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The map label for this gene is cirA [C]

Identifier: 146302512

GI number: 146302512

Start: 5779981

End: 5782449

Strand: Direct

Name: cirA [C]

Synonym: Fjoh_4785

Alternate gene names: 146302512

Gene position: 5779981-5782449 (Clockwise)

Preceding gene: 146302511

Following gene: 146302513

Centisome position: 94.8

GC content: 34.79

Gene sequence:

>2469_bases
ATGAAACAAATCAATTTTGCTGTAATGCTTGTGCTGTTTTTAACAGGCTTTTACAACTATGCACAACAAGGACCTCCTGC
AAAAAACAAGGTTAAGGTTACCGGAAAAGTTTTTGAAAAAGTAACTAAACAGCCTCTAGAATATGCTACGATTTCGATCA
TGGCTCCAAATGATACAAAAGTTATTGCAGGCGGTATAACCAACCCTAAAGGAGAATTTGAAGTTGCCGTTGCTCCGGGA
ACTTACGATATAAAAGTAGAATTCATTTCGTTTAAATCTACTGAAATTAAACAAAAAAGCATTCAGGACGATACTAATTT
AGGTGTTGTAAACTTATCTGAAGATGCTGCACAGCTAAATGAAGTTGTGGTGCGTGCCGAAAAATCGACGGTAGAAATAA
AACTTGATAAAAAAGTTTACAATGTTGGTCAGGACATGATGGTAAAAGGCGGAACAGTAAGTGATGTTTTAGACAACGTA
CCTTCTGTTTCTGTCGATTCTGAAGGAAATGTAAGTTTAAGAGGAAGTGACAATATTCGTATTTTAATTGACGGAAGACC
TTCACAAGCCATAAACGTAGCTGAGGCACTACGTCAGCTTCCTGCAGATGCAATCGAAAAAGTAGAAGTTATCACCAATC
CATCAGCGCGTTATGACGCCGAAGGTGGATCAGGAATTATCAATATTATTCTAAAAAAGGGTAAAAATCAAGGTTTCAAC
GGAACTTTTATTGCTTCAACAGGACTTCCTGAAACGTATGGTTTAAGTGCAAACGTAAATTATAAAACCGAAAAATTAAA
CTACTTTACTACTGCTGGTTATAACTACAGAACCAACGAAGGCGGCGGTTTAACAAATACATCTTATTATAATGCCGACG
GATCTCCTAAAGGATATTTAGATGAAGATCGCGACACTAAAAGAATTAGAAACGGTTTTAATGCCAGAGGCGGTGTTGAA
TGGACAATTACTCCTACTACATTCTGGACAAACGCTATTAATTATCAAAAAAACACAGGAGAAGACAAAGACCTGATCAA
TTATAATAATTTTGATGCTGCACGTGCTTTTACAGGAAGTACTTATCGATTAAACAATACTGATACTGGAAGCGAGAACG
TAGAATTTACGTCGAACTTAATCAAAAACTTCAACGATAAAGGACATAAACTTACTGCTGATTTATCAGTTTCCAGAAAC
ACAGACAACAGTGATGGTATCATTACAGCTTCGCCAAGTTTTAATACAACTTTAAACGATCAGGTACAAAAACAAGTTTT
ACTACAAGCTGATTATGTACTGCCTTTAGGAAAAGGAAGCCAGTTTGAAGCAGGTTATAAAGGAAGTTTTGGAGACTTAA
ACAACGAATATTACGTTACAGACGAAAACTATGTTAAAGATCCAAACAAATCAAATACTTTAGAATACAAAGAGAACATC
AATGCACTTTATGCACAATATGGTTTAAAAGTGAACAAATTCTCATATTTATTTGGTTTACGCTGGGAAGACACAAATAT
TCAGGTAAACTTATTAGATAACAGTCAATTCAATACAAAAAAATACAACAATCTGTTCCCAAGCGCTTTTATCAGCTACG
AAATTTCAGATCAAAGTAACTTGACTGCGAGCTATAGTAAACGTTTAACCAGACCAAGAGGACGTTTCATGAATCCGGCG
CTTAACTATTCAAGTAACATTAATATTTTTCAGGGAAATCCTGACTTAGATCCATCATTAACAGACAAATATGATGTAGG
ATATATTAAAAGATGGGAGAAAGTAACTTTCAGCACTTCTGCTTATTTTGAAAATACAAAAGATGTTTTCAGTTTTGTCA
GAACGCCAAATGGTGATAATGTAGACGGAATTCCAGTTATTTTAAGCCGTCCTATTAACTTAGGAAGAGAGCAAAAATAT
GGTTTCGAATTTACGTTTAATTACACTCCGTTTAAATGGTGGAGATTAAACAGTAACTTCAATCTTTACAATGTAAAAAC
AACCGGAGAAAACACTTATACAGATACTCAGAATAACTTAGTTGTACAAAATCTTGACAATCAAGCCAACACTTGGTTTG
CAAGAATCAATTCAAAAGTTACATTGCCATACAAAATTGACTGGCAGTTAAACGGAACTTACAATGGAGAACAAAAAACT
GCACAAGGAAAAAATCTTGATCAGTTTTCAATGAATACAGCTTTAAGCAAAGATATTTTAAAAGACAAAGCTACTATTGC
TTTTAACATCAGCGATATCTTTAATTCAAGAATTATGAGATCATATACGTATCTTCAAAATGATACTACTCTTGAAAGTC
AAAAATCGTATAGTGAAATGCAGTTCCGTAAACGTCAATTTAACTTGTCATTTACCTATCGTTTCAACAAACCGAAAAGC
GAAAGAGACAAAAACGCACAGCCTAAAAATGATGGCGGCGGTGAAGGCAGCGGAGATTTCCCTGGATAA

Upstream 100 bases:

>100_bases
AGATTGATTCTAAAATACACTGTTAACATTTTTTTGTGATCTTTCTCTTTAAACCAAAAGGTACATTTGCCGTCTAAGAA
GAAAAAGAAACCAGAAAAAA

Downstream 100 bases:

>100_bases
CATTTGCTAAATTCCAATATAAAAATCCAAATTCCAATTGATTAACTCTCATTGGAATTTGGATTTTTTTTGCACAAAAA
AAAAGAACCCAAATGGGTTC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor Plug; Nb-Dependent Receptor; NB-Dependent Receptor Exported Protein; NB Dependent Receptor; NB-Dependent Receptor Domain-Containing Protein; NB Dependent/Ligand-Gated Channel; NB-Dependent Receptor Plug Domain-Containing Protein; Outer Membrane Receptor Family Transporter; Protein Containing nB-Dependent Receptor Plug Domain; Nb-Dependent Outer Membrane Receptor; Outer Membrane Receptor For Ferrienterochelin And Colicin; Carboxypeptidase-Like Regulatory Region; Outer Membrane Receptor Protein Mostly Fe Transport

Number of amino acids: Translated: 822; Mature: 822

Protein sequence:

>822_residues
MKQINFAVMLVLFLTGFYNYAQQGPPAKNKVKVTGKVFEKVTKQPLEYATISIMAPNDTKVIAGGITNPKGEFEVAVAPG
TYDIKVEFISFKSTEIKQKSIQDDTNLGVVNLSEDAAQLNEVVVRAEKSTVEIKLDKKVYNVGQDMMVKGGTVSDVLDNV
PSVSVDSEGNVSLRGSDNIRILIDGRPSQAINVAEALRQLPADAIEKVEVITNPSARYDAEGGSGIINIILKKGKNQGFN
GTFIASTGLPETYGLSANVNYKTEKLNYFTTAGYNYRTNEGGGLTNTSYYNADGSPKGYLDEDRDTKRIRNGFNARGGVE
WTITPTTFWTNAINYQKNTGEDKDLINYNNFDAARAFTGSTYRLNNTDTGSENVEFTSNLIKNFNDKGHKLTADLSVSRN
TDNSDGIITASPSFNTTLNDQVQKQVLLQADYVLPLGKGSQFEAGYKGSFGDLNNEYYVTDENYVKDPNKSNTLEYKENI
NALYAQYGLKVNKFSYLFGLRWEDTNIQVNLLDNSQFNTKKYNNLFPSAFISYEISDQSNLTASYSKRLTRPRGRFMNPA
LNYSSNINIFQGNPDLDPSLTDKYDVGYIKRWEKVTFSTSAYFENTKDVFSFVRTPNGDNVDGIPVILSRPINLGREQKY
GFEFTFNYTPFKWWRLNSNFNLYNVKTTGENTYTDTQNNLVVQNLDNQANTWFARINSKVTLPYKIDWQLNGTYNGEQKT
AQGKNLDQFSMNTALSKDILKDKATIAFNISDIFNSRIMRSYTYLQNDTTLESQKSYSEMQFRKRQFNLSFTYRFNKPKS
ERDKNAQPKNDGGGEGSGDFPG

Sequences:

>Translated_822_residues
MKQINFAVMLVLFLTGFYNYAQQGPPAKNKVKVTGKVFEKVTKQPLEYATISIMAPNDTKVIAGGITNPKGEFEVAVAPG
TYDIKVEFISFKSTEIKQKSIQDDTNLGVVNLSEDAAQLNEVVVRAEKSTVEIKLDKKVYNVGQDMMVKGGTVSDVLDNV
PSVSVDSEGNVSLRGSDNIRILIDGRPSQAINVAEALRQLPADAIEKVEVITNPSARYDAEGGSGIINIILKKGKNQGFN
GTFIASTGLPETYGLSANVNYKTEKLNYFTTAGYNYRTNEGGGLTNTSYYNADGSPKGYLDEDRDTKRIRNGFNARGGVE
WTITPTTFWTNAINYQKNTGEDKDLINYNNFDAARAFTGSTYRLNNTDTGSENVEFTSNLIKNFNDKGHKLTADLSVSRN
TDNSDGIITASPSFNTTLNDQVQKQVLLQADYVLPLGKGSQFEAGYKGSFGDLNNEYYVTDENYVKDPNKSNTLEYKENI
NALYAQYGLKVNKFSYLFGLRWEDTNIQVNLLDNSQFNTKKYNNLFPSAFISYEISDQSNLTASYSKRLTRPRGRFMNPA
LNYSSNINIFQGNPDLDPSLTDKYDVGYIKRWEKVTFSTSAYFENTKDVFSFVRTPNGDNVDGIPVILSRPINLGREQKY
GFEFTFNYTPFKWWRLNSNFNLYNVKTTGENTYTDTQNNLVVQNLDNQANTWFARINSKVTLPYKIDWQLNGTYNGEQKT
AQGKNLDQFSMNTALSKDILKDKATIAFNISDIFNSRIMRSYTYLQNDTTLESQKSYSEMQFRKRQFNLSFTYRFNKPKS
ERDKNAQPKNDGGGEGSGDFPG
>Mature_822_residues
MKQINFAVMLVLFLTGFYNYAQQGPPAKNKVKVTGKVFEKVTKQPLEYATISIMAPNDTKVIAGGITNPKGEFEVAVAPG
TYDIKVEFISFKSTEIKQKSIQDDTNLGVVNLSEDAAQLNEVVVRAEKSTVEIKLDKKVYNVGQDMMVKGGTVSDVLDNV
PSVSVDSEGNVSLRGSDNIRILIDGRPSQAINVAEALRQLPADAIEKVEVITNPSARYDAEGGSGIINIILKKGKNQGFN
GTFIASTGLPETYGLSANVNYKTEKLNYFTTAGYNYRTNEGGGLTNTSYYNADGSPKGYLDEDRDTKRIRNGFNARGGVE
WTITPTTFWTNAINYQKNTGEDKDLINYNNFDAARAFTGSTYRLNNTDTGSENVEFTSNLIKNFNDKGHKLTADLSVSRN
TDNSDGIITASPSFNTTLNDQVQKQVLLQADYVLPLGKGSQFEAGYKGSFGDLNNEYYVTDENYVKDPNKSNTLEYKENI
NALYAQYGLKVNKFSYLFGLRWEDTNIQVNLLDNSQFNTKKYNNLFPSAFISYEISDQSNLTASYSKRLTRPRGRFMNPA
LNYSSNINIFQGNPDLDPSLTDKYDVGYIKRWEKVTFSTSAYFENTKDVFSFVRTPNGDNVDGIPVILSRPINLGREQKY
GFEFTFNYTPFKWWRLNSNFNLYNVKTTGENTYTDTQNNLVVQNLDNQANTWFARINSKVTLPYKIDWQLNGTYNGEQKT
AQGKNLDQFSMNTALSKDILKDKATIAFNISDIFNSRIMRSYTYLQNDTTLESQKSYSEMQFRKRQFNLSFTYRFNKPKS
ERDKNAQPKNDGGGEGSGDFPG

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92387; Mature: 92387

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQINFAVMLVLFLTGFYNYAQQGPPAKNKVKVTGKVFEKVTKQPLEYATISIMAPNDTK
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCEEEEEEECCCCCE
VIAGGITNPKGEFEVAVAPGTYDIKVEFISFKSTEIKQKSIQDDTNLGVVNLSEDAAQLN
EEECCCCCCCCCEEEEECCCCEEEEEEEEEECCCHHHHHHCCCCCCEEEEEECHHHHHHH
EVVVRAEKSTVEIKLDKKVYNVGQDMMVKGGTVSDVLDNVPSVSVDSEGNVSLRGSDNIR
HHHEEECCCEEEEEECCHHHHCCCCEEECCCCHHHHHHCCCCEEECCCCCEEEECCCCEE
ILIDGRPSQAINVAEALRQLPADAIEKVEVITNPSARYDAEGGSGIINIILKKGKNQGFN
EEEECCCCCHHHHHHHHHHCCHHHHHEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCC
GTFIASTGLPETYGLSANVNYKTEKLNYFTTAGYNYRTNEGGGLTNTSYYNADGSPKGYL
EEEEEECCCCCCCCCEECCCEEEEEEEEEEECCCCEEECCCCCCCCCEEECCCCCCCCCC
DEDRDTKRIRNGFNARGGVEWTITPTTFWTNAINYQKNTGEDKDLINYNNFDAARAFTGS
CCCCHHHHHHCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCHHHEECCC
TYRLNNTDTGSENVEFTSNLIKNFNDKGHKLTADLSVSRNTDNSDGIITASPSFNTTLND
EEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCCHHH
QVQKQVLLQADYVLPLGKGSQFEAGYKGSFGDLNNEYYVTDENYVKDPNKSNTLEYKENI
HHHHHHHHEECEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEHHHHH
NALYAQYGLKVNKFSYLFGLRWEDTNIQVNLLDNSQFNTKKYNNLFPSAFISYEISDQSN
HHHHHHHCCEEEEEEEEEEEEEECCCEEEEEECCCCCCCHHHCCCCCCEEEEEEECCCCC
LTASYSKRLTRPRGRFMNPALNYSSNINIFQGNPDLDPSLTDKYDVGYIKRWEKVTFSTS
CCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCEEEEEEEH
AYFENTKDVFSFVRTPNGDNVDGIPVILSRPINLGREQKYGFEFTFNYTPFKWWRLNSNF
HHHCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCE
NLYNVKTTGENTYTDTQNNLVVQNLDNQANTWFARINSKVTLPYKIDWQLNGTYNGEQKT
EEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEECCEEEEEEEEEEEECCCCCCCCCC
AQGKNLDQFSMNTALSKDILKDKATIAFNISDIFNSRIMRSYTYLQNDTTLESQKSYSEM
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHEECCCCCCHHHHHHHHH
QFRKRQFNLSFTYRFNKPKSERDKNAQPKNDGGGEGSGDFPG
HHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKQINFAVMLVLFLTGFYNYAQQGPPAKNKVKVTGKVFEKVTKQPLEYATISIMAPNDTK
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCEEEEEEECCCCCE
VIAGGITNPKGEFEVAVAPGTYDIKVEFISFKSTEIKQKSIQDDTNLGVVNLSEDAAQLN
EEECCCCCCCCCEEEEECCCCEEEEEEEEEECCCHHHHHHCCCCCCEEEEEECHHHHHHH
EVVVRAEKSTVEIKLDKKVYNVGQDMMVKGGTVSDVLDNVPSVSVDSEGNVSLRGSDNIR
HHHEEECCCEEEEEECCHHHHCCCCEEECCCCHHHHHHCCCCEEECCCCCEEEECCCCEE
ILIDGRPSQAINVAEALRQLPADAIEKVEVITNPSARYDAEGGSGIINIILKKGKNQGFN
EEEECCCCCHHHHHHHHHHCCHHHHHEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCC
GTFIASTGLPETYGLSANVNYKTEKLNYFTTAGYNYRTNEGGGLTNTSYYNADGSPKGYL
EEEEEECCCCCCCCCEECCCEEEEEEEEEEECCCCEEECCCCCCCCCEEECCCCCCCCCC
DEDRDTKRIRNGFNARGGVEWTITPTTFWTNAINYQKNTGEDKDLINYNNFDAARAFTGS
CCCCHHHHHHCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCHHHEECCC
TYRLNNTDTGSENVEFTSNLIKNFNDKGHKLTADLSVSRNTDNSDGIITASPSFNTTLND
EEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCCHHH
QVQKQVLLQADYVLPLGKGSQFEAGYKGSFGDLNNEYYVTDENYVKDPNKSNTLEYKENI
HHHHHHHHEECEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEHHHHH
NALYAQYGLKVNKFSYLFGLRWEDTNIQVNLLDNSQFNTKKYNNLFPSAFISYEISDQSN
HHHHHHHCCEEEEEEEEEEEEEECCCEEEEEECCCCCCCHHHCCCCCCEEEEEEECCCCC
LTASYSKRLTRPRGRFMNPALNYSSNINIFQGNPDLDPSLTDKYDVGYIKRWEKVTFSTS
CCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCEEEEEEEH
AYFENTKDVFSFVRTPNGDNVDGIPVILSRPINLGREQKYGFEFTFNYTPFKWWRLNSNF
HHHCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCE
NLYNVKTTGENTYTDTQNNLVVQNLDNQANTWFARINSKVTLPYKIDWQLNGTYNGEQKT
EEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEECCEEEEEEEEEEEECCCCCCCCCC
AQGKNLDQFSMNTALSKDILKDKATIAFNISDIFNSRIMRSYTYLQNDTTLESQKSYSEM
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHEECCCCCCHHHHHHHHH
QFRKRQFNLSFTYRFNKPKSERDKNAQPKNDGGGEGSGDFPG
HHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA