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The map label for this gene is ybbC [H]

Identifier: 146302533

GI number: 146302533

Start: 5809230

End: 5810369

Strand: Reverse

Name: ybbC [H]

Synonym: Fjoh_4806

Alternate gene names: 146302533

Gene position: 5810369-5809230 (Counterclockwise)

Preceding gene: 146302534

Following gene: 146302532

Centisome position: 95.3

GC content: 37.19

Gene sequence:

>1140_bases
ATGAGAAATTTAATAATCTGCATACTAATTTCAACAGTATCTTTTGCGCAGAAAATAAAAACGGGTGTTGATAACTACAC
CGTTTATCTGCCTTTGCTAAAAGGCAAAAGCGTAGGCATTGTAACAAACCAAACCGGAATTATGGAAGATAAAACCCATC
TGGTTGATTTTTTGGTTCAGAAAAATATTAAGATCAAAACCATTTTTGCTCCTGAACATGGCTTTAGAGGTACTGCCGAT
GCAGGAGAACACGTTTCTGACGAAATCGATGCTAAAACAGGTTTGTCAATTACTTCACTTTATGGCAAAAACAATAAACC
AACTCCTGAACAATTAAAAGATATTGATGTCATGGTTTTTGATTTACAGGATGTTGGGACAAGATTATATACTTACGTTT
CTACGATGCACAGAATTATGGAAGCCTGCGCAGAGAATAATGTTCCGCTGATTGTACTGGACCGTCCAAATCCGAATATT
GCGATTGTCGACGGTCCGGTTTTGGACATTGCTTTTCAAAGCGGTATTGGGATGCATCCAACGCCTCTGCTTCACGGTAT
GACTTTGGGCGAAGAAGCAAAAATGATTAACGGACAAAAATGGCTGAAAAATGGTATGCAGTGTAAACTTACTGTTGTTC
CGTGTTTGAATTATGACAGAAATATGAGCTACAGCCTTCCAGTTCGTCCTTCGCCAAATTTGCCAAACGACCAATCGGTA
AATTTATATGTGAGTTTATGTCTTTTTGAAGGAACGAATGTAAGTATGGGACGCGGCACTGAAAAACAATTTCAGATTTA
CGGTTCGCCTTATCTGCCAAAAAGTGATTTTACTTTTACTCCAAAACCTAATTTTGGCGATAAAGATCCTTTGTATAATG
GCGTAGAATGTAATGGAGAAGATTTGTCATCCATTCCGAGAATTAGCAGACTTGAAATAAAATGGCTGATTAAAGCCTAT
CAAACTACTTCGGATAAATCGAAATTTTTCGACAAAAGAAAGTTTTCTATCAGAGCCGGAAATGAAAAATTACAGCAGCA
AATTGAAGCCGGAACATCTGAAGAAGAAATTAGAAAAAGCTGGCAGGAAGGTTTGAAAGACTTTAAGAAAATGAGAGCGC
CTTATTTAATCTATCATTAA

Upstream 100 bases:

>100_bases
TAAAATTAAATCTGCCATAATCTACGTGAAAAACTGAGCGTTAACCAAATAAAAAAAACTTTTTAATCTACTTAATCTGT
GGCAAATAAAAATAATAACT

Downstream 100 bases:

>100_bases
AAGAATGCTCTGGAAGAGCAAAATATTTATAGCATAATTATTTCTCCATACATAGAGCTCCAGCGGAGCGACATAATTGA
TGAATATATATCGCTCCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MRNLIICILISTVSFAQKIKTGVDNYTVYLPLLKGKSVGIVTNQTGIMEDKTHLVDFLVQKNIKIKTIFAPEHGFRGTAD
AGEHVSDEIDAKTGLSITSLYGKNNKPTPEQLKDIDVMVFDLQDVGTRLYTYVSTMHRIMEACAENNVPLIVLDRPNPNI
AIVDGPVLDIAFQSGIGMHPTPLLHGMTLGEEAKMINGQKWLKNGMQCKLTVVPCLNYDRNMSYSLPVRPSPNLPNDQSV
NLYVSLCLFEGTNVSMGRGTEKQFQIYGSPYLPKSDFTFTPKPNFGDKDPLYNGVECNGEDLSSIPRISRLEIKWLIKAY
QTTSDKSKFFDKRKFSIRAGNEKLQQQIEAGTSEEEIRKSWQEGLKDFKKMRAPYLIYH

Sequences:

>Translated_379_residues
MRNLIICILISTVSFAQKIKTGVDNYTVYLPLLKGKSVGIVTNQTGIMEDKTHLVDFLVQKNIKIKTIFAPEHGFRGTAD
AGEHVSDEIDAKTGLSITSLYGKNNKPTPEQLKDIDVMVFDLQDVGTRLYTYVSTMHRIMEACAENNVPLIVLDRPNPNI
AIVDGPVLDIAFQSGIGMHPTPLLHGMTLGEEAKMINGQKWLKNGMQCKLTVVPCLNYDRNMSYSLPVRPSPNLPNDQSV
NLYVSLCLFEGTNVSMGRGTEKQFQIYGSPYLPKSDFTFTPKPNFGDKDPLYNGVECNGEDLSSIPRISRLEIKWLIKAY
QTTSDKSKFFDKRKFSIRAGNEKLQQQIEAGTSEEEIRKSWQEGLKDFKKMRAPYLIYH
>Mature_379_residues
MRNLIICILISTVSFAQKIKTGVDNYTVYLPLLKGKSVGIVTNQTGIMEDKTHLVDFLVQKNIKIKTIFAPEHGFRGTAD
AGEHVSDEIDAKTGLSITSLYGKNNKPTPEQLKDIDVMVFDLQDVGTRLYTYVSTMHRIMEACAENNVPLIVLDRPNPNI
AIVDGPVLDIAFQSGIGMHPTPLLHGMTLGEEAKMINGQKWLKNGMQCKLTVVPCLNYDRNMSYSLPVRPSPNLPNDQSV
NLYVSLCLFEGTNVSMGRGTEKQFQIYGSPYLPKSDFTFTPKPNFGDKDPLYNGVECNGEDLSSIPRISRLEIKWLIKAY
QTTSDKSKFFDKRKFSIRAGNEKLQQQIEAGTSEEEIRKSWQEGLKDFKKMRAPYLIYH

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 42655; Mature: 42655

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLIICILISTVSFAQKIKTGVDNYTVYLPLLKGKSVGIVTNQTGIMEDKTHLVDFLVQ
CCCEEEEEEHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHH
KNIKIKTIFAPEHGFRGTADAGEHVSDEIDAKTGLSITSLYGKNNKPTPEQLKDIDVMVF
CCCEEEEEECCCCCCCCCCCCCCCHHHHCCHHCCCEEEEEECCCCCCCHHHHCCCEEEEE
DLQDVGTRLYTYVSTMHRIMEACAENNVPLIVLDRPNPNIAIVDGPVLDIAFQSGIGMHP
EHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCEEEEEECCCCCCCC
TPLLHGMTLGEEAKMINGQKWLKNGMQCKLTVVPCLNYDRNMSYSLPVRPSPNLPNDQSV
CHHHHCCCCCCHHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCE
NLYVSLCLFEGTNVSMGRGTEKQFQIYGSPYLPKSDFTFTPKPNFGDKDPLYNGVECNGE
EEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
DLSSIPRISRLEIKWLIKAYQTTSDKSKFFDKRKFSIRAGNEKLQQQIEAGTSEEEIRKS
CHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHEEEEECCCHHHHHHHHCCCCHHHHHHH
WQEGLKDFKKMRAPYLIYH
HHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure
MRNLIICILISTVSFAQKIKTGVDNYTVYLPLLKGKSVGIVTNQTGIMEDKTHLVDFLVQ
CCCEEEEEEHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHH
KNIKIKTIFAPEHGFRGTADAGEHVSDEIDAKTGLSITSLYGKNNKPTPEQLKDIDVMVF
CCCEEEEEECCCCCCCCCCCCCCCHHHHCCHHCCCEEEEEECCCCCCCHHHHCCCEEEEE
DLQDVGTRLYTYVSTMHRIMEACAENNVPLIVLDRPNPNIAIVDGPVLDIAFQSGIGMHP
EHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCEEEEEECCCCCCCC
TPLLHGMTLGEEAKMINGQKWLKNGMQCKLTVVPCLNYDRNMSYSLPVRPSPNLPNDQSV
CHHHHCCCCCCHHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCE
NLYVSLCLFEGTNVSMGRGTEKQFQIYGSPYLPKSDFTFTPKPNFGDKDPLYNGVECNGE
EEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
DLSSIPRISRLEIKWLIKAYQTTSDKSKFFDKRKFSIRAGNEKLQQQIEAGTSEEEIRKS
CHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHEEEEECCCHHHHHHHHCCCCHHHHHHH
WQEGLKDFKKMRAPYLIYH
HHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]