Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302521

Identifier: 146302521

GI number: 146302521

Start: 5791934

End: 5793226

Strand: Reverse

Name: 146302521

Synonym: Fjoh_4794

Alternate gene names: NA

Gene position: 5793226-5791934 (Counterclockwise)

Preceding gene: 146302522

Following gene: 146302520

Centisome position: 95.02

GC content: 32.17

Gene sequence:

>1293_bases
ATGGAGCAGGATATTACACTAGAATTAAGAAGTGAAGAAATTCAGGATGTGCTTTCAAAAACACCCATTTGGATGATTCG
ATGGGGGACGATTGTAATATTTTCAATAATCGTTATACTGTTTTATGTGTCATACATTATAAGATATCCGGATGTTGTAA
GTACAGAAATTGTCATTACAACTAATATTCCGCCGGAGAAATTAGTCTCTAAATCATCCGGTCGAATAGAAGCTATACTA
ATAAGCGATAAAGCAACAGTTAAAAAAAATACGATGCTGGCTGTTATTGAAAATTCGGCAAATTATAAAGATGTCTTTTT
ACTCAAAAAGATTATTGCTGATTTTGATATTAATGATACAAAAAAAGAATTTCCTTTTGCCGTAATGAAAAACAAACAAC
TGGGTGAAATTGAAAGTGCTTTTGCTATTTTTCAAAAAGACTATGAAGTTGAAAAACTAAATGAAAATTTACATCCTTTT
GATGTTGAAAATAAAGCACAGGTTTCTGAAAAAACTCAAATTAAAGAAAGGTTAGAAATTTTACAGCAGCAAAAAGAAAT
TAATGAAAGCGAGTTACAGCTTCAAAAAAACGAAATAGGCCGATTTGGAATTCTTTTTAATAAAGGCATTATATCGGCTC
AGGAAATGGAAACTAAAAAGCTCAGCTATCTGCAGGCTCAGAAAAATTACAAAACCTTATTGTCATCGATTTCTCAGTTA
AAATCTTCTTTGATCGATAATACAAAAATGGGGCATAATTTGCAGATAAGCAGCACTAAAGAAGAAGTGAATCTAAACAG
GAACATGGCACAGTCTTTTTATCAGCTGAAAAAAGTGATAAAGGAATGGGAGCTTACGAATACCTTAAGATCTTCGGTTA
GCGGCGTAGTTACTTTTTTGCAGGTTTGGACAGAAAACCAAACGATTAATGAAGGAGATAATGTTTTTTCGATTATTCCG
GATAAAGAAAATGGTTTTGTTGGAAAAGTAAAAGCAACACCTTTAAATTCAGGAAAAATAAAAGTTGGTCAAAACGTAAA
CATAAGACTGGCTAATTTTCCTGATAGAGAATTTGGAGTATTAAGAGGTAAAATTCATAATATTTCGCTGGTTCCGGACA
AAGATGGAAACTTATTATTAGACGTTTCTCTTCCAGATGGTTTACAGACATCTTACAGGAAAAGAATCCCATTTCAGCAG
GAAATGAAAGGAAAAGCAGAAATCCTGACAGAAGACTTAAGATTAATTGAAAGGATTTTATATCAGTTCAAAAGTATTTT
TGAGCAGGTTTAG

Upstream 100 bases:

>100_bases
AGGAAAAATCATCGAAATAGGAAATCATACTACTCTTGTAGAGCAGAGAGGAAATTATTTTGAGTTGGTTAAAAATCAAT
TACAGCTTGGAAATTAAATT

Downstream 100 bases:

>100_bases
TCTTCTGCTTATTTTATATAAAGAGCCTGTAAGCTTAATGTTTACAGGCTTTTTTATGCATTAATGAGATTGTAATTGAG
TTTCTAATTCTAGTCATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MEQDITLELRSEEIQDVLSKTPIWMIRWGTIVIFSIIVILFYVSYIIRYPDVVSTEIVITTNIPPEKLVSKSSGRIEAIL
ISDKATVKKNTMLAVIENSANYKDVFLLKKIIADFDINDTKKEFPFAVMKNKQLGEIESAFAIFQKDYEVEKLNENLHPF
DVENKAQVSEKTQIKERLEILQQQKEINESELQLQKNEIGRFGILFNKGIISAQEMETKKLSYLQAQKNYKTLLSSISQL
KSSLIDNTKMGHNLQISSTKEEVNLNRNMAQSFYQLKKVIKEWELTNTLRSSVSGVVTFLQVWTENQTINEGDNVFSIIP
DKENGFVGKVKATPLNSGKIKVGQNVNIRLANFPDREFGVLRGKIHNISLVPDKDGNLLLDVSLPDGLQTSYRKRIPFQQ
EMKGKAEILTEDLRLIERILYQFKSIFEQV

Sequences:

>Translated_430_residues
MEQDITLELRSEEIQDVLSKTPIWMIRWGTIVIFSIIVILFYVSYIIRYPDVVSTEIVITTNIPPEKLVSKSSGRIEAIL
ISDKATVKKNTMLAVIENSANYKDVFLLKKIIADFDINDTKKEFPFAVMKNKQLGEIESAFAIFQKDYEVEKLNENLHPF
DVENKAQVSEKTQIKERLEILQQQKEINESELQLQKNEIGRFGILFNKGIISAQEMETKKLSYLQAQKNYKTLLSSISQL
KSSLIDNTKMGHNLQISSTKEEVNLNRNMAQSFYQLKKVIKEWELTNTLRSSVSGVVTFLQVWTENQTINEGDNVFSIIP
DKENGFVGKVKATPLNSGKIKVGQNVNIRLANFPDREFGVLRGKIHNISLVPDKDGNLLLDVSLPDGLQTSYRKRIPFQQ
EMKGKAEILTEDLRLIERILYQFKSIFEQV
>Mature_430_residues
MEQDITLELRSEEIQDVLSKTPIWMIRWGTIVIFSIIVILFYVSYIIRYPDVVSTEIVITTNIPPEKLVSKSSGRIEAIL
ISDKATVKKNTMLAVIENSANYKDVFLLKKIIADFDINDTKKEFPFAVMKNKQLGEIESAFAIFQKDYEVEKLNENLHPF
DVENKAQVSEKTQIKERLEILQQQKEINESELQLQKNEIGRFGILFNKGIISAQEMETKKLSYLQAQKNYKTLLSSISQL
KSSLIDNTKMGHNLQISSTKEEVNLNRNMAQSFYQLKKVIKEWELTNTLRSSVSGVVTFLQVWTENQTINEGDNVFSIIP
DKENGFVGKVKATPLNSGKIKVGQNVNIRLANFPDREFGVLRGKIHNISLVPDKDGNLLLDVSLPDGLQTSYRKRIPFQQ
EMKGKAEILTEDLRLIERILYQFKSIFEQV

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49332; Mature: 49332

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQDITLELRSEEIQDVLSKTPIWMIRWGTIVIFSIIVILFYVSYIIRYPDVVSTEIVIT
CCCCEEEEECHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
TNIPPEKLVSKSSGRIEAILISDKATVKKNTMLAVIENSANYKDVFLLKKIIADFDINDT
ECCCHHHHHCCCCCCEEEEEECCCCEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCC
KKEFPFAVMKNKQLGEIESAFAIFQKDYEVEKLNENLHPFDVENKAQVSEKTQIKERLEI
HHHCCCHHCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
LQQQKEINESELQLQKNEIGRFGILFNKGIISAQEMETKKLSYLQAQKNYKTLLSSISQL
HHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSSLIDNTKMGHNLQISSTKEEVNLNRNMAQSFYQLKKVIKEWELTNTLRSSVSGVVTFL
HHHHHCCCCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVWTENQTINEGDNVFSIIPDKENGFVGKVKATPLNSGKIKVGQNVNIRLANFPDREFGV
HHHCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCEEECCCCEEEEECCCCHHHHH
LRGKIHNISLVPDKDGNLLLDVSLPDGLQTSYRKRIPFQQEMKGKAEILTEDLRLIERIL
HHCEEEEEEEEECCCCCEEEEEECCCCHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHH
YQFKSIFEQV
HHHHHHHHCC
>Mature Secondary Structure
MEQDITLELRSEEIQDVLSKTPIWMIRWGTIVIFSIIVILFYVSYIIRYPDVVSTEIVIT
CCCCEEEEECHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
TNIPPEKLVSKSSGRIEAILISDKATVKKNTMLAVIENSANYKDVFLLKKIIADFDINDT
ECCCHHHHHCCCCCCEEEEEECCCCEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCC
KKEFPFAVMKNKQLGEIESAFAIFQKDYEVEKLNENLHPFDVENKAQVSEKTQIKERLEI
HHHCCCHHCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
LQQQKEINESELQLQKNEIGRFGILFNKGIISAQEMETKKLSYLQAQKNYKTLLSSISQL
HHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSSLIDNTKMGHNLQISSTKEEVNLNRNMAQSFYQLKKVIKEWELTNTLRSSVSGVVTFL
HHHHHCCCCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVWTENQTINEGDNVFSIIPDKENGFVGKVKATPLNSGKIKVGQNVNIRLANFPDREFGV
HHHCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCEEECCCCEEEEECCCCHHHHH
LRGKIHNISLVPDKDGNLLLDVSLPDGLQTSYRKRIPFQQEMKGKAEILTEDLRLIERIL
HHCEEEEEEEEECCCCCEEEEEECCCCHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHH
YQFKSIFEQV
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA