| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302530
Identifier: 146302530
GI number: 146302530
Start: 5804640
End: 5805671
Strand: Direct
Name: 146302530
Synonym: Fjoh_4803
Alternate gene names: NA
Gene position: 5804640-5805671 (Clockwise)
Preceding gene: 146302529
Following gene: 146302541
Centisome position: 95.21
GC content: 33.91
Gene sequence:
>1032_bases ATGGAACTAAACAATATAATCAAGATGAACAAACTGCCATTTTTACTATTATTGCTTTGTCTTTTTACAAGCTGCAGTAA AGACAACGACATAGAAGCTATAAACTATGATTACTACTATCCTACCGAAAGCGCCGAAATTACTGCTAAACAAATTGGCG ACGGTACAGGAACATTAGATCCAAAAGGAATCGCAATCTCTAAAGAAAAACTGTATGTATGCAACGGCAGTACTTTAGAA GTATTTGATGCTTTAACACTGGCACATTTAAAAACAATTTCCAATTATACCAAAGGAAGCACCATTATACCATTGACTTT ATTAACATCGATAAGTATTGATAACGGCCGAATTTATTTAGGAAGCGAAGAATCAAGACTTTTTGTTTTGGATGAAACTA CCGGTTTAGGAATCAACACAGTTGGAAACGGACAATGGTGGCAGACTTTTGTTCATGTTTTTGGTGTTGTGGTAAAAGAC GGATTGGTGTTTGTAAAAGAAAAAGAAAAAAGCATCAAAGTGTTTGAAACTTCTCAAATTACCGAAACAAGTAATTGGAA CTTAACCCCAATCGCCAAACTTAATACCTTAAACGGATGGACAGAAGCTTACTCTATGGATGTGCAATCTGGAAATCTAA TTGTTGCAGGAAGAGATGCTAAAAGTTATTTGTACTATGATATTGCCAATATTAAAGCAAATGCCGCAAACTCTTTAACA ACTCCAATCGAACCTTCAACAGCTCCGTTTGCCAACAACAAACCTATTTCTGTAACTTTTAGTAATGATTTTGCTGTAAC TTCAGAAAATTCAGGAAACACAAATTATGTGCGTTTGTATTCAAAAGAAGCTTTTATGAATAAAAATTATAAAGCTGTAA TGAGTGCATCTGATATTTTAGGACAGAATCCTTTTGGGGTTATTGTAGGCAATGCTCAACTGGACGATCGTATTTTCTTA TCAGATAATACCAATAAGAAAATCAGAATCATCAAACTCAATAAATCTACAATTGCTGAACAGAAAAACTAA
Upstream 100 bases:
>100_bases GATATACAAAAACAAGCTATCTGTCTGGAAGTTACAAAAAACCTGTGTTTACAATTAGTCAAAAAAATCCATTTTTATTA AAATATAAAGGAGAAGGAAA
Downstream 100 bases:
>100_bases TCAATTTTAGAAATTCTGGATTTATAAAAAACAAAAGGGAAGACATAAAAATCTTCCCTTTCTTTATTTACAGCATTCTG AAAATAGTTTTTATATGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MELNNIIKMNKLPFLLLLLCLFTSCSKDNDIEAINYDYYYPTESAEITAKQIGDGTGTLDPKGIAISKEKLYVCNGSTLE VFDALTLAHLKTISNYTKGSTIIPLTLLTSISIDNGRIYLGSEESRLFVLDETTGLGINTVGNGQWWQTFVHVFGVVVKD GLVFVKEKEKSIKVFETSQITETSNWNLTPIAKLNTLNGWTEAYSMDVQSGNLIVAGRDAKSYLYYDIANIKANAANSLT TPIEPSTAPFANNKPISVTFSNDFAVTSENSGNTNYVRLYSKEAFMNKNYKAVMSASDILGQNPFGVIVGNAQLDDRIFL SDNTNKKIRIIKLNKSTIAEQKN
Sequences:
>Translated_343_residues MELNNIIKMNKLPFLLLLLCLFTSCSKDNDIEAINYDYYYPTESAEITAKQIGDGTGTLDPKGIAISKEKLYVCNGSTLE VFDALTLAHLKTISNYTKGSTIIPLTLLTSISIDNGRIYLGSEESRLFVLDETTGLGINTVGNGQWWQTFVHVFGVVVKD GLVFVKEKEKSIKVFETSQITETSNWNLTPIAKLNTLNGWTEAYSMDVQSGNLIVAGRDAKSYLYYDIANIKANAANSLT TPIEPSTAPFANNKPISVTFSNDFAVTSENSGNTNYVRLYSKEAFMNKNYKAVMSASDILGQNPFGVIVGNAQLDDRIFL SDNTNKKIRIIKLNKSTIAEQKN >Mature_343_residues MELNNIIKMNKLPFLLLLLCLFTSCSKDNDIEAINYDYYYPTESAEITAKQIGDGTGTLDPKGIAISKEKLYVCNGSTLE VFDALTLAHLKTISNYTKGSTIIPLTLLTSISIDNGRIYLGSEESRLFVLDETTGLGINTVGNGQWWQTFVHVFGVVVKD GLVFVKEKEKSIKVFETSQITETSNWNLTPIAKLNTLNGWTEAYSMDVQSGNLIVAGRDAKSYLYYDIANIKANAANSLT TPIEPSTAPFANNKPISVTFSNDFAVTSENSGNTNYVRLYSKEAFMNKNYKAVMSASDILGQNPFGVIVGNAQLDDRIFL SDNTNKKIRIIKLNKSTIAEQKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37890; Mature: 37890
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELNNIIKMNKLPFLLLLLCLFTSCSKDNDIEAINYDYYYPTESAEITAKQIGDGTGTLD CCCHHEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEHHHCCCCCCCCC PKGIAISKEKLYVCNGSTLEVFDALTLAHLKTISNYTKGSTIIPLTLLTSISIDNGRIYL CCCEEEECCEEEEECCCEEHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCEEEE GSEESRLFVLDETTGLGINTVGNGQWWQTFVHVFGVVVKDGLVFVKEKEKSIKVFETSQI CCCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCE TETSNWNLTPIAKLNTLNGWTEAYSMDVQSGNLIVAGRDAKSYLYYDIANIKANAANSLT EECCCCCEEEEEEEECCCCCCCEEEEEECCCCEEEEECCCCEEEEEEEECEEECCCCCCC TPIEPSTAPFANNKPISVTFSNDFAVTSENSGNTNYVRLYSKEAFMNKNYKAVMSASDIL CCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCEEEEEECHHHHCCCCCEEEEHHHHH GQNPFGVIVGNAQLDDRIFLSDNTNKKIRIIKLNKSTIAEQKN CCCCCEEEEECCEECCEEEEECCCCCEEEEEEECCHHHCCCCC >Mature Secondary Structure MELNNIIKMNKLPFLLLLLCLFTSCSKDNDIEAINYDYYYPTESAEITAKQIGDGTGTLD CCCHHEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEHHHCCCCCCCCC PKGIAISKEKLYVCNGSTLEVFDALTLAHLKTISNYTKGSTIIPLTLLTSISIDNGRIYL CCCEEEECCEEEEECCCEEHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCEEEE GSEESRLFVLDETTGLGINTVGNGQWWQTFVHVFGVVVKDGLVFVKEKEKSIKVFETSQI CCCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCE TETSNWNLTPIAKLNTLNGWTEAYSMDVQSGNLIVAGRDAKSYLYYDIANIKANAANSLT EECCCCCEEEEEEEECCCCCCCEEEEEECCCCEEEEECCCCEEEEEEEECEEECCCCCCC TPIEPSTAPFANNKPISVTFSNDFAVTSENSGNTNYVRLYSKEAFMNKNYKAVMSASDIL CCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCEEEEEECHHHHCCCCCEEEEHHHHH GQNPFGVIVGNAQLDDRIFLSDNTNKKIRIIKLNKSTIAEQKN CCCCCEEEEECCEECCEEEEECCCCCEEEEEEECCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA