| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302449
Identifier: 146302449
GI number: 146302449
Start: 5702980
End: 5703543
Strand: Direct
Name: 146302449
Synonym: Fjoh_4722
Alternate gene names: NA
Gene position: 5702980-5703543 (Clockwise)
Preceding gene: 146302448
Following gene: 146302450
Centisome position: 93.54
GC content: 27.84
Gene sequence:
>564_bases ATGCAAGAAAAAATAATAATCGCTTATGGCCTAAACTGCATTGATAATCATGAGTATTTTTTCGAAAATGCTCCCAAATC TATATTTTGTAATGAATGTGAATGCTGTATAGATTTTTCTTATTTGCCAACTGATTTTAAAATAAGAAATAAAGCAGACT ATAGCGCAACATATGATCGTAGATTAATTTCTTCTTTGAAATTCAAAGATTTTATAGAAGAGTTAAACTTTAATGTCGAT TTTCTTTCACTGAACAAAGACAGTTCACTTTTTTTAATGAAACCTTTGGAAATTTTAGAATTTTCTGCATGGAAACGAGG AAGATTTTGTGACAAATGCAACCAATATAATGATCAGGTAGTTCCTGAACCAGATTTTTTTTATAAAACGGGAAAAATAA TTGAAGAAGGAATATTTTCAACCAGTGTAGGTTTCGGAAGTGGAAAAGAAATATACCCAAATATTATTCTTGGAATAGAA ACTGCTCAAATAATCAAAGAGGCTGTCAAAAAATATAAATTTAGAGGTTTATCTATAAATGAAATAACAAGTTTAAAAAT TTAG
Upstream 100 bases:
>100_bases TACTGCTTTAGTTTGCAAAAAAAGCTTTTTTTTGCAGGTTTTTTCTTTAAATTTATTGTTTTATATAAGTGTTATTAATA ACTTTAAATACAAAAACAAA
Downstream 100 bases:
>100_bases GATTGTAAATAATTCTTATAACTATTCTACAAATTAAACAGTAAGAAAATATATCAAAAATTAAACATTGCTTAACGCGG TGTATTCATAAAAGTAGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MQEKIIIAYGLNCIDNHEYFFENAPKSIFCNECECCIDFSYLPTDFKIRNKADYSATYDRRLISSLKFKDFIEELNFNVD FLSLNKDSSLFLMKPLEILEFSAWKRGRFCDKCNQYNDQVVPEPDFFYKTGKIIEEGIFSTSVGFGSGKEIYPNIILGIE TAQIIKEAVKKYKFRGLSINEITSLKI
Sequences:
>Translated_187_residues MQEKIIIAYGLNCIDNHEYFFENAPKSIFCNECECCIDFSYLPTDFKIRNKADYSATYDRRLISSLKFKDFIEELNFNVD FLSLNKDSSLFLMKPLEILEFSAWKRGRFCDKCNQYNDQVVPEPDFFYKTGKIIEEGIFSTSVGFGSGKEIYPNIILGIE TAQIIKEAVKKYKFRGLSINEITSLKI >Mature_187_residues MQEKIIIAYGLNCIDNHEYFFENAPKSIFCNECECCIDFSYLPTDFKIRNKADYSATYDRRLISSLKFKDFIEELNFNVD FLSLNKDSSLFLMKPLEILEFSAWKRGRFCDKCNQYNDQVVPEPDFFYKTGKIIEEGIFSTSVGFGSGKEIYPNIILGIE TAQIIKEAVKKYKFRGLSINEITSLKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21743; Mature: 21743
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEKIIIAYGLNCIDNHEYFFENAPKSIFCNECECCIDFSYLPTDFKIRNKADYSATYDR CCCCEEEEECCCEECCCCHHCCCCCCCEECCCCCEEEECEECCCCEEECCCCCCCHHHHH RLISSLKFKDFIEELNFNVDFLSLNKDSSLFLMKPLEILEFSAWKRGRFCDKCNQYNDQV HHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCHHHHHHCCCCCCCCHHHHCCCCCCC VPEPDFFYKTGKIIEEGIFSTSVGFGSGKEIYPNIILGIETAQIIKEAVKKYKFRGLSIN CCCCCHHHHHHHHHHHCCHHCCCCCCCCCEECCEEEEECCHHHHHHHHHHHHHHCCCCHH EITSLKI CEEEECC >Mature Secondary Structure MQEKIIIAYGLNCIDNHEYFFENAPKSIFCNECECCIDFSYLPTDFKIRNKADYSATYDR CCCCEEEEECCCEECCCCHHCCCCCCCEECCCCCEEEECEECCCCEEECCCCCCCHHHHH RLISSLKFKDFIEELNFNVDFLSLNKDSSLFLMKPLEILEFSAWKRGRFCDKCNQYNDQV HHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCHHHHHHCCCCCCCCHHHHCCCCCCC VPEPDFFYKTGKIIEEGIFSTSVGFGSGKEIYPNIILGIETAQIIKEAVKKYKFRGLSIN CCCCCHHHHHHHHHHHCCHHCCCCCCCCCEECCEEEEECCHHHHHHHHHHHHHHCCCCHH EITSLKI CEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA