| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302499
Identifier: 146302499
GI number: 146302499
Start: 5767029
End: 5767406
Strand: Reverse
Name: 146302499
Synonym: Fjoh_4772
Alternate gene names: NA
Gene position: 5767406-5767029 (Counterclockwise)
Preceding gene: 146302500
Following gene: 146302498
Centisome position: 94.6
GC content: 30.42
Gene sequence:
>378_bases ATGAGTAAATTATACGTATATAACCTTGGTTATGGTCTTTTTCCTTTGGATTGGGAATTTTGTTTTTTGACTGTAGATGA ATATAAGGAAAAATTAAAGGAAAAATATTATCAGAATGAAGAGTATAATCATCATATTGCAGGAGATTTATCGGAAACTT TTTCTTTGATAGATAAAACTGTTGCGAAGGCTAAAAAACATTTTAAAAAAGAATTTCATGGGGATGAAAATCTACGTTGC CTTCCAATGGTTTTTCCTATACCTAAAGGGGATCATACAAATGGAGTTGCATTTTGTGTTATATTGAAAAGGGATGAGGA CGGTGATACCCTAGTTTATTCTCCAATTCCGTTGCAATATCTAAATGAAAATATATAA
Upstream 100 bases:
>100_bases GATTAATCTCTTATTTTAAAGATTTTTAGCTATGCCAATTAGGAAGGATTAAATGGTTTTTTAGTCCTATAAAAAATAGC TTTTTGTTAAAATTGATTCG
Downstream 100 bases:
>100_bases TATATGATAAAATTAGCACTTTATTCAGCTTGTGTAGGTGGTTTTATAAATTTACGTAAATGGCAGCCAGAAAATGAGGA AGTTGTCTCAGAGCTGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSKLYVYNLGYGLFPLDWEFCFLTVDEYKEKLKEKYYQNEEYNHHIAGDLSETFSLIDKTVAKAKKHFKKEFHGDENLRC LPMVFPIPKGDHTNGVAFCVILKRDEDGDTLVYSPIPLQYLNENI
Sequences:
>Translated_125_residues MSKLYVYNLGYGLFPLDWEFCFLTVDEYKEKLKEKYYQNEEYNHHIAGDLSETFSLIDKTVAKAKKHFKKEFHGDENLRC LPMVFPIPKGDHTNGVAFCVILKRDEDGDTLVYSPIPLQYLNENI >Mature_124_residues SKLYVYNLGYGLFPLDWEFCFLTVDEYKEKLKEKYYQNEEYNHHIAGDLSETFSLIDKTVAKAKKHFKKEFHGDENLRCL PMVFPIPKGDHTNGVAFCVILKRDEDGDTLVYSPIPLQYLNENI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14675; Mature: 14544
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLYVYNLGYGLFPLDWEFCFLTVDEYKEKLKEKYYQNEEYNHHIAGDLSETFSLIDKT CCEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH VAKAKKHFKKEFHGDENLRCLPMVFPIPKGDHTNGVAFCVILKRDEDGDTLVYSPIPLQY HHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCEEEECCCCHHH LNENI CCCCC >Mature Secondary Structure SKLYVYNLGYGLFPLDWEFCFLTVDEYKEKLKEKYYQNEEYNHHIAGDLSETFSLIDKT CEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH VAKAKKHFKKEFHGDENLRCLPMVFPIPKGDHTNGVAFCVILKRDEDGDTLVYSPIPLQY HHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCEEEECCCCHHH LNENI CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA