| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302428
Identifier: 146302428
GI number: 146302428
Start: 5677844
End: 5678362
Strand: Direct
Name: 146302428
Synonym: Fjoh_4701
Alternate gene names: NA
Gene position: 5677844-5678362 (Clockwise)
Preceding gene: 146302427
Following gene: 146302429
Centisome position: 93.13
GC content: 31.98
Gene sequence:
>519_bases ATGATATCAAATTTCAATTTACAGCCTGAAGTTTTAGAAAATGAACTCACAAAACTAATCCCGTTAAAGGAAAAAGATTT TGAAGCATTATTTGAAGCAGCTTCTGATCCGCTGATTTGGGAACAGAATCCTGCAAAAAACCGACATGAAAGAGAGGCTT TTAAAACTTTTTTTGATATCATAATTACAAAAGGTTCGTTCTTAATTCTTGATAAACATACCAATGAGATAATAGGAACA ACCAGTTTTTATGATTACAATCCCGAAAAATCAAGCGTTGGAATTGGCTATACTTTTATAACCAGAAAATATTGGGGCGG ACCGTATAACAAAGCAAACAAAAAATTAATGATTGATTATGCTTTTCAGCATGTTAATTCGGTGCTTTTTCATGTTGGAG CAGAAAATTTTCGTTCGCAGAAAGCCGTTTTAAAACTCGGAGCAGAAAAAATTAATGATATCCTATTTAAGGTAAATGGT GTTGATACGCCGTATTTTGAATATGAATTGAAGAAATAA
Upstream 100 bases:
>100_bases GATTAAAATGGAGAATGTTTCATGCGTTCAGATCAAAAAGATTTAGAGCCCCTAAATGCATTAATCAGCAGACAAAAAAC TAACAGAAAAACCAAAAATC
Downstream 100 bases:
>100_bases TGAGACTTGAAATAAGAAGCAAGAGGAAAGATTTTGACCTTCTAGATTATCTTACCTCTTGCTTTTCAAAATAATAAAAA AAACAAAAATGAAAAGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; GNAT Family Acetyltransferase; Isoleucyl-TRNA Synthetase
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MISNFNLQPEVLENELTKLIPLKEKDFEALFEAASDPLIWEQNPAKNRHEREAFKTFFDIIITKGSFLILDKHTNEIIGT TSFYDYNPEKSSVGIGYTFITRKYWGGPYNKANKKLMIDYAFQHVNSVLFHVGAENFRSQKAVLKLGAEKINDILFKVNG VDTPYFEYELKK
Sequences:
>Translated_172_residues MISNFNLQPEVLENELTKLIPLKEKDFEALFEAASDPLIWEQNPAKNRHEREAFKTFFDIIITKGSFLILDKHTNEIIGT TSFYDYNPEKSSVGIGYTFITRKYWGGPYNKANKKLMIDYAFQHVNSVLFHVGAENFRSQKAVLKLGAEKINDILFKVNG VDTPYFEYELKK >Mature_172_residues MISNFNLQPEVLENELTKLIPLKEKDFEALFEAASDPLIWEQNPAKNRHEREAFKTFFDIIITKGSFLILDKHTNEIIGT TSFYDYNPEKSSVGIGYTFITRKYWGGPYNKANKKLMIDYAFQHVNSVLFHVGAENFRSQKAVLKLGAEKINDILFKVNG VDTPYFEYELKK
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19938; Mature: 19938
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISNFNLQPEVLENELTKLIPLKEKDFEALFEAASDPLIWEQNPAKNRHEREAFKTFFDI CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHH IITKGSFLILDKHTNEIIGTTSFYDYNPEKSSVGIGYTFITRKYWGGPYNKANKKLMIDY HHCCCCEEEEECCCCCEEECCEEECCCCCCCCCCCCCEEEEHHHCCCCCCCCCCEEEHHH AFQHVNSVLFHVGAENFRSQKAVLKLGAEKINDILFKVNGVDTPYFEYELKK HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECC >Mature Secondary Structure MISNFNLQPEVLENELTKLIPLKEKDFEALFEAASDPLIWEQNPAKNRHEREAFKTFFDI CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHH IITKGSFLILDKHTNEIIGTTSFYDYNPEKSSVGIGYTFITRKYWGGPYNKANKKLMIDY HHCCCCEEEEECCCCCEEECCEEECCCCCCCCCCCCCEEEEHHHCCCCCCCCCCEEEHHH AFQHVNSVLFHVGAENFRSQKAVLKLGAEKINDILFKVNGVDTPYFEYELKK HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA