| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302400
Identifier: 146302400
GI number: 146302400
Start: 5655454
End: 5656143
Strand: Reverse
Name: 146302400
Synonym: Fjoh_4673
Alternate gene names: NA
Gene position: 5656143-5655454 (Counterclockwise)
Preceding gene: 146302433
Following gene: 146302393
Centisome position: 92.77
GC content: 29.28
Gene sequence:
>690_bases ATGAAAAAATTTATGCTCTTTTTAGCCTTAACGCTATTTTTATCAATTACGTCTTGTGATTCTTCAAGTGATGATTTAGT TGATGCCCAAAATGTTGAAAAGCTTAACAAACAAAAACAAATCTTAACTAAATTAGAGCAGCTAGGCATTGATTCTAAAA ATGTAACATTTATAGATAATGTATCTACGGATGGAAGAATAGTAGTAGAATCTATTGATGATCTTGCTGAAATTTTCCCA AAAGAATTAAATGATGAAGGCAAAATACAAGAAATGATTTCCAAGGAAAGTTCTGCACAAACTATTAAAAATCTTTCAAC TGCTAAATCTTTCGATCTTTCGGAATACCAGAGGCTGTCATCAACAATTCCTGTTCCTAATTCATCAATGACAGTATATT ATGAATTTTGGTATAATTCATTTTATATGAGTTATAACTGGAATGATGGGGTAAAGGATGTTAGTGTAGCAACTATTAAT GGAAACGGTGTTTATTTTAGTTACAATGCTGTTAATTATTCAGCAAATGCTAGTTATACAGTAAATATTTATGGTAAGTT TTATTATCCAATAATTATTGATGGACAAAACGCGAATATTGAACGACCAGCAAAAATAATTTGCTTTTTTAACCCTAATT TAGAATATACGACATTCCCTTGGCAGCAATATATCTTCTTTACTAATTAA
Upstream 100 bases:
>100_bases TCGGTGTGTTTTTGTATTACTTTAGTTACTTTTTTTGTTTTCATTTTAAGAAAAACGTTTGTATTATAATCCTTTGTAAC TTTTAATTTTATATACCACT
Downstream 100 bases:
>100_bases GTTGTAGTAAAAATTTTTCGTTTTAGGACGCGACAGACAATAATTAAAAAAAGGCCCAGTTTTGCAACTGGACCTTTTTC AAAAAAAACAATAGGTAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MKKFMLFLALTLFLSITSCDSSSDDLVDAQNVEKLNKQKQILTKLEQLGIDSKNVTFIDNVSTDGRIVVESIDDLAEIFP KELNDEGKIQEMISKESSAQTIKNLSTAKSFDLSEYQRLSSTIPVPNSSMTVYYEFWYNSFYMSYNWNDGVKDVSVATIN GNGVYFSYNAVNYSANASYTVNIYGKFYYPIIIDGQNANIERPAKIICFFNPNLEYTTFPWQQYIFFTN
Sequences:
>Translated_229_residues MKKFMLFLALTLFLSITSCDSSSDDLVDAQNVEKLNKQKQILTKLEQLGIDSKNVTFIDNVSTDGRIVVESIDDLAEIFP KELNDEGKIQEMISKESSAQTIKNLSTAKSFDLSEYQRLSSTIPVPNSSMTVYYEFWYNSFYMSYNWNDGVKDVSVATIN GNGVYFSYNAVNYSANASYTVNIYGKFYYPIIIDGQNANIERPAKIICFFNPNLEYTTFPWQQYIFFTN >Mature_229_residues MKKFMLFLALTLFLSITSCDSSSDDLVDAQNVEKLNKQKQILTKLEQLGIDSKNVTFIDNVSTDGRIVVESIDDLAEIFP KELNDEGKIQEMISKESSAQTIKNLSTAKSFDLSEYQRLSSTIPVPNSSMTVYYEFWYNSFYMSYNWNDGVKDVSVATIN GNGVYFSYNAVNYSANASYTVNIYGKFYYPIIIDGQNANIERPAKIICFFNPNLEYTTFPWQQYIFFTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26209; Mature: 26209
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFMLFLALTLFLSITSCDSSSDDLVDAQNVEKLNKQKQILTKLEQLGIDSKNVTFIDN CHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC VSTDGRIVVESIDDLAEIFPKELNDEGKIQEMISKESSAQTIKNLSTAKSFDLSEYQRLS CCCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH STIPVPNSSMTVYYEFWYNSFYMSYNWNDGVKDVSVATINGNGVYFSYNAVNYSANASYT CCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCEEEEEEEECCEEEEEEEEEEECCCCEEE VNIYGKFYYPIIIDGQNANIERPAKIICFFNPNLEYTTFPWQQYIFFTN EEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEECCCEEEEEEEC >Mature Secondary Structure MKKFMLFLALTLFLSITSCDSSSDDLVDAQNVEKLNKQKQILTKLEQLGIDSKNVTFIDN CHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC VSTDGRIVVESIDDLAEIFPKELNDEGKIQEMISKESSAQTIKNLSTAKSFDLSEYQRLS CCCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH STIPVPNSSMTVYYEFWYNSFYMSYNWNDGVKDVSVATINGNGVYFSYNAVNYSANASYT CCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCEEEEEEEECCEEEEEEEEEEECCCCEEE VNIYGKFYYPIIIDGQNANIERPAKIICFFNPNLEYTTFPWQQYIFFTN EEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA