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The map label for this gene is rocF [H]

Identifier: 146302414

GI number: 146302414

Start: 5667378

End: 5668280

Strand: Direct

Name: rocF [H]

Synonym: Fjoh_4687

Alternate gene names: 146302414

Gene position: 5667378-5668280 (Clockwise)

Preceding gene: 146302413

Following gene: 146302415

Centisome position: 92.96

GC content: 36.88

Gene sequence:

>903_bases
ATGAAAGAAATAACTATTGTCGAATTCACTTCTAATTTGGGCTTAAAAGAACCTCAAACCGGAAAAGAACCAGGCGTAAA
CCGTCTGCCCGATTGGTTATGGAAACACAATCTTCATAAAGCCATTACACCAAAAAATATCGTAAGACTTGATCCGCCCA
GATATTCAAACATAAAAGATCCTCAAACTACTATTTTAAATGCAGACTCATTAGTTACTTATGCCAGAGAACAGGCTTAT
TTGATAAACAATTTAATCAGCGCCAATAAATTTCCTTTTGTACTTGGCGGTGACTGCAGTATACTTTTAGGAACCGCAAT
GGCATTAAAGCAAAAAGGAAATTACGGTCTATTCTATCTCGACGGTCATACTGATTTTATGGATGTTTCTTTATCTGAAA
CCGGCGGTACAGGCGGCATGATTGCGTCTATTGTTACTGGAAACGGACACGAAAAATTAACCAATATTCTTAACTTGTCT
CCATACATAAAAGAAGAAAACCTTTGGTGCGTGGGCAATCGCGAATATGATGACGAATACGAAAATGAAATCAGAAAATC
TTCTGCAGTATATTTAAGTTTAAAAGAATTACGAAAACAAGGTATTAAAAACTCTGTACAGTCTTTTCTTTTAGAAGTTG
AAAGTAAAAAGCTCGATGGTTTCTGGCTGCACATCGATGTCGATGTTTTAAACGACTCTGTTATGCCCTGCGTGGACAGC
CGAACTCCAGACGGACTGACTTATGACGAATTTAATGAACTTACCTCCTATTTGTTTCAAAGTCAAAAACTAAGCGGACT
CGAAATTACAATTCTCGATCCGGATTTAGACCAAACCGGAGAATACACTAAGGAATTTGTCGCTAATATTACCTCAACTT
TTAATCAGAACTTCAACAATTAG

Upstream 100 bases:

>100_bases
TTTAATTTGCAATAAAACAGATCGGATTTTTGTTTTTGGACTGTTAAAAAAACTTCCACAGCCATATATTTTAATAACTT
TAGGTTCAAAAAAAAGCATT

Downstream 100 bases:

>100_bases
TATTTAAAACTTAAAAAAGCTGCTTTTAAAAGAATAGAGCAGCAAATCATTTCATGGAAATAACCGAAATTAGAAATAAA
GATTACGAAACACTGAAAAA

Product: arginase/agmatinase/formiminoglutamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKEITIVEFTSNLGLKEPQTGKEPGVNRLPDWLWKHNLHKAITPKNIVRLDPPRYSNIKDPQTTILNADSLVTYAREQAY
LINNLISANKFPFVLGGDCSILLGTAMALKQKGNYGLFYLDGHTDFMDVSLSETGGTGGMIASIVTGNGHEKLTNILNLS
PYIKEENLWCVGNREYDDEYENEIRKSSAVYLSLKELRKQGIKNSVQSFLLEVESKKLDGFWLHIDVDVLNDSVMPCVDS
RTPDGLTYDEFNELTSYLFQSQKLSGLEITILDPDLDQTGEYTKEFVANITSTFNQNFNN

Sequences:

>Translated_300_residues
MKEITIVEFTSNLGLKEPQTGKEPGVNRLPDWLWKHNLHKAITPKNIVRLDPPRYSNIKDPQTTILNADSLVTYAREQAY
LINNLISANKFPFVLGGDCSILLGTAMALKQKGNYGLFYLDGHTDFMDVSLSETGGTGGMIASIVTGNGHEKLTNILNLS
PYIKEENLWCVGNREYDDEYENEIRKSSAVYLSLKELRKQGIKNSVQSFLLEVESKKLDGFWLHIDVDVLNDSVMPCVDS
RTPDGLTYDEFNELTSYLFQSQKLSGLEITILDPDLDQTGEYTKEFVANITSTFNQNFNN
>Mature_300_residues
MKEITIVEFTSNLGLKEPQTGKEPGVNRLPDWLWKHNLHKAITPKNIVRLDPPRYSNIKDPQTTILNADSLVTYAREQAY
LINNLISANKFPFVLGGDCSILLGTAMALKQKGNYGLFYLDGHTDFMDVSLSETGGTGGMIASIVTGNGHEKLTNILNLS
PYIKEENLWCVGNREYDDEYENEIRKSSAVYLSLKELRKQGIKNSVQSFLLEVESKKLDGFWLHIDVDVLNDSVMPCVDS
RTPDGLTYDEFNELTSYLFQSQKLSGLEITILDPDLDQTGEYTKEFVANITSTFNQNFNN

Specific function: Unknown

COG id: COG0010

COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginase family [H]

Homologues:

Organism=Homo sapiens, GI10947139, Length=225, Percent_Identity=24.4444444444444, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71996843, Length=222, Percent_Identity=28.8288288288288, Blast_Score=78, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014033
- InterPro:   IPR006035
- InterPro:   IPR020855 [H]

Pfam domain/function: PF00491 Arginase [H]

EC number: =3.5.3.1 [H]

Molecular weight: Translated: 33821; Mature: 33821

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEITIVEFTSNLGLKEPQTGKEPGVNRLPDWLWKHNLHKAITPKNIVRLDPPRYSNIKD
CCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCHHCCCCCCEEEECCCCCCCCCC
PQTTILNADSLVTYAREQAYLINNLISANKFPFVLGGDCSILLGTAMALKQKGNYGLFYL
CHHEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEE
DGHTDFMDVSLSETGGTGGMIASIVTGNGHEKLTNILNLSPYIKEENLWCVGNREYDDEY
CCCCCEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHCCCCCEECCCEEEECCCCCCHHH
ENEIRKSSAVYLSLKELRKQGIKNSVQSFLLEVESKKLDGFWLHIDVDVLNDSVMPCVDS
HHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCC
RTPDGLTYDEFNELTSYLFQSQKLSGLEITILDPDLDQTGEYTKEFVANITSTFNQNFNN
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKEITIVEFTSNLGLKEPQTGKEPGVNRLPDWLWKHNLHKAITPKNIVRLDPPRYSNIKD
CCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCHHCCCCCCEEEECCCCCCCCCC
PQTTILNADSLVTYAREQAYLINNLISANKFPFVLGGDCSILLGTAMALKQKGNYGLFYL
CHHEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEE
DGHTDFMDVSLSETGGTGGMIASIVTGNGHEKLTNILNLSPYIKEENLWCVGNREYDDEY
CCCCCEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHCCCCCEECCCEEEECCCCCCHHH
ENEIRKSSAVYLSLKELRKQGIKNSVQSFLLEVESKKLDGFWLHIDVDVLNDSVMPCVDS
HHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCC
RTPDGLTYDEFNELTSYLFQSQKLSGLEITILDPDLDQTGEYTKEFVANITSTFNQNFNN
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9339546 [H]