| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302556
Identifier: 146302556
GI number: 146302556
Start: 5847767
End: 5848627
Strand: Reverse
Name: 146302556
Synonym: Fjoh_4829
Alternate gene names: NA
Gene position: 5848627-5847767 (Counterclockwise)
Preceding gene: 146302557
Following gene: 146302555
Centisome position: 95.93
GC content: 36.12
Gene sequence:
>861_bases ATGAAATCAAAAATTAGTCTTTATAGTAAAACAATTTTGACCAGTATAGGTCAAATCATGCTGCAGGAAAATCCGTGGAC AGGATTACTTTTTCTAGCCGGTATATTTTATGGATCTGTGGTAATGGGAATTGCGGCAATTTTATCTGCAGTAACAGCAT TAATTACAGCTTTGTTATTAAAATTTGATAAAAATGAGACAGAGCAGGGGCTTTATGGTTTTAGTGCCACCCTTGTAGGA GTTGCGTTAACCTTCTTTTTTAAACCAGAACCTGTAATATGGATTGCTATTATTGCAGGATCTTCATTAGCGGCTATTTT ACAGCATGTTTTTATAAAAAGAAAAATACCGGTATTTACATTGCCATTCATAATTATTACCTGGATTGGGTTGTATATTT TTCACAATGTATTTATTATTGGGGGGCCTGTATCAGGATCAGAACTTTTAAATGATCAAAACGAACTGGCTACAGTGGCC CACGGCTTTGGAGAAGTAATTTTTCAGGGCAGTATTCTTGCCGGAGTTATCTTTATTTTGGCAGTATTTATCAATAATCC TGTAGCGGCTTTGTATGCTATAGCATCAGGAGTATTGAGTGCTTACATATCGCTTCAGTTTTCAGAACCGCAAACTGATA TACACATGGGATTGTTTAGTTTTAATGCGGTGCTTTGTGCCATAACTTTCTCAGGAACCCGCGTTAGAGACGGAATTTAT GTACTGTTTTCAATTTTGGTTTCAACCTTATTCGATATTTATATGGTAAAAATGGGATGGGCTCCTCTTACTTTTCCTTT CGTGGCCTCCAGCTGGATTACTCTTTTGCTTAAAAAAAGTGTTCCTGCAAAATATAGATAA
Upstream 100 bases:
>100_bases AACAGACAAACTAGAGCGTTATGTGCATGCAATTGGCGGCGGAGTCGTGACAATATGCGGTATTGGAATGGTATTTCTAG GATGGTAAAATTTTAAAATT
Downstream 100 bases:
>100_bases TTGAAAAATCTTCAAATTAAATAATCAAATTAAAATGAAAAAATATGCCTTATTAAGCACATTGTTTTTTGCAGTGTGCT ATTCAGCCTGCGCTCAGGTT
Product: Urea transporter
Products: NA
Alternate protein names: Eukaryotic-Type Low-Affinity Urea Transporter; Urea Transport Protein ApUT; UreA Transporter
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKSKISLYSKTILTSIGQIMLQENPWTGLLFLAGIFYGSVVMGIAAILSAVTALITALLLKFDKNETEQGLYGFSATLVG VALTFFFKPEPVIWIAIIAGSSLAAILQHVFIKRKIPVFTLPFIIITWIGLYIFHNVFIIGGPVSGSELLNDQNELATVA HGFGEVIFQGSILAGVIFILAVFINNPVAALYAIASGVLSAYISLQFSEPQTDIHMGLFSFNAVLCAITFSGTRVRDGIY VLFSILVSTLFDIYMVKMGWAPLTFPFVASSWITLLLKKSVPAKYR
Sequences:
>Translated_286_residues MKSKISLYSKTILTSIGQIMLQENPWTGLLFLAGIFYGSVVMGIAAILSAVTALITALLLKFDKNETEQGLYGFSATLVG VALTFFFKPEPVIWIAIIAGSSLAAILQHVFIKRKIPVFTLPFIIITWIGLYIFHNVFIIGGPVSGSELLNDQNELATVA HGFGEVIFQGSILAGVIFILAVFINNPVAALYAIASGVLSAYISLQFSEPQTDIHMGLFSFNAVLCAITFSGTRVRDGIY VLFSILVSTLFDIYMVKMGWAPLTFPFVASSWITLLLKKSVPAKYR >Mature_286_residues MKSKISLYSKTILTSIGQIMLQENPWTGLLFLAGIFYGSVVMGIAAILSAVTALITALLLKFDKNETEQGLYGFSATLVG VALTFFFKPEPVIWIAIIAGSSLAAILQHVFIKRKIPVFTLPFIIITWIGLYIFHNVFIIGGPVSGSELLNDQNELATVA HGFGEVIFQGSILAGVIFILAVFINNPVAALYAIASGVLSAYISLQFSEPQTDIHMGLFSFNAVLCAITFSGTRVRDGIY VLFSILVSTLFDIYMVKMGWAPLTFPFVASSWITLLLKKSVPAKYR
Specific function: Unknown
COG id: COG4413
COG function: function code E; Urea transporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI157694503, Length=312, Percent_Identity=26.6025641025641, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI226371772, Length=302, Percent_Identity=26.4900662251656, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI226371768, Length=302, Percent_Identity=26.4900662251656, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI225690519, Length=302, Percent_Identity=26.4900662251656, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI289802991, Length=302, Percent_Identity=26.158940397351, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31192; Mature: 31192
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKISLYSKTILTSIGQIMLQENPWTGLLFLAGIFYGSVVMGIAAILSAVTALITALLL CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFDKNETEQGLYGFSATLVGVALTFFFKPEPVIWIAIIAGSSLAAILQHVFIKRKIPVFT HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHH LPFIIITWIGLYIFHNVFIIGGPVSGSELLNDQNELATVAHGFGEVIFQGSILAGVIFIL HHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH AVFINNPVAALYAIASGVLSAYISLQFSEPQTDIHMGLFSFNAVLCAITFSGTRVRDGIY HHHHCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHEEEECCCCHHHHHH VLFSILVSTLFDIYMVKMGWAPLTFPFVASSWITLLLKKSVPAKYR HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKSKISLYSKTILTSIGQIMLQENPWTGLLFLAGIFYGSVVMGIAAILSAVTALITALLL CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFDKNETEQGLYGFSATLVGVALTFFFKPEPVIWIAIIAGSSLAAILQHVFIKRKIPVFT HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHH LPFIIITWIGLYIFHNVFIIGGPVSGSELLNDQNELATVAHGFGEVIFQGSILAGVIFIL HHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH AVFINNPVAALYAIASGVLSAYISLQFSEPQTDIHMGLFSFNAVLCAITFSGTRVRDGIY HHHHCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHEEEECCCCHHHHHH VLFSILVSTLFDIYMVKMGWAPLTFPFVASSWITLLLKKSVPAKYR HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA