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The map label for this gene is uidR [C]

Identifier: 146302628

GI number: 146302628

Start: 5922634

End: 5923263

Strand: Direct

Name: uidR [C]

Synonym: Fjoh_4901

Alternate gene names: 146302628

Gene position: 5922634-5923263 (Clockwise)

Preceding gene: 146302627

Following gene: 146302629

Centisome position: 97.14

GC content: 31.11

Gene sequence:

>630_bases
ATGTCACAGATCGAATTAAACGAGAAAAAAATTCAAATACTTAACGTTGCAGAAAAGCTGTTTTCTGAGAAGGGATTTGA
GGGGACATCTATACGGGACATTTCAAAAGAGGCAAAAATTAACATTGCTATGGTTTCGTATTATTTTGGTTCAAAAGAAA
GACTTCTGGAAGCTTTAATTCTTTACAAAACTGTTGATTTAAAATTACAACTCGAAAACTTACTACAAGAAAACATTGAA
CCTCTTGATAAAGTCAATAAATTAATCGAAATTTACGTTAACAGAATCTGCCTTAACAAAGGGATTTACAGGGTTTTACA
TTTTGAACTTTACAACAAAAAGAGAGAAAAAAGCCTGCAGGCATTTACTGAACTTAAAAAAGGAAACTTAAAGTCAGTTG
AAAGCATTATCAAGCAGGGTCAGGATCAGGGAGTTTTTAGAAAAGATGTTAATATCCAACTTATTACACCAACCATTATC
GGAACCTTTTTTCACTTTCATATGAACCGTTCATTCTTTGAAGAATTATTGGGGTTAAAAACAGAAGAAATGTTTAACAA
TTACATTAACAACGATCTAAAAAAGCACATTCAACAAACTATAAAAGCGCTACTTGTTTATGAAAATTAG

Upstream 100 bases:

>100_bases
ACTACTACACCGTTTTATGTTAATATTATGTTAAAATAAAATTAAACAAGCGTTTAAATTAAACAACTGTTTAATTTTGC
ATCCGATTAGAAACAATACC

Downstream 100 bases:

>100_bases
TCAATTAATGCTCTTTGGAGTTTTCTTTATCGGAATTTCTTCAATAGAAGCACAAGAAAAAACAAGTTTAACTTTAGATG
AAGCCGTAAAAATGGCCTGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein Tetr; Regulatory Protein TetR

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSQIELNEKKIQILNVAEKLFSEKGFEGTSIRDISKEAKINIAMVSYYFGSKERLLEALILYKTVDLKLQLENLLQENIE
PLDKVNKLIEIYVNRICLNKGIYRVLHFELYNKKREKSLQAFTELKKGNLKSVESIIKQGQDQGVFRKDVNIQLITPTII
GTFFHFHMNRSFFEELLGLKTEEMFNNYINNDLKKHIQQTIKALLVYEN

Sequences:

>Translated_209_residues
MSQIELNEKKIQILNVAEKLFSEKGFEGTSIRDISKEAKINIAMVSYYFGSKERLLEALILYKTVDLKLQLENLLQENIE
PLDKVNKLIEIYVNRICLNKGIYRVLHFELYNKKREKSLQAFTELKKGNLKSVESIIKQGQDQGVFRKDVNIQLITPTII
GTFFHFHMNRSFFEELLGLKTEEMFNNYINNDLKKHIQQTIKALLVYEN
>Mature_208_residues
SQIELNEKKIQILNVAEKLFSEKGFEGTSIRDISKEAKINIAMVSYYFGSKERLLEALILYKTVDLKLQLENLLQENIEP
LDKVNKLIEIYVNRICLNKGIYRVLHFELYNKKREKSLQAFTELKKGNLKSVESIIKQGQDQGVFRKDVNIQLITPTIIG
TFFHFHMNRSFFEELLGLKTEEMFNNYINNDLKKHIQQTIKALLVYEN

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24537; Mature: 24406

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQIELNEKKIQILNVAEKLFSEKGFEGTSIRDISKEAKINIAMVSYYFGSKERLLEALI
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEEEEEHHCCHHHHHHHHH
LYKTVDLKLQLENLLQENIEPLDKVNKLIEIYVNRICLNKGIYRVLHFELYNKKREKSLQ
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFTELKKGNLKSVESIIKQGQDQGVFRKDVNIQLITPTIIGTFFHFHMNRSFFEELLGLK
HHHHHHCCCHHHHHHHHHCCCCCCCEEECCCEEEEHHHHHHHHHHHHCCHHHHHHHHCCC
TEEMFNNYINNDLKKHIQQTIKALLVYEN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQIELNEKKIQILNVAEKLFSEKGFEGTSIRDISKEAKINIAMVSYYFGSKERLLEALI
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEEEEEHHCCHHHHHHHHH
LYKTVDLKLQLENLLQENIEPLDKVNKLIEIYVNRICLNKGIYRVLHFELYNKKREKSLQ
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFTELKKGNLKSVESIIKQGQDQGVFRKDVNIQLITPTIIGTFFHFHMNRSFFEELLGLK
HHHHHHCCCHHHHHHHHHCCCCCCCEEECCCEEEEHHHHHHHHHHHHCCHHHHHHHHCCC
TEEMFNNYINNDLKKHIQQTIKALLVYEN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA