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The map label for this gene is ureB

Identifier: 146302563

GI number: 146302563

Start: 5854005

End: 5854373

Strand: Reverse

Name: ureB

Synonym: Fjoh_4836

Alternate gene names: 146302563

Gene position: 5854373-5854005 (Counterclockwise)

Preceding gene: 146302564

Following gene: 146302562

Centisome position: 96.02

GC content: 36.59

Gene sequence:

>369_bases
ATGATTCCGGGAGAATATTTTATCAGTAAGGGAGACATTGAGTGTAATGTTGACCGAAAAACAACTAAAATAAAAGTAAT
CAACACAGGTGACCGTCCAATACAAGTAGGATCTCACTGCCATTTTTTTGAAATCAATCGTATGATGAGTTTCGATCGCA
GTGAAGCTTTTGGAATGCGTCTTAACATTGCCGCCGGAACAGCAGTTCGTTTTGAACCCGGCGAAGAAAAAGAAGTAGAA
TTAGTTGCATTTAGTGGAGCAAGACGTGCATTTGGTATCAACAATATCGTGAACGGAGATACTACACTAGAAATAAACAA
ACAACATAGTTTGGCAAAACTGAAAACTGAAAACTTTAAAAATAAATAA

Upstream 100 bases:

>100_bases
TGAGATGATACATGATGTTCAAATCGAGGCAACATTTCCTGACGGAACTAAATTAGTTACAGTTCACAGTCCTATTCGTT
AAACTCAAAAAATTAAAATT

Downstream 100 bases:

>100_bases
TTATGAGCCTGAAAATAAATAAGCTGAAATATGCCAGCATGTATGGTCCTACAAAAGGAGATAAAATTAGACTGGCCGAC
ACAGATATCATTGTTGAGAT

Product: urease subunit beta

Products: NA

Alternate protein names: Urea amidohydrolase subunit beta

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MIPGEYFISKGDIECNVDRKTTKIKVINTGDRPIQVGSHCHFFEINRMMSFDRSEAFGMRLNIAAGTAVRFEPGEEKEVE
LVAFSGARRAFGINNIVNGDTTLEINKQHSLAKLKTENFKNK

Sequences:

>Translated_122_residues
MIPGEYFISKGDIECNVDRKTTKIKVINTGDRPIQVGSHCHFFEINRMMSFDRSEAFGMRLNIAAGTAVRFEPGEEKEVE
LVAFSGARRAFGINNIVNGDTTLEINKQHSLAKLKTENFKNK
>Mature_122_residues
MIPGEYFISKGDIECNVDRKTTKIKVINTGDRPIQVGSHCHFFEINRMMSFDRSEAFGMRLNIAAGTAVRFEPGEEKEVE
LVAFSGARRAFGINNIVNGDTTLEINKQHSLAKLKTENFKNK

Specific function: Unknown

COG id: COG0832

COG function: function code E; Urea amidohydrolase (urease) beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the urease beta subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URE2_FLAJ1 (A5FAD2)

Other databases:

- EMBL:   CP000685
- RefSeq:   YP_001197154.1
- ProteinModelPortal:   A5FAD2
- SMR:   A5FAD2
- STRING:   A5FAD2
- GeneID:   5089464
- GenomeReviews:   CP000685_GR
- KEGG:   fjo:Fjoh_4836
- eggNOG:   COG0832
- HOGENOM:   HBG365918
- OMA:   TLEVSNT
- ProtClustDB:   CLSK2538018
- BioCyc:   FJOH376686:FJOH_4836-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01954
- InterPro:   IPR002019
- Gene3D:   G3DSA:2.10.150.10
- TIGRFAMs:   TIGR00192

Pfam domain/function: PF00699 Urease_beta; SSF51278 Urease_beta

EC number: =3.5.1.5

Molecular weight: Translated: 13738; Mature: 13738

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPGEYFISKGDIECNVDRKTTKIKVINTGDRPIQVGSHCHFFEINRMMSFDRSEAFGMR
CCCCCEEEECCCEEEEECCCEEEEEEEECCCCEEEECCEEEEEEECCHHCCCCCCCCCEE
LNIAAGTAVRFEPGEEKEVELVAFSGARRAFGINNIVNGDTTLEINKQHSLAKLKTENFK
EEEECCCEEEECCCCCCEEEEEEECCCCCEECCCCEECCCEEEEECCCCCEEEEECCCCC
NK
CC
>Mature Secondary Structure
MIPGEYFISKGDIECNVDRKTTKIKVINTGDRPIQVGSHCHFFEINRMMSFDRSEAFGMR
CCCCCEEEECCCEEEEECCCEEEEEEEECCCCEEEECCEEEEEEECCHHCCCCCCCCCEE
LNIAAGTAVRFEPGEEKEVELVAFSGARRAFGINNIVNGDTTLEINKQHSLAKLKTENFK
EEEECCCEEEECCCCCCEEEEEEECCCCCEECCCCEECCCEEEEECCCCCEEEEECCCCC
NK
CC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA