| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302571
Identifier: 146302571
GI number: 146302571
Start: 5863493
End: 5864602
Strand: Reverse
Name: 146302571
Synonym: Fjoh_4844
Alternate gene names: NA
Gene position: 5864602-5863493 (Counterclockwise)
Preceding gene: 146302586
Following gene: 146302570
Centisome position: 96.19
GC content: 30.54
Gene sequence:
>1110_bases ATGAGAAAAATTACTCAAGATGATATTCAAAGTGACTATAAAGAAGCGATTCGAGAGAAATATAGAGTTGAAAAAAATGA AGGAAAATATTCTGATTACTTAAGCAATCCTTCACAAGCAGCTTTAAGAGATTTATGCTGGGAAATTTTCAATTTAGAAC CTACAGTCGATGACCTTGCAGTATATCGTAACTTTTTTAAAGCTGATTTTATCCCAAGAGAGGTAGATACTTCACAGCAA TACACAGATAAGTTTAAAAAGGTAGGTGCTTTTTTTAAAGCGGAAAGAGAAACAGCTAAAATTAGTACGGTTGAATTAGC AGCAATTTTGGTAGATTTTCAACCTAGACCTTTTAATAAGTTTAGAAAAGAAATTGATCCACAGAATTTGAAATTGATAG AAGAACTAAGAAAAAACAAACATTACAAGCCTGAAATTTCTTCTAATGGTTTTATTGATGAGGTCGAAATTAAAAAAAAA ACTAATTTAAAAACCGAGGAAACAGAAAAAGAAAAAACATACGTGCCTCTCCCATTTATAGCAAAAGACAGTTATGGTGC TAATATAAAAGAATATGAAATTACACAGACTTCTCAATCTGAAACAAATCCTACCGAGAGTAATTGTGATGAAACAGATA AATCTAAAGCACAGGAATCTAAACCAAAAAGGGAAAAGCTTTTTAGGAGAATTAGACAGATTTTATTTGAAAATTTCCTA AAACGATTAGGAAAAACAGCTGCGGTTATTATTTTAATTTTTTGTTCAATTGGTGGAGTAGTTTATTTTGCCTTCTTTAA AAAACATTGTATGCAGTGGACAGGTGATCATTATGAAATTGTAGATTGTTCTTCTAAAATAACACCAGGTTCTTGTGTAA TAATTCCACTTGATGAAAGCCTATTAGATTTTAGAAAATTAAATGCTTGTGACACTACAACTTGTTTTAAGAAAAATGGA GAAGCTTTTGTTTGGTATGGGAAAACAGCAAATGGTGTTGATTTTTTTAATGATAATGGCAACGGAAGACATCCAGAAAC AAATGTATCTTTAAGACCGGTAACAAATTATATGTTTAATAAATATTTAAAGGGCAAGCCATGTGAGTAG
Upstream 100 bases:
>100_bases GCCTGTATTGATACGGATTTCCGGGATTTCCTGATTCTCCGATGACGTCCGATAAAAACTTGAAAAAACCGATAATAAAT CCTGAAAATCCTAATAGCTT
Downstream 100 bases:
>100_bases CAATTTTTAAAAATAATTTTATAAATCTCTAAAATGCGATTTATGTAATAAATTCTTTAAATCATGAAATTTTTTGTAAG TATATCCTTTTAATTTAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MRKITQDDIQSDYKEAIREKYRVEKNEGKYSDYLSNPSQAALRDLCWEIFNLEPTVDDLAVYRNFFKADFIPREVDTSQQ YTDKFKKVGAFFKAERETAKISTVELAAILVDFQPRPFNKFRKEIDPQNLKLIEELRKNKHYKPEISSNGFIDEVEIKKK TNLKTEETEKEKTYVPLPFIAKDSYGANIKEYEITQTSQSETNPTESNCDETDKSKAQESKPKREKLFRRIRQILFENFL KRLGKTAAVIILIFCSIGGVVYFAFFKKHCMQWTGDHYEIVDCSSKITPGSCVIIPLDESLLDFRKLNACDTTTCFKKNG EAFVWYGKTANGVDFFNDNGNGRHPETNVSLRPVTNYMFNKYLKGKPCE
Sequences:
>Translated_369_residues MRKITQDDIQSDYKEAIREKYRVEKNEGKYSDYLSNPSQAALRDLCWEIFNLEPTVDDLAVYRNFFKADFIPREVDTSQQ YTDKFKKVGAFFKAERETAKISTVELAAILVDFQPRPFNKFRKEIDPQNLKLIEELRKNKHYKPEISSNGFIDEVEIKKK TNLKTEETEKEKTYVPLPFIAKDSYGANIKEYEITQTSQSETNPTESNCDETDKSKAQESKPKREKLFRRIRQILFENFL KRLGKTAAVIILIFCSIGGVVYFAFFKKHCMQWTGDHYEIVDCSSKITPGSCVIIPLDESLLDFRKLNACDTTTCFKKNG EAFVWYGKTANGVDFFNDNGNGRHPETNVSLRPVTNYMFNKYLKGKPCE >Mature_369_residues MRKITQDDIQSDYKEAIREKYRVEKNEGKYSDYLSNPSQAALRDLCWEIFNLEPTVDDLAVYRNFFKADFIPREVDTSQQ YTDKFKKVGAFFKAERETAKISTVELAAILVDFQPRPFNKFRKEIDPQNLKLIEELRKNKHYKPEISSNGFIDEVEIKKK TNLKTEETEKEKTYVPLPFIAKDSYGANIKEYEITQTSQSETNPTESNCDETDKSKAQESKPKREKLFRRIRQILFENFL KRLGKTAAVIILIFCSIGGVVYFAFFKKHCMQWTGDHYEIVDCSSKITPGSCVIIPLDESLLDFRKLNACDTTTCFKKNG EAFVWYGKTANGVDFFNDNGNGRHPETNVSLRPVTNYMFNKYLKGKPCE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42869; Mature: 42869
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKITQDDIQSDYKEAIREKYRVEKNEGKYSDYLSNPSQAALRDLCWEIFNLEPTVDDLA CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHH VYRNFFKADFIPREVDTSQQYTDKFKKVGAFFKAERETAKISTVELAAILVDFQPRPFNK HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHEECCCCCHHH FRKEIDPQNLKLIEELRKNKHYKPEISSNGFIDEVEIKKKTNLKTEETEKEKTYVPLPFI HHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHEEHHHHCCCCCCHHHCCCCCCCCCEE AKDSYGANIKEYEITQTSQSETNPTESNCDETDKSKAQESKPKREKLFRRIRQILFENFL ECCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KRLGKTAAVIILIFCSIGGVVYFAFFKKHCMQWTGDHYEIVDCSSKITPGSCVIIPLDES HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCHH LLDFRKLNACDTTTCFKKNGEAFVWYGKTANGVDFFNDNGNGRHPETNVSLRPVTNYMFN HHHHHHCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHH KYLKGKPCE HHCCCCCCC >Mature Secondary Structure MRKITQDDIQSDYKEAIREKYRVEKNEGKYSDYLSNPSQAALRDLCWEIFNLEPTVDDLA CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHH VYRNFFKADFIPREVDTSQQYTDKFKKVGAFFKAERETAKISTVELAAILVDFQPRPFNK HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHEECCCCCHHH FRKEIDPQNLKLIEELRKNKHYKPEISSNGFIDEVEIKKKTNLKTEETEKEKTYVPLPFI HHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHEEHHHHCCCCCCHHHCCCCCCCCCEE AKDSYGANIKEYEITQTSQSETNPTESNCDETDKSKAQESKPKREKLFRRIRQILFENFL ECCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KRLGKTAAVIILIFCSIGGVVYFAFFKKHCMQWTGDHYEIVDCSSKITPGSCVIIPLDES HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCHH LLDFRKLNACDTTTCFKKNGEAFVWYGKTANGVDFFNDNGNGRHPETNVSLRPVTNYMFN HHHHHHCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHH KYLKGKPCE HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA