| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146302529
Identifier: 146302529
GI number: 146302529
Start: 5803426
End: 5804649
Strand: Direct
Name: 146302529
Synonym: Fjoh_4802
Alternate gene names: NA
Gene position: 5803426-5804649 (Clockwise)
Preceding gene: 146302528
Following gene: 146302530
Centisome position: 95.19
GC content: 37.75
Gene sequence:
>1224_bases ATGAAAAAAAACTTTTATTATTTTTTACTTACGCTCTCGGCAGGTATTCTATTAAGCTCCTGCAGCGACGACAATGAAGA CGGCAAATACAAACCTACTTATCTGCCTTCTATCGACGCAAGTGCCTTACCAGACGGAAACAAACCTATGACGATGTTTG AAGATGACGAAAATTCATCTAAAATGTACGACAATAAAGACCGTTGGTTTCGTGTCAATCAGCCTATGCAGGTAATTCAA AAAGGAAAAGATTCTGTACAGATTTCTCTTTATTCGCCTGTTGGCTTAACCGACGTAAAAGTCTACGCAAAACTGCCGAA TTATGACAAACGATTTGTACTTTTTCATTTTTCTAAAGTTCCGGCTTTTCACAGATCTTTTCATAAAATTCCGTTGACGG AAGGCAAAAATGATTATGAACTCGAAAAAGGAAATACGGTAACTATCGATAAAATCGAAGGGTTTTCATCTGGAGCAATC GAGTTTTCTGTTGAATCGAGCGATCCTTTATTCCAGAAATTCAAAAAAATAAAATCGGCTAGATTGGTTCAGTTCAGCGA TCAATATCACAAAAACGAATATGGAAAATACCTGCCAATGAATCCTGTTCTGGCAAAAGAAGCGATAACGATGATTATCA ATTTCTCGTATGCAATCAGTCATCCTATGTATTACGATACTTTCATGAATTTTGACCGATACAAAAAAGAACAGGCAGAA ACTGCAGGTACAGCAATAAACGGTGCTTTAAACTGGCACGGAAATGCCGATGATGCTGACGGCGTTTATGATTATTTAAC TAAAGTTCAAATTGAACAGGCATACGGAACTTACATTGACAGCCGAACTCTGAATATGGCAATGGTGGGTGGAGATTCTG CCTGGGGAGGCGGACCTTTGGCTTCACAATGGGAATCTGGTTATGTAACCGGACACTGGGTTGGCGAAATGTCGGTTTGG TCACACGAATACTCACATCACAGCGGTTATAACCACAGCAGTAATTTAGCAAACAGCGGCGAAGGCGGCGGACAGCAGGA AATGCTTACTGATTTTTATAAGTATTTAATTTATTTAAATGATCTTCCGTTTACAGATCCTGATATTTTAAAAGGATATA CAAAAACAAGCTATCTGTCTGGAAGTTACAAAAAACCTGTGTTTACAATTAGTCAAAAAAATCCATTTTTATTAAAATAT AAAGGAGAAGGAAAATGGAACTAA
Upstream 100 bases:
>100_bases TTATTTTTGCCAACCTATCTTATTATAAAACTTTAAAATTTAATTAAAAAGAATGCGTTAAAAAAATTAAGTAACAAACC CCAAATCAAAACAAAACCAC
Downstream 100 bases:
>100_bases ACAATATAATCAAGATGAACAAACTGCCATTTTTACTATTATTGCTTTGTCTTTTTACAAGCTGCAGTAAAGACAACGAC ATAGAAGCTATAAACTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MKKNFYYFLLTLSAGILLSSCSDDNEDGKYKPTYLPSIDASALPDGNKPMTMFEDDENSSKMYDNKDRWFRVNQPMQVIQ KGKDSVQISLYSPVGLTDVKVYAKLPNYDKRFVLFHFSKVPAFHRSFHKIPLTEGKNDYELEKGNTVTIDKIEGFSSGAI EFSVESSDPLFQKFKKIKSARLVQFSDQYHKNEYGKYLPMNPVLAKEAITMIINFSYAISHPMYYDTFMNFDRYKKEQAE TAGTAINGALNWHGNADDADGVYDYLTKVQIEQAYGTYIDSRTLNMAMVGGDSAWGGGPLASQWESGYVTGHWVGEMSVW SHEYSHHSGYNHSSNLANSGEGGGQQEMLTDFYKYLIYLNDLPFTDPDILKGYTKTSYLSGSYKKPVFTISQKNPFLLKY KGEGKWN
Sequences:
>Translated_407_residues MKKNFYYFLLTLSAGILLSSCSDDNEDGKYKPTYLPSIDASALPDGNKPMTMFEDDENSSKMYDNKDRWFRVNQPMQVIQ KGKDSVQISLYSPVGLTDVKVYAKLPNYDKRFVLFHFSKVPAFHRSFHKIPLTEGKNDYELEKGNTVTIDKIEGFSSGAI EFSVESSDPLFQKFKKIKSARLVQFSDQYHKNEYGKYLPMNPVLAKEAITMIINFSYAISHPMYYDTFMNFDRYKKEQAE TAGTAINGALNWHGNADDADGVYDYLTKVQIEQAYGTYIDSRTLNMAMVGGDSAWGGGPLASQWESGYVTGHWVGEMSVW SHEYSHHSGYNHSSNLANSGEGGGQQEMLTDFYKYLIYLNDLPFTDPDILKGYTKTSYLSGSYKKPVFTISQKNPFLLKY KGEGKWN >Mature_407_residues MKKNFYYFLLTLSAGILLSSCSDDNEDGKYKPTYLPSIDASALPDGNKPMTMFEDDENSSKMYDNKDRWFRVNQPMQVIQ KGKDSVQISLYSPVGLTDVKVYAKLPNYDKRFVLFHFSKVPAFHRSFHKIPLTEGKNDYELEKGNTVTIDKIEGFSSGAI EFSVESSDPLFQKFKKIKSARLVQFSDQYHKNEYGKYLPMNPVLAKEAITMIINFSYAISHPMYYDTFMNFDRYKKEQAE TAGTAINGALNWHGNADDADGVYDYLTKVQIEQAYGTYIDSRTLNMAMVGGDSAWGGGPLASQWESGYVTGHWVGEMSVW SHEYSHHSGYNHSSNLANSGEGGGQQEMLTDFYKYLIYLNDLPFTDPDILKGYTKTSYLSGSYKKPVFTISQKNPFLLKY KGEGKWN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46294; Mature: 46294
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNFYYFLLTLSAGILLSSCSDDNEDGKYKPTYLPSIDASALPDGNKPMTMFEDDENSS CCCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC KMYDNKDRWFRVNQPMQVIQKGKDSVQISLYSPVGLTDVKVYAKLPNYDKRFVLFHFSKV CCCCCCCCEEEECCCHHHHHCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCC PAFHRSFHKIPLTEGKNDYELEKGNTVTIDKIEGFSSGAIEFSVESSDPLFQKFKKIKSA CHHHHHHCCCCCCCCCCCEEECCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHH RLVQFSDQYHKNEYGKYLPMNPVLAKEAITMIINFSYAISHPMYYDTFMNFDRYKKEQAE HEEEEHHHHHHCCCCCCCCCCCHHHHHHEEEEEEEHHHHCCCCHHHHHHCHHHHHHHHHH TAGTAINGALNWHGNADDADGVYDYLTKVQIEQAYGTYIDSRTLNMAMVGGDSAWGGGPL HCCCEEECEEECCCCCCCCCHHHHHHHHEEEEHHHCCEECCCEEEEEEECCCCCCCCCCC ASQWESGYVTGHWVGEMSVWSHEYSHHSGYNHSSNLANSGEGGGQQEMLTDFYKYLIYLN CCCCCCCCEEEEEECCCHHHHCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEC DLPFTDPDILKGYTKTSYLSGSYKKPVFTISQKNPFLLKYKGEGKWN CCCCCCHHHHCCCCHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCC >Mature Secondary Structure MKKNFYYFLLTLSAGILLSSCSDDNEDGKYKPTYLPSIDASALPDGNKPMTMFEDDENSS CCCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC KMYDNKDRWFRVNQPMQVIQKGKDSVQISLYSPVGLTDVKVYAKLPNYDKRFVLFHFSKV CCCCCCCCEEEECCCHHHHHCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCC PAFHRSFHKIPLTEGKNDYELEKGNTVTIDKIEGFSSGAIEFSVESSDPLFQKFKKIKSA CHHHHHHCCCCCCCCCCCEEECCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHH RLVQFSDQYHKNEYGKYLPMNPVLAKEAITMIINFSYAISHPMYYDTFMNFDRYKKEQAE HEEEEHHHHHHCCCCCCCCCCCHHHHHHEEEEEEEHHHHCCCCHHHHHHCHHHHHHHHHH TAGTAINGALNWHGNADDADGVYDYLTKVQIEQAYGTYIDSRTLNMAMVGGDSAWGGGPL HCCCEEECEEECCCCCCCCCHHHHHHHHEEEEHHHCCEECCCEEEEEEECCCCCCCCCCC ASQWESGYVTGHWVGEMSVWSHEYSHHSGYNHSSNLANSGEGGGQQEMLTDFYKYLIYLN CCCCCCCCEEEEEECCCHHHHCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEC DLPFTDPDILKGYTKTSYLSGSYKKPVFTISQKNPFLLKYKGEGKWN CCCCCCHHHHCCCCHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA