAVVTFDNLPAGEYAIS TYHDENINGKLDRNAMGIPSEEYAASNNAKGFMGPPSYKDAKFDVSKDSKIEIQF >Mature_134_residues TKIITITILFICSLMSAQNVKLTVAVSGLKNNTGIVKVGLYNSEGTFLKTTYKSLNSEIVNNKAVVTFDNLPAGEYAIST YHDENINGKLDRNAMGIPSEEYAASNNAKGFMGPPSYKDAKFDVSKDSKIEIQF
Specific function: Unknown
COG id: COG4704
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14739; Mature: 14608
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIITITILFICSLMSAQNVKLTVAVSGLKNNTGIVKVGLYNSEGTFLKTTYKSLNSEI CCEEEEEHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEHHHHHHHH VNNKAVVTFDNLPAGEYAISTYHDENINGKLDRNAMGIPSEEYAASNNAKGFMGPPSYKD CCCCEEEEECCCCCCCEEEEEEECCCCCCEECCCCCCCCCHHHCCCCCCCCCCCCCCCCC AKFDVSKDSKIEIQF CEEECCCCCEEEEEC >Mature Secondary Structure TKIITITILFICSLMSAQNVKLTVAVSGLKNNTGIVKVGLYNSEGTFLKTTYKSLNSEI CEEEEEHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEHHHHHHHH VNNKAVVTFDNLPAGEYAISTYHDENINGKLDRNAMGIPSEEYAASNNAKGFMGPPSYKD CCCCEEEEECCCCCCCEEEEEEECCCCCCEECCCCCCCCCHHHCCCCCCCCCCCCCCCCC AKFDVSKDSKIEIQF CEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA