Click here to switch to the map view.

The map label for this gene is 146302459

Identifier: 146302459

GI number: 146302459

Start: 5719262

End: 5720590

Strand: Reverse

Name: 146302459

Synonym: Fjoh_4732

Alternate gene names: NA

Gene position: 5720590-5719262 (Counterclockwise)

Preceding gene: 146302460

Following gene: 146302458

Centisome position: 93.83

GC content: 36.42

Gene sequence:

>1329_bases
ATGACAGATTTAGAATATAATTATAAAGGAGTTTCGACGTATAGTAAAACAAAAGGCATTAATAATTTGGTTTTGGCACA
TCAAACCGAAATCGAGGAAGTCAATAATATTCCGTGTTTTTTCTGGGGAAGTTTAACAGATCCTTATGTAACGGCAAAAT
GCTGGAGTACGATTGCAAAAGTCGTTCGTTCGAGTTTTGGACCAATTCCGCCAAGTCTTCGTGATCCTATTGTTTCTGCG
GGATCAGAAAGACTTCGTTTTGAGGGATTTTCTTCCTGCAACGGAGTTTATGTAAGATTAGACATGAAACCTGAAGCCGT
TGACGGAGAATTTATCGCAAACGGAACAACAAATGTTGACTTTAATGATCCAATGCTGAATGCGCTGAATGCGATTCAAA
AAAACGAAAAAGTAACCCTTGCCGTTGGTCAGCAGGACGTTCAGGTAATTACCAGCAAAGCAAAAGTAGTCGAGAAAAAA
GTGACTTTGCCAATGCGCTGGATAAAAGGATTAACAAGCGTACAGTTGTATCTGGCTGATATGGATTTAAAGTTCGAATT
GAATAAAATCCAAACCATTCAGCTTTTTCAAAGTCTGCCAAAAGGAAATGTAAAAGGTGATTTCTTTATAACCAAAAGAG
CCGGAAAATTTATGTTTTCGACATTAGCCACAGCAGACAGTGTTAGAATTGGTGGTGTACAAAGATTGCGTTTATTAGAA
GGTATTCTGGCAATTGTAGATAAGATTTTTATTTACGAATCTGATGATAAACAAACTTGTGCTGTTGTCTGCGAATTTGG
AAAAATGCAGTTGTTAATGGCTTTTTCTCCAGATTCGTACCGCGGATTTTCGGGTGAAGGAAACGTATTGGAAACCATGA
CAGAAAACCTGCCTATAGAATGGGTTTACGGATTAAACAGTTTATTAAAATCAAATGAAATGTTTGACCCAACAATGCTT
TCGATAGAAAATGATATTGATTTTGGAACAATGGATAATCTGACTTCCAATTTATCTTCGATGGGATTATTGGGTTATGA
TTTAAGCGAAAAAGCACATTTTTACCGTCGTCTTCCTTTTAAAACAGAGCGTATTTTGTCTTTAAACCCGAGATTAAAAA
ATGCCAAAAAACTAATCGATAATGAAGAAGTAGAAATCGTTGAAAGAAAGGCTGACTATATCGAAGCCAAAGTAAAAGGT
TCAGGCGTGGTGCATAAAGTAATTATCGACAATACTTCGCAAAGATGCACCTGCGATTGGTTTACAGCTTATCAGGGAAA
AAGAGGAATCTGTAAACATATTTTAGCAGTAAAAATGACGATTTCTTAG

Upstream 100 bases:

>100_bases
CCAATCAAAAACCTACGCCAAAAGCCGTTGCATTTTTTGAACAATGGAAAGACAATTCAGCACTTAAATCATTAGTGAAG
CAGATTTTAAAATAAACAAA

Downstream 100 bases:

>100_bases
TATAGTATATTGTGATAAATTCATGGTTTTTGCAATTATTTGTTAAATTAAGGTGAAATATGCTACATTTGTACCTGTAA
TTAAAAATAGAAAAAATACA

Product: zinc finger SWIM domain-containing protein

Products: NA

Alternate protein names: Zinc Finger SWIM Domain-Containing Protein; SWIM Zinc Finger Protein; SWIM Zinc Finger; Peroxiredoxin

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MTDLEYNYKGVSTYSKTKGINNLVLAHQTEIEEVNNIPCFFWGSLTDPYVTAKCWSTIAKVVRSSFGPIPPSLRDPIVSA
GSERLRFEGFSSCNGVYVRLDMKPEAVDGEFIANGTTNVDFNDPMLNALNAIQKNEKVTLAVGQQDVQVITSKAKVVEKK
VTLPMRWIKGLTSVQLYLADMDLKFELNKIQTIQLFQSLPKGNVKGDFFITKRAGKFMFSTLATADSVRIGGVQRLRLLE
GILAIVDKIFIYESDDKQTCAVVCEFGKMQLLMAFSPDSYRGFSGEGNVLETMTENLPIEWVYGLNSLLKSNEMFDPTML
SIENDIDFGTMDNLTSNLSSMGLLGYDLSEKAHFYRRLPFKTERILSLNPRLKNAKKLIDNEEVEIVERKADYIEAKVKG
SGVVHKVIIDNTSQRCTCDWFTAYQGKRGICKHILAVKMTIS

Sequences:

>Translated_442_residues
MTDLEYNYKGVSTYSKTKGINNLVLAHQTEIEEVNNIPCFFWGSLTDPYVTAKCWSTIAKVVRSSFGPIPPSLRDPIVSA
GSERLRFEGFSSCNGVYVRLDMKPEAVDGEFIANGTTNVDFNDPMLNALNAIQKNEKVTLAVGQQDVQVITSKAKVVEKK
VTLPMRWIKGLTSVQLYLADMDLKFELNKIQTIQLFQSLPKGNVKGDFFITKRAGKFMFSTLATADSVRIGGVQRLRLLE
GILAIVDKIFIYESDDKQTCAVVCEFGKMQLLMAFSPDSYRGFSGEGNVLETMTENLPIEWVYGLNSLLKSNEMFDPTML
SIENDIDFGTMDNLTSNLSSMGLLGYDLSEKAHFYRRLPFKTERILSLNPRLKNAKKLIDNEEVEIVERKADYIEAKVKG
SGVVHKVIIDNTSQRCTCDWFTAYQGKRGICKHILAVKMTIS
>Mature_441_residues
TDLEYNYKGVSTYSKTKGINNLVLAHQTEIEEVNNIPCFFWGSLTDPYVTAKCWSTIAKVVRSSFGPIPPSLRDPIVSAG
SERLRFEGFSSCNGVYVRLDMKPEAVDGEFIANGTTNVDFNDPMLNALNAIQKNEKVTLAVGQQDVQVITSKAKVVEKKV
TLPMRWIKGLTSVQLYLADMDLKFELNKIQTIQLFQSLPKGNVKGDFFITKRAGKFMFSTLATADSVRIGGVQRLRLLEG
ILAIVDKIFIYESDDKQTCAVVCEFGKMQLLMAFSPDSYRGFSGEGNVLETMTENLPIEWVYGLNSLLKSNEMFDPTMLS
IENDIDFGTMDNLTSNLSSMGLLGYDLSEKAHFYRRLPFKTERILSLNPRLKNAKKLIDNEEVEIVERKADYIEAKVKGS
GVVHKVIIDNTSQRCTCDWFTAYQGKRGICKHILAVKMTIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49621; Mature: 49490

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLEYNYKGVSTYSKTKGINNLVLAHQTEIEEVNNIPCFFWGSLTDPYVTAKCWSTIAK
CCCCCCCCCCCCCHHHHCCCCCEEEEECCCHHHHCCCCEEEECCCCCCCHHHHHHHHHHH
VVRSSFGPIPPSLRDPIVSAGSERLRFEGFSSCNGVYVRLDMKPEAVDGEFIANGTTNVD
HHHHHCCCCCCCHHCHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCCCCEEECCCCCCC
FNDPMLNALNAIQKNEKVTLAVGQQDVQVITSKAKVVEKKVTLPMRWIKGLTSVQLYLAD
CCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEC
MDLKFELNKIQTIQLFQSLPKGNVKGDFFITKRAGKFMFSTLATADSVRIGGVQRLRLLE
CCEEEECCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEECCHHHHHHHH
GILAIVDKIFIYESDDKQTCAVVCEFGKMQLLMAFSPDSYRGFSGEGNVLETMTENLPIE
HHHHHHHHEEEEECCCCCEEHEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCEE
WVYGLNSLLKSNEMFDPTMLSIENDIDFGTMDNLTSNLSSMGLLGYDLSEKAHFYRRLPF
EEHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEECCCCHHHHHHHCCCC
KTERILSLNPRLKNAKKLIDNEEVEIVERKADYIEAKVKGSGVVHKVIIDNTSQRCTCDW
CCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCCEEEEE
FTAYQGKRGICKHILAVKMTIS
HHHCCCCCHHHHHHHEEEEECC
>Mature Secondary Structure 
TDLEYNYKGVSTYSKTKGINNLVLAHQTEIEEVNNIPCFFWGSLTDPYVTAKCWSTIAK
CCCCCCCCCCCCHHHHCCCCCEEEEECCCHHHHCCCCEEEECCCCCCCHHHHHHHHHHH
VVRSSFGPIPPSLRDPIVSAGSERLRFEGFSSCNGVYVRLDMKPEAVDGEFIANGTTNVD
HHHHHCCCCCCCHHCHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCCCCEEECCCCCCC
FNDPMLNALNAIQKNEKVTLAVGQQDVQVITSKAKVVEKKVTLPMRWIKGLTSVQLYLAD
CCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEC
MDLKFELNKIQTIQLFQSLPKGNVKGDFFITKRAGKFMFSTLATADSVRIGGVQRLRLLE
CCEEEECCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEECCHHHHHHHH
GILAIVDKIFIYESDDKQTCAVVCEFGKMQLLMAFSPDSYRGFSGEGNVLETMTENLPIE
HHHHHHHHEEEEECCCCCEEHEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCEE
WVYGLNSLLKSNEMFDPTMLSIENDIDFGTMDNLTSNLSSMGLLGYDLSEKAHFYRRLPF
EEHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEECCCCHHHHHHHCCCC
KTERILSLNPRLKNAKKLIDNEEVEIVERKADYIEAKVKGSGVVHKVIIDNTSQRCTCDW
CCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCCEEEEE
FTAYQGKRGICKHILAVKMTIS
HHHCCCCCHHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA