Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is trxA [C]

Identifier: 146302376

GI number: 146302376

Start: 5622595

End: 5623311

Strand: Direct

Name: trxA [C]

Synonym: Fjoh_4649

Alternate gene names: 146302376

Gene position: 5622595-5623311 (Clockwise)

Preceding gene: 146302375

Following gene: 146302377

Centisome position: 92.22

GC content: 36.12

Gene sequence:

>717_bases
ATGAAAAATAATAAAATCAAAAACAGCATTACAGCCTTGATTCTGCTTTTTGCAATCACAGCATTTTCGCAGAATAAAAG
CTCCAATACCGTTTCGCTTGATATTTTCTACAGCAAAATTCAGGCAGAAAAAAAGCCTCAGATAATTGATGCACGAGGTC
CCGAAGAATTTGCTTTAAACCATATTAACGGCGCAGTAAACTTCAATTTAGAATCAAAAAATTATGCCGAACAAGTTGCA
AAACTAGACAAATCAAAACCTGTTTTCACCTACTCCATTGGAGCAGGAAGAAGCGTTTGGCTCGCCGATGAATTATTAAA
AAACGGTTTTAAAGAAGCTTATAGTCTGGAAGGCGGTATTGCCAACTGGATTGGAAACGGAAAACCCTTTTATGCCAGTT
CCAAAAGCAAATTAACTCTTACGGAATACACTAAAATCGTTGCTGACAACAAAACTGTTTTGGTCGACATTGGATCGAAA
TACTGCAGCGCATGCACAAAAGTAAAGCCCGTTTTAGAAACGATCAAAACACAATACGGCGAGAATTTAAAAATCGTAGA
AATTGATCTCGAAACCAGTCCGCAGGTAATTGCCGACTTAAAAACGATTAAAGTTTTTCCAACTCTGATATTATATCAAA
ATGGCAAAATTGTTTTCAAAAAAGACGGCTTCAACGATTTAAAAAAAGATGTTGATGTGGCTTTGGCTTCTAAATAA

Upstream 100 bases:

>100_bases
GCAGGCATAATCTTCAAAAAATTAAGTAAACATAAAGTACGGCAGTGTATTCAAAATTAACCTTGAATACGCTGCCCGCT
TTTATCAAAACCTTTTCATT

Downstream 100 bases:

>100_bases
ACTTAATTCAAAACTAAACTAACCATAATGGCAGTCTATAAAAAAATAACCAAAATTGTAATATCCATTTTAATAGTGCT
TCTTATTCTGGCAGCATTTT

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: Thioredoxin Family Protein; Rhodanese Domain-Containing Protein; Thioredoxin

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKNNKIKNSITALILLFAITAFSQNKSSNTVSLDIFYSKIQAEKKPQIIDARGPEEFALNHINGAVNFNLESKNYAEQVA
KLDKSKPVFTYSIGAGRSVWLADELLKNGFKEAYSLEGGIANWIGNGKPFYASSKSKLTLTEYTKIVADNKTVLVDIGSK
YCSACTKVKPVLETIKTQYGENLKIVEIDLETSPQVIADLKTIKVFPTLILYQNGKIVFKKDGFNDLKKDVDVALASK

Sequences:

>Translated_238_residues
MKNNKIKNSITALILLFAITAFSQNKSSNTVSLDIFYSKIQAEKKPQIIDARGPEEFALNHINGAVNFNLESKNYAEQVA
KLDKSKPVFTYSIGAGRSVWLADELLKNGFKEAYSLEGGIANWIGNGKPFYASSKSKLTLTEYTKIVADNKTVLVDIGSK
YCSACTKVKPVLETIKTQYGENLKIVEIDLETSPQVIADLKTIKVFPTLILYQNGKIVFKKDGFNDLKKDVDVALASK
>Mature_238_residues
MKNNKIKNSITALILLFAITAFSQNKSSNTVSLDIFYSKIQAEKKPQIIDARGPEEFALNHINGAVNFNLESKNYAEQVA
KLDKSKPVFTYSIGAGRSVWLADELLKNGFKEAYSLEGGIANWIGNGKPFYASSKSKLTLTEYTKIVADNKTVLVDIGSK
YCSACTKVKPVLETIKTQYGENLKIVEIDLETSPQVIADLKTIKVFPTLILYQNGKIVFKKDGFNDLKKDVDVALASK

Specific function: Participates In Various Redox Reactions Through The Reversible Oxidation Of Its Active Center Dithiol To A Disulfide And Catalyzes Dithiol-Disulfide Exchange Reactions. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26342; Mature: 26342

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNKIKNSITALILLFAITAFSQNKSSNTVSLDIFYSKIQAEKKPQIIDARGPEEFALN
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHCCCCCCEEECCCCHHHHHH
HINGAVNFNLESKNYAEQVAKLDKSKPVFTYSIGAGRSVWLADELLKNGFKEAYSLEGGI
HCCCEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCH
ANWIGNGKPFYASSKSKLTLTEYTKIVADNKTVLVDIGSKYCSACTKVKPVLETIKTQYG
HHHCCCCCCEEECCCCEEEHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHC
ENLKIVEIDLETSPQVIADLKTIKVFPTLILYQNGKIVFKKDGFNDLKKDVDVALASK
CCEEEEEEECCCCCHHHHHHHHHEEEEEEEEEECCEEEEEECCCHHHHHHHCEEECCC
>Mature Secondary Structure
MKNNKIKNSITALILLFAITAFSQNKSSNTVSLDIFYSKIQAEKKPQIIDARGPEEFALN
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHCCCCCCEEECCCCHHHHHH
HINGAVNFNLESKNYAEQVAKLDKSKPVFTYSIGAGRSVWLADELLKNGFKEAYSLEGGI
HCCCEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCH
ANWIGNGKPFYASSKSKLTLTEYTKIVADNKTVLVDIGSKYCSACTKVKPVLETIKTQYG
HHHCCCCCCEEECCCCEEEHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHC
ENLKIVEIDLETSPQVIADLKTIKVFPTLILYQNGKIVFKKDGFNDLKKDVDVALASK
CCEEEEEEECCCCCHHHHHHHHHEEEEEEEEEECCEEEEEECCCHHHHHHHCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA