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The map label for this gene is chbR [C]

Identifier: 146302553

GI number: 146302553

Start: 5843235

End: 5844125

Strand: Direct

Name: chbR [C]

Synonym: Fjoh_4826

Alternate gene names: 146302553

Gene position: 5843235-5844125 (Clockwise)

Preceding gene: 146302552

Following gene: 146302566

Centisome position: 95.84

GC content: 32.66

Gene sequence:

>891_bases
ATGGAAAAACCTATTCAAATTCTTAGTGCTTATGAGTACAAGTTACAGTTTTTGCCATGTATAAACAGTGTTACTTTACA
AGATAAATCGCAGCTTCAATTGTATAAAATAGAAGAGTATCTTAAACAAATTGTAATACCGGTTGCTCCTTACAGAACCT
CTTTTAATTTTTTATTATTTGTTTCTGAAGGTTATGTAAAACAGCAGTTAGAATCAGAAAATCACTTAATAGGTCCTGGA
CAAATATTAAACATTAAACAAGGCAGTATTACGAGAAGTCATGAATTGTCTCCCGATGTAAAAGGTTTTTATCTGATTTA
TGAAAATGATATTTTATCCTCTATTTCTTTAAGCAGGCAGGACCAAATTTTTCTTACTTCAGATCCTGTTATTCTGCTTC
AGGAGAGTGCTTACAACTGCATGGTCAAGACTTTTGAACTTCTGGATGCGGAACTTCATACAGATTACGTACAGGAGGAA
ATATGCCTGACTTTTTTTAAGGCAATTATGCTTAAAATCAGCAGACAAACTTCTCATAAACCATTATTATCTATGGCGAG
AGAACTTTATATCACTTATAAATTTAGAGAGAAACTGCAACAGGAACACAAGGAACATAAAAATGTTATTTTTTATGCCC
AGCAGCTGAATATTTCTGAAACTTATCTAAACAAGTGTATCAAGAAAGCAACAGGAAAACCCCCTAAACAATGGATTAAT
GAAATATGCGTGCAGCACAGTCAAATTCTGCTTCGTGATTTAGGACGCGAAATTGCAGATGTAGCTTATGAACTTAATTT
TCATTCTCTATCTCATTTTTCAAGAGTTTTTAAAAAAGTAACTCATCTCTCTCCATCAGAATTTCGTTTGCAGGTATTAA
ATCAATACTAG

Upstream 100 bases:

>100_bases
TTATAAAACATAAGAACAGCTGTTTAATGACTTCATTTTTGTATTAGTTTTACATTGAAATTTTTCACTAAAAATACAAT
TAATACAGTATAGCCATAAA

Downstream 100 bases:

>100_bases
TTAACATAGATAAAAAAAGGGAATTCGGCTCGATTGGCAGAATTCCCTTTATCTTTTTTTCTAAAAATTTAGATCTTGTA
AGTGAGTCCTATTTTAACCA

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator; AraC Family Transcriptional Regulator; AraC-Type Transcription Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcription Regulator AraC-Type; Transcription Regulator; Phosphomethylpyrimidine Kinase; AraC-Family Transcriptional Regulator; Bacterial Regulatory Helix-Turn-Helix Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MEKPIQILSAYEYKLQFLPCINSVTLQDKSQLQLYKIEEYLKQIVIPVAPYRTSFNFLLFVSEGYVKQQLESENHLIGPG
QILNIKQGSITRSHELSPDVKGFYLIYENDILSSISLSRQDQIFLTSDPVILLQESAYNCMVKTFELLDAELHTDYVQEE
ICLTFFKAIMLKISRQTSHKPLLSMARELYITYKFREKLQQEHKEHKNVIFYAQQLNISETYLNKCIKKATGKPPKQWIN
EICVQHSQILLRDLGREIADVAYELNFHSLSHFSRVFKKVTHLSPSEFRLQVLNQY

Sequences:

>Translated_296_residues
MEKPIQILSAYEYKLQFLPCINSVTLQDKSQLQLYKIEEYLKQIVIPVAPYRTSFNFLLFVSEGYVKQQLESENHLIGPG
QILNIKQGSITRSHELSPDVKGFYLIYENDILSSISLSRQDQIFLTSDPVILLQESAYNCMVKTFELLDAELHTDYVQEE
ICLTFFKAIMLKISRQTSHKPLLSMARELYITYKFREKLQQEHKEHKNVIFYAQQLNISETYLNKCIKKATGKPPKQWIN
EICVQHSQILLRDLGREIADVAYELNFHSLSHFSRVFKKVTHLSPSEFRLQVLNQY
>Mature_296_residues
MEKPIQILSAYEYKLQFLPCINSVTLQDKSQLQLYKIEEYLKQIVIPVAPYRTSFNFLLFVSEGYVKQQLESENHLIGPG
QILNIKQGSITRSHELSPDVKGFYLIYENDILSSISLSRQDQIFLTSDPVILLQESAYNCMVKTFELLDAELHTDYVQEE
ICLTFFKAIMLKISRQTSHKPLLSMARELYITYKFREKLQQEHKEHKNVIFYAQQLNISETYLNKCIKKATGKPPKQWIN
EICVQHSQILLRDLGREIADVAYELNFHSLSHFSRVFKKVTHLSPSEFRLQVLNQY

Specific function: Repressor For The Chbbcarfg Operon (Probable). [C]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34693; Mature: 34693

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKPIQILSAYEYKLQFLPCINSVTLQDKSQLQLYKIEEYLKQIVIPVAPYRTSFNFLLF
CCCHHHHHHHHHHHHEEECCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
VSEGYVKQQLESENHLIGPGQILNIKQGSITRSHELSPDVKGFYLIYENDILSSISLSRQ
EECCHHHHHHCCCCCEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCHHHHHHCCCC
DQIFLTSDPVILLQESAYNCMVKTFELLDAELHTDYVQEEICLTFFKAIMLKISRQTSHK
CEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLLSMARELYITYKFREKLQQEHKEHKNVIFYAQQLNISETYLNKCIKKATGKPPKQWIN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHH
EICVQHSQILLRDLGREIADVAYELNFHSLSHFSRVFKKVTHLSPSEFRLQVLNQY
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MEKPIQILSAYEYKLQFLPCINSVTLQDKSQLQLYKIEEYLKQIVIPVAPYRTSFNFLLF
CCCHHHHHHHHHHHHEEECCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
VSEGYVKQQLESENHLIGPGQILNIKQGSITRSHELSPDVKGFYLIYENDILSSISLSRQ
EECCHHHHHHCCCCCEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCHHHHHHCCCC
DQIFLTSDPVILLQESAYNCMVKTFELLDAELHTDYVQEEICLTFFKAIMLKISRQTSHK
CEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLLSMARELYITYKFREKLQQEHKEHKNVIFYAQQLNISETYLNKCIKKATGKPPKQWIN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHH
EICVQHSQILLRDLGREIADVAYELNFHSLSHFSRVFKKVTHLSPSEFRLQVLNQY
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA