Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302335

Identifier: 146302335

GI number: 146302335

Start: 5572224

End: 5573000

Strand: Direct

Name: 146302335

Synonym: Fjoh_4608

Alternate gene names: NA

Gene position: 5572224-5573000 (Clockwise)

Preceding gene: 146302333

Following gene: 146302336

Centisome position: 91.39

GC content: 33.46

Gene sequence:

>777_bases
ATGAAAAAATCAATTACGGCAATTGCATTATTTATCATAAGTTTTTTTCTTCACGAAAATTGTTTCAGTCAGGCATCGAA
AAAAACAAAATTTAAAGTTTTAGTTTTATATGAAAACGGCGGACATCATCTGGCTTTTTCTAAAGCAGCAAAACCCTGGT
TGAACAAACTGGCGGCCGAAAACAATTTTACAATAGATTATATTGAAAATACAAAGACAATTAATGAATCTCTTTTAAAC
CAATACCGTCTTTTTATACAACTCGATTATCCGCCTTACACATGGAGTGAAGAATCTATGAAAGCTTTTCAAAAATATAT
GAATGACGGCAAAGGAGGCTGGATAGGTCTGCATCATGCAACTTTATTAGGAGAATTTGATGGTTATCCTATCTGGAATT
GGTTCTCTGATTTAATGGGCGGTATTAGATTCGTTAACTATATACCTGATTTTGCCAGTGCAAAAGTTATTGTTGAAGAT
AAAGTGCATCCTGTAATGAAAGGAGTTCCCGCTGATTTTCTGGTACAAAAAGAAGAATGGTACACTTATGACAAAAGTCC
GCGCAAAATTGTTCACGTTTTAGCTTCTGTAGATGAGTCGACTTATCAGCCGGATTCAAAAATAAAAATGGGAGATCACC
CTGTTGTTTGGACAAATGAGCATTTTACATCCCGAAATGTTTATATTTTTATGGGACATTCTCCCAATTTATTTGATAAT
AAAGCCTACACTGCTCTTTTTAAAAATGCAATTTTATGGGCTTCAAATAAAAAATAA

Upstream 100 bases:

>100_bases
CTGTACTTAATACTACTTTATTAAGACACTATATTAATGATTGAAAAGTGAAAAGCATATTGTAAATTTGAAATTAAACA
TTCATCTTTTGGGCAGCGAA

Downstream 100 bases:

>100_bases
GTTCGCCGTTTTATCTATTTTCAGAATATCTATTTATTCATGAAACCTTATATTCGCAGAGAATTTAAACAAACAAAAAA
GAAAAATGATCCAAAAGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted Glycosyl Hydrolase; PKD Domain Containing Protein; Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Sigma-70 Factor; Cytochrome C Class I; Crp/Fnr Family Transcriptional Regulator; YVTN Beta-Propeller Repeat-Containing Protein; Glucose/Sorbosone Dehydrogenase; LOW QUALITY PROTEIN Sigma-70 Factor; Endo-1 4-Beta-Xylanase A; Low Quality Protein; 40-Residue YVTN Beta-Propeller Repeat-Containing Protein; Glycoside Hydrolase Family; Pkd Domain Containing Protein; 40-Residue YVTN Beta-Propeller Repeat Protein

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKKSITAIALFIISFFLHENCFSQASKKTKFKVLVLYENGGHHLAFSKAAKPWLNKLAAENNFTIDYIENTKTINESLLN
QYRLFIQLDYPPYTWSEESMKAFQKYMNDGKGGWIGLHHATLLGEFDGYPIWNWFSDLMGGIRFVNYIPDFASAKVIVED
KVHPVMKGVPADFLVQKEEWYTYDKSPRKIVHVLASVDESTYQPDSKIKMGDHPVVWTNEHFTSRNVYIFMGHSPNLFDN
KAYTALFKNAILWASNKK

Sequences:

>Translated_258_residues
MKKSITAIALFIISFFLHENCFSQASKKTKFKVLVLYENGGHHLAFSKAAKPWLNKLAAENNFTIDYIENTKTINESLLN
QYRLFIQLDYPPYTWSEESMKAFQKYMNDGKGGWIGLHHATLLGEFDGYPIWNWFSDLMGGIRFVNYIPDFASAKVIVED
KVHPVMKGVPADFLVQKEEWYTYDKSPRKIVHVLASVDESTYQPDSKIKMGDHPVVWTNEHFTSRNVYIFMGHSPNLFDN
KAYTALFKNAILWASNKK
>Mature_258_residues
MKKSITAIALFIISFFLHENCFSQASKKTKFKVLVLYENGGHHLAFSKAAKPWLNKLAAENNFTIDYIENTKTINESLLN
QYRLFIQLDYPPYTWSEESMKAFQKYMNDGKGGWIGLHHATLLGEFDGYPIWNWFSDLMGGIRFVNYIPDFASAKVIVED
KVHPVMKGVPADFLVQKEEWYTYDKSPRKIVHVLASVDESTYQPDSKIKMGDHPVVWTNEHFTSRNVYIFMGHSPNLFDN
KAYTALFKNAILWASNKK

Specific function: Unknown

COG id: COG3828

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29840; Mature: 29840

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSITAIALFIISFFLHENCFSQASKKTKFKVLVLYENGGHHLAFSKAAKPWLNKLAAE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEHHHHHHHHHHHHCC
NNFTIDYIENTKTINESLLNQYRLFIQLDYPPYTWSEESMKAFQKYMNDGKGGWIGLHHA
CCCEEEEECCCHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHH
TLLGEFDGYPIWNWFSDLMGGIRFVNYIPDFASAKVIVEDKVHPVMKGVPADFLVQKEEW
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHCCCHHHEEEHHHH
YTYDKSPRKIVHVLASVDESTYQPDSKIKMGDHPVVWTNEHFTSRNVYIFMGHSPNLFDN
EECCCCHHHHHHHHHHCCHHCCCCCCCEEECCCCEEECCCCCCCCCEEEEECCCCCCCCC
KAYTALFKNAILWASNKK
HHHHHHHHHHEEEECCCC
>Mature Secondary Structure
MKKSITAIALFIISFFLHENCFSQASKKTKFKVLVLYENGGHHLAFSKAAKPWLNKLAAE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEHHHHHHHHHHHHCC
NNFTIDYIENTKTINESLLNQYRLFIQLDYPPYTWSEESMKAFQKYMNDGKGGWIGLHHA
CCCEEEEECCCHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHH
TLLGEFDGYPIWNWFSDLMGGIRFVNYIPDFASAKVIVEDKVHPVMKGVPADFLVQKEEW
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHCCCHHHEEEHHHH
YTYDKSPRKIVHVLASVDESTYQPDSKIKMGDHPVVWTNEHFTSRNVYIFMGHSPNLFDN
EECCCCHHHHHHHHHHCCHHCCCCCCCEEECCCCEEECCCCCCCCCEEEEECCCCCCCCC
KAYTALFKNAILWASNKK
HHHHHHHHHHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA