Click here to switch to the map view.

The map label for this gene is ydiI [C]

Identifier: 146302446

GI number: 146302446

Start: 5698486

End: 5698917

Strand: Reverse

Name: ydiI [C]

Synonym: Fjoh_4719

Alternate gene names: 146302446

Gene position: 5698917-5698486 (Counterclockwise)

Preceding gene: 146302452

Following gene: 146302445

Centisome position: 93.47

GC content: 37.5

Gene sequence:

>432_bases
ATGAATTATACAAAAGAGCAGATTTTAGCGCGCTGTAATGAGTTTTCTAAAAACACATTAATGGAAACGCTGAAAATTGA
ATATATCGACGCAGGCGAAGATTTTTTAACTGCAAAAATGCCTGTAAATCCAAGTGTTCACCAGCCAATGGGATTACTGC
ACGGAGGCGCTTCTGTTGCTTTGGCAGAAAGTGTGGGCAGTGCGGCTTCTTTCTTCTTTATCAATCCAAAAGAACAGGAA
GTAAGAGGAATCGAAATCTCGGCAAATCATTTAAAAAGTATTCGCGAAGGTTATGTTTTTGGTACAGCCAGAATTATCCA
TAAAGGAAGAAGCCTTCATCTTTGGGAAATCAAAATTACAGATGAAGAAGGAAATCTGGTTTCGCTTTGTAAACTGACGA
ATATGGTTTTAGACAGAAAGAAAAGTGAATAA

Upstream 100 bases:

>100_bases
AAAAAACTGACAAGTTTATAAATGATTTTTAATTTTAGAATCTGATTTTTCGATTTGTGTCTTATCTTTCTTTAATTTTA
CGATTTTAAAGTTTATTTTA

Downstream 100 bases:

>100_bases
ATTATGAATCCATTTTTCTTAAAATTTAAAAATCATAAAGAACAAAATTTACCTTTTGTACTTTATTCAAAACCCAATTC
TGGAAATCTTATTGGTTTTT

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNYTKEQILARCNEFSKNTLMETLKIEYIDAGEDFLTAKMPVNPSVHQPMGLLHGGASVALAESVGSAASFFFINPKEQE
VRGIEISANHLKSIREGYVFGTARIIHKGRSLHLWEIKITDEEGNLVSLCKLTNMVLDRKKSE

Sequences:

>Translated_143_residues
MNYTKEQILARCNEFSKNTLMETLKIEYIDAGEDFLTAKMPVNPSVHQPMGLLHGGASVALAESVGSAASFFFINPKEQE
VRGIEISANHLKSIREGYVFGTARIIHKGRSLHLWEIKITDEEGNLVSLCKLTNMVLDRKKSE
>Mature_143_residues
MNYTKEQILARCNEFSKNTLMETLKIEYIDAGEDFLTAKMPVNPSVHQPMGLLHGGASVALAESVGSAASFFFINPKEQE
VRGIEISANHLKSIREGYVFGTARIIHKGRSLHLWEIKITDEEGNLVSLCKLTNMVLDRKKSE

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Escherichia coli, GI1787976, Length=137, Percent_Identity=41.6058394160584, Blast_Score=109, Evalue=9e-26,
Organism=Escherichia coli, GI1786813, Length=137, Percent_Identity=42.3357664233577, Blast_Score=108, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15995; Mature: 15995

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYTKEQILARCNEFSKNTLMETLKIEYIDAGEDFLTAKMPVNPSVHQPMGLLHGGASVA
CCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEE
LAESVGSAASFFFINPKEQEVRGIEISANHLKSIREGYVFGTARIIHKGRSLHLWEIKIT
EHHHCCCCEEEEEECCCHHHHCEEEECHHHHHHHHCCEEEEHHHHEECCCCEEEEEEEEE
DEEGNLVSLCKLTNMVLDRKKSE
CCCCCEEHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNYTKEQILARCNEFSKNTLMETLKIEYIDAGEDFLTAKMPVNPSVHQPMGLLHGGASVA
CCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEE
LAESVGSAASFFFINPKEQEVRGIEISANHLKSIREGYVFGTARIIHKGRSLHLWEIKIT
EHHHCCCCEEEEEECCCHHHHCEEEECHHHHHHHHCCEEEEHHHHEECCCCEEEEEEEEE
DEEGNLVSLCKLTNMVLDRKKSE
CCCCCEEHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]