| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is pgl [H]
Identifier: 146302528
GI number: 146302528
Start: 5802379
End: 5803095
Strand: Direct
Name: pgl [H]
Synonym: Fjoh_4801
Alternate gene names: 146302528
Gene position: 5802379-5803095 (Clockwise)
Preceding gene: 146302527
Following gene: 146302529
Centisome position: 95.17
GC content: 37.66
Gene sequence:
>717_bases ATGATACAGATATATAATACTACAGAAGAAATTAATACTGCAGCGGCAGACCTTTTTACAGCAGCAGCACAAGATGCAAT TGCAAAAAGAGGAAAATTTACAGCAGTTCTTACTGGAGGTTCTTCTCCTTCAGGAATTTACAAACTGCTGGCTTCTGATG CATACAAAAACAAAATAGACTGGAGTAAAGTCTACATATTCTGGGGCGACGAACGCTGGGTGCCGCTAAATGATGATTTG AGCAACGCAAAAATGTCTTATGCAGCATTATTAAGCCACGTTCCTATTCCGTCTGAAAATATTTTTGAAATGTACAAAGA CGGTGTAACACCAGAAGATTACGCAGTTACATACGAACAATCAATTCGAAAAATTTTAGGAGAAGAAGGAAAATTTGACT TTATCTTTTTAGGAATGGGAGATGACGGACACACGGCTTCTCTTTTTCCAGGTGAAGCAGTATTAAATGAACAAAACAAG TGGGTTGATGCCTATTTTCTGGCACCGCAGAACATGCACCGCATTACACTTACTGCTCCATTAATTAATAAAGCCGAAAA GATTATTGTAGTCACTTTTGGAGAGAAAAAAGCACATGCTTTAAAAGAAGTAACAAAAGGAGAATACAATCCTTCACTTT ACCCTACGCAGCTAATTAAACCTGTCTCTGGAGAATTAGTATTTCTCGTAGATAAAAGTGCTGCAGGAACCAATTAA
Upstream 100 bases:
>100_bases TACAAAGCCGGAAGCTGGGGACCAGAAGAAGCTGATGAACTATTGGCACGCCAGGGACACAAATGGATTCCAAATACACA AACAAAAGAAGAACTTTTAG
Downstream 100 bases:
>100_bases AACACCAGAAAGTCCGAAAATGTTTTTCGGACTTTTTTTATGCTTTATCTTCATCCTTTATTTTCGTATTTCATCAAATC TGGAGTTATCTGCTAATCGT
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MIQIYNTTEEINTAAADLFTAAAQDAIAKRGKFTAVLTGGSSPSGIYKLLASDAYKNKIDWSKVYIFWGDERWVPLNDDL SNAKMSYAALLSHVPIPSENIFEMYKDGVTPEDYAVTYEQSIRKILGEEGKFDFIFLGMGDDGHTASLFPGEAVLNEQNK WVDAYFLAPQNMHRITLTAPLINKAEKIIVVTFGEKKAHALKEVTKGEYNPSLYPTQLIKPVSGELVFLVDKSAAGTN
Sequences:
>Translated_238_residues MIQIYNTTEEINTAAADLFTAAAQDAIAKRGKFTAVLTGGSSPSGIYKLLASDAYKNKIDWSKVYIFWGDERWVPLNDDL SNAKMSYAALLSHVPIPSENIFEMYKDGVTPEDYAVTYEQSIRKILGEEGKFDFIFLGMGDDGHTASLFPGEAVLNEQNK WVDAYFLAPQNMHRITLTAPLINKAEKIIVVTFGEKKAHALKEVTKGEYNPSLYPTQLIKPVSGELVFLVDKSAAGTN >Mature_238_residues MIQIYNTTEEINTAAADLFTAAAQDAIAKRGKFTAVLTGGSSPSGIYKLLASDAYKNKIDWSKVYIFWGDERWVPLNDDL SNAKMSYAALLSHVPIPSENIFEMYKDGVTPEDYAVTYEQSIRKILGEEGKFDFIFLGMGDDGHTASLFPGEAVLNEQNK WVDAYFLAPQNMHRITLTAPLINKAEKIIVVTFGEKKAHALKEVTKGEYNPSLYPTQLIKPVSGELVFLVDKSAAGTN
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=232, Percent_Identity=34.4827586206897, Blast_Score=120, Evalue=7e-28, Organism=Homo sapiens, GI6912586, Length=241, Percent_Identity=31.9502074688797, Blast_Score=111, Evalue=6e-25, Organism=Caenorhabditis elegans, GI115533058, Length=220, Percent_Identity=30, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI115533060, Length=220, Percent_Identity=30, Blast_Score=87, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6321957, Length=219, Percent_Identity=32.4200913242009, Blast_Score=97, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6321687, Length=225, Percent_Identity=28.8888888888889, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324362, Length=216, Percent_Identity=28.7037037037037, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6319918, Length=215, Percent_Identity=27.4418604651163, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641119, Length=231, Percent_Identity=33.7662337662338, Blast_Score=107, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 26325; Mature: 26325
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQIYNTTEEINTAAADLFTAAAQDAIAKRGKFTAVLTGGSSPSGIYKLLASDAYKNKID CEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCC WSKVYIFWGDERWVPLNDDLSNAKMSYAALLSHVPIPSENIFEMYKDGVTPEDYAVTYEQ EEEEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEHHH SIRKILGEEGKFDFIFLGMGDDGHTASLFPGEAVLNEQNKWVDAYFLAPQNMHRITLTAP HHHHHHCCCCCEEEEEEEECCCCCEEEECCCHHHCCCCCCEEEEEEECCCCCEEEEEEEC LINKAEKIIVVTFGEKKAHALKEVTKGEYNPSLYPTQLIKPVSGELVFLVDKSAAGTN CCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MIQIYNTTEEINTAAADLFTAAAQDAIAKRGKFTAVLTGGSSPSGIYKLLASDAYKNKID CEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCC WSKVYIFWGDERWVPLNDDLSNAKMSYAALLSHVPIPSENIFEMYKDGVTPEDYAVTYEQ EEEEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEHHH SIRKILGEEGKFDFIFLGMGDDGHTASLFPGEAVLNEQNKWVDAYFLAPQNMHRITLTAP HHHHHHCCCCCEEEEEEEECCCCCEEEECCCHHHCCCCCCEEEEEEECCCCCEEEEEEEC LINKAEKIIVVTFGEKKAHALKEVTKGEYNPSLYPTQLIKPVSGELVFLVDKSAAGTN CCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231; 9298645 [H]