| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yheT [H]
Identifier: 146302338
GI number: 146302338
Start: 5574882
End: 5575865
Strand: Reverse
Name: yheT [H]
Synonym: Fjoh_4611
Alternate gene names: 146302338
Gene position: 5575865-5574882 (Counterclockwise)
Preceding gene: 146302342
Following gene: 146302337
Centisome position: 91.45
GC content: 35.06
Gene sequence:
>984_bases ATGCCGCTAATCGAACAGTCAGAATATACTTTCCCTTCTATTATTCATCGCAACAGGCATGTCTCAACTATTTATGCCGC TTTGTTTAAAAAATTTGAAGTTCCGGAATATACAAGAGAGAAACATGAACTCAATGATGGAGATTTTATCAACATTGATT TTGTTTTAAACGATTCGAAAAAAGCAGTTATTTTATGTCATGGTCTAGAAGGAGATTCCCGTAGAACTTATAATAACAGC TGCGCAGCTTATTTTCTACAGAAAGAGTTTTCTGTTTTTGCCTGGAACAACCGCACTTGTGGAGGAGAAATGAACCGCCT GCCAAGACTTTATCATCATGGTGCAGTTGATGATTTAGACGAAGTGGTTCAGTTTGTTTTGAGAAAAGGTTTTGATGATG TTTATTTGATTGGTTATTCAATGGGAGGTGTTCAGCTTTTAAATTATTTTGGCTGGACTAAAATTGATAAGCGTATAAAA GCAGGAGTTTCTATTTCTGTGCCTACACATATTGCAACAAGTGCTGCAGTACTCAAACAAGGTTTTAACAGGGTATATTT AAAGAATTTTACGATTGATATAAAAAGAAAACTAAAATATAAAGCAGCTCAGTTTCCGGATTTTATAAATCGAGATCAAA TTGACAAAATTTCATCTTTTGACGAAGTTGATCATTACTTTACAGCACCTCTGCATGGTTTTGCAAGTCGTGAGGATTAC TACCAGCGTGTTTCTCCCGAATTTTCTCTTAAAAACATTACCACTCCGGTTTTAATTATTAATTCTCTTGATGATCCTTT TTTAGGCGAAAGATGTTATCCAAGGGCTATTGCACAAGACAGTGAATATGTTTATCTTGAAACTCCAAAATATGGCGGAC ATTGTGCTTTTCCGCTTCGTGATTCTATGTATTCTTATGCAGAGAAAAGAGCCTATGACTTTTTTGAATCTCGTGAAAAA AATGCTCAGATTATCAAAGCTTAG
Upstream 100 bases:
>100_bases GAGTGGCTTTTTTGTTTTTAAAAAGAAATAAAAAGACAGTTTTAAATTACATATTGATTGATTTATTAGATTTGTAGTGC GCACCGTAAAACTTTTTGTT
Downstream 100 bases:
>100_bases CAATAATTATTTCAACTGTTTTTTAAACAGCAGTTTTTTAATATATAATTATTAAAGTATAGCAGTAATAGATAAATTTT GCAGAAGTTTTATCTAAATA
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MPLIEQSEYTFPSIIHRNRHVSTIYAALFKKFEVPEYTREKHELNDGDFINIDFVLNDSKKAVILCHGLEGDSRRTYNNS CAAYFLQKEFSVFAWNNRTCGGEMNRLPRLYHHGAVDDLDEVVQFVLRKGFDDVYLIGYSMGGVQLLNYFGWTKIDKRIK AGVSISVPTHIATSAAVLKQGFNRVYLKNFTIDIKRKLKYKAAQFPDFINRDQIDKISSFDEVDHYFTAPLHGFASREDY YQRVSPEFSLKNITTPVLIINSLDDPFLGERCYPRAIAQDSEYVYLETPKYGGHCAFPLRDSMYSYAEKRAYDFFESREK NAQIIKA
Sequences:
>Translated_327_residues MPLIEQSEYTFPSIIHRNRHVSTIYAALFKKFEVPEYTREKHELNDGDFINIDFVLNDSKKAVILCHGLEGDSRRTYNNS CAAYFLQKEFSVFAWNNRTCGGEMNRLPRLYHHGAVDDLDEVVQFVLRKGFDDVYLIGYSMGGVQLLNYFGWTKIDKRIK AGVSISVPTHIATSAAVLKQGFNRVYLKNFTIDIKRKLKYKAAQFPDFINRDQIDKISSFDEVDHYFTAPLHGFASREDY YQRVSPEFSLKNITTPVLIINSLDDPFLGERCYPRAIAQDSEYVYLETPKYGGHCAFPLRDSMYSYAEKRAYDFFESREK NAQIIKA >Mature_326_residues PLIEQSEYTFPSIIHRNRHVSTIYAALFKKFEVPEYTREKHELNDGDFINIDFVLNDSKKAVILCHGLEGDSRRTYNNSC AAYFLQKEFSVFAWNNRTCGGEMNRLPRLYHHGAVDDLDEVVQFVLRKGFDDVYLIGYSMGGVQLLNYFGWTKIDKRIKA GVSISVPTHIATSAAVLKQGFNRVYLKNFTIDIKRKLKYKAAQFPDFINRDQIDKISSFDEVDHYFTAPLHGFASREDYY QRVSPEFSLKNITTPVLIINSLDDPFLGERCYPRAIAQDSEYVYLETPKYGGHCAFPLRDSMYSYAEKRAYDFFESREKN AQIIKA
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=273, Percent_Identity=27.8388278388278, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI194578891, Length=302, Percent_Identity=22.1854304635762, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI23397659, Length=324, Percent_Identity=20.9876543209877, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI23397661, Length=324, Percent_Identity=20.9876543209877, Blast_Score=69, Evalue=8e-12, Organism=Escherichia coli, GI1789752, Length=287, Percent_Identity=28.9198606271777, Blast_Score=127, Evalue=9e-31, Organism=Caenorhabditis elegans, GI71985405, Length=289, Percent_Identity=25.9515570934256, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17566110, Length=289, Percent_Identity=25.6055363321799, Blast_Score=85, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6323866, Length=263, Percent_Identity=27.7566539923954, Blast_Score=91, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6325162, Length=286, Percent_Identity=26.2237762237762, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6319655, Length=278, Percent_Identity=25.5395683453237, Blast_Score=73, Evalue=6e-14, Organism=Drosophila melanogaster, GI24652003, Length=302, Percent_Identity=28.476821192053, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI281398151, Length=302, Percent_Identity=28.476821192053, Blast_Score=108, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 37906; Mature: 37775
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: PS00120 LIPASE_SER ; PS01133 UPF0017
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIEQSEYTFPSIIHRNRHVSTIYAALFKKFEVPEYTREKHELNDGDFINIDFVLNDSK CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEEECCC KAVILCHGLEGDSRRTYNNSCAAYFLQKEFSVFAWNNRTCGGEMNRLPRLYHHGAVDDLD CEEEEEECCCCCCCCCCCCCHHHEEEECCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHH EVVQFVLRKGFDDVYLIGYSMGGVQLLNYFGWTKIDKRIKAGVSISVPTHIATSAAVLKQ HHHHHHHHCCCCCEEEEEECCCHHHHHHHHCHHHHHHHHHCCEEEECCHHHHHHHHHHHH GFNRVYLKNFTIDIKRKLKYKAAQFPDFINRDQIDKISSFDEVDHYFTAPLHGFASREDY CCCEEEEEEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHCCCCHHCCCCHHHH YQRVSPEFSLKNITTPVLIINSLDDPFLGERCYPRAIAQDSEYVYLETPKYGGHCAFPLR HHHCCCCCCHHCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCEECCCHH DSMYSYAEKRAYDFFESREKNAQIIKA HHHHHHHHHHHHHHHHHCCCCCEEECC >Mature Secondary Structure PLIEQSEYTFPSIIHRNRHVSTIYAALFKKFEVPEYTREKHELNDGDFINIDFVLNDSK CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEEECCC KAVILCHGLEGDSRRTYNNSCAAYFLQKEFSVFAWNNRTCGGEMNRLPRLYHHGAVDDLD CEEEEEECCCCCCCCCCCCCHHHEEEECCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHH EVVQFVLRKGFDDVYLIGYSMGGVQLLNYFGWTKIDKRIKAGVSISVPTHIATSAAVLKQ HHHHHHHHCCCCCEEEEEECCCHHHHHHHHCHHHHHHHHHCCEEEECCHHHHHHHHHHHH GFNRVYLKNFTIDIKRKLKYKAAQFPDFINRDQIDKISSFDEVDHYFTAPLHGFASREDY CCCEEEEEEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHCCCCHHCCCCHHHH YQRVSPEFSLKNITTPVLIINSLDDPFLGERCYPRAIAQDSEYVYLETPKYGGHCAFPLR HHHCCCCCCHHCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCEECCCHH DSMYSYAEKRAYDFFESREKNAQIIKA HHHHHHHHHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]