Click here to switch to the map view.

The map label for this gene is fadF [H]

Identifier: 146302310

GI number: 146302310

Start: 5541748

End: 5543079

Strand: Reverse

Name: fadF [H]

Synonym: Fjoh_4583

Alternate gene names: 146302310

Gene position: 5543079-5541748 (Counterclockwise)

Preceding gene: 146302311

Following gene: 146302309

Centisome position: 90.92

GC content: 35.14

Gene sequence:

>1332_bases
ATGAGTTATTTAGATAATATTTTATTTGCCATACTTCTTATAGTAGGTTTCGGCTTTTTTGCAGCGAGCGTGAAAAAGAT
CATCCGAAACATTAATCTGGGAGTTGATGTAGATCGAAAAGATAATCCTAAAGCTCGTTGGAAAAACATGGCATTGATTG
CTCTTGGGCAGTCAAGAATGGTGAGACGCCCTGTTGCCGGAATACTGCATATTTTTGTATATGTAGGTTTCATAATTATT
AATATCGAATTACTCGAAATTATAATCGATGGGTTATTTGGAACTCATAGAATTTTTGCACCTTATTTAGGCGTAGTCTA
TGATGTTTTAATTGCTTCATTTGAAATATTGGCAATACTTGTAATTTTTGCCGTTACGGTTTTTTGGCTTAGAAGAAACT
TCATCAGATTAAAACGTTTTATACATTCTGATTTAACAGGATTTCCAAAAAGCGATGCAAATTATATTTTGTATTTTGAA
ACCGTTTTAATGATTTTGTTTTTGTTAATGAACGCTTCAGATCTTCATTTGCAAAACGTTCCGGGAGGAGTTTTTCATAA
AGCAGGAAGTTTCCCGATAAGCCAGTTTATTGCTCCAATTTTTAACGGAATGTCAAACGAATTGGTTGTAATATTATTTG
AAACATTTTGGTGGCTTCATATAATTGGTATTTTGATTTTTATGAACTATTTATACTTCTCAAAACACCTTCATATCCTG
TTAGCGTTCCCAAACACTTATTTTGCGAATTTAAAACCAGAAGGACAGTTTGATAATTTAGCTTCAGTTACAAAAGAAGT
TAAATTAATGATGGACCCAAATGCTGATCCGTTTGCTGCAGCTCCTGTTGATGAAAATGCAGCGCCGAGTAAATTTGGAG
CAAGCGATGTTCAGGATTTAAACTGGGTACAGCTTTTAAATGCATATACTTGTACAGAATGCGGACGTTGTACGTCATCT
TGTCCGGCAAACCAAACAGGTAAAAAATTGTCTCCGCGTAAAATTATGATGGATACAAGAGACCGTCTTCAGGAAGTTGG
AAAGAATATTGATGCCAATAAAGGTGTTTTTGTTCCAGATAATAAAACATTATTAAACGATTACATTACTCCGGAAGAAC
TATGGGCTTGTACTTCATGCAATGCCTGTGTAGAAGAATGTCCTGTAAATATTAGTCCATTGTCTATTATTATGGATATG
CGTCGTTATTTAGTGATGGAGCAGAGCGCTGCGCCAATGTCATTAAATGCTATGATGACTAATATTGAAAATAACGGAGC
ACCTTGGCAGTACAGCCAGCAGGACCGATTAAATTGGAAAAACGAGAACTAG

Upstream 100 bases:

>100_bases
TCCAACTCGTTACGTAAATGTTTCTCTTTTTGGAAAGAAAAATAAACCTTACGTAGCACCAACAGAAAATACAAACTCAA
CTGATAAAAAATAATTGTAA

Downstream 100 bases:

>100_bases
AAAAGATATAGTTTAATCGGTTAATCGTTAATTCGTTTAATCGTACTTAGGATTCGAGGAACTGCCGATTAAACAATTGA
ACAAATCAACGATTAAACAA

Product: Fe-S oxidoreductase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MSYLDNILFAILLIVGFGFFAASVKKIIRNINLGVDVDRKDNPKARWKNMALIALGQSRMVRRPVAGILHIFVYVGFIII
NIELLEIIIDGLFGTHRIFAPYLGVVYDVLIASFEILAILVIFAVTVFWLRRNFIRLKRFIHSDLTGFPKSDANYILYFE
TVLMILFLLMNASDLHLQNVPGGVFHKAGSFPISQFIAPIFNGMSNELVVILFETFWWLHIIGILIFMNYLYFSKHLHIL
LAFPNTYFANLKPEGQFDNLASVTKEVKLMMDPNADPFAAAPVDENAAPSKFGASDVQDLNWVQLLNAYTCTECGRCTSS
CPANQTGKKLSPRKIMMDTRDRLQEVGKNIDANKGVFVPDNKTLLNDYITPEELWACTSCNACVEECPVNISPLSIIMDM
RRYLVMEQSAAPMSLNAMMTNIENNGAPWQYSQQDRLNWKNEN

Sequences:

>Translated_443_residues
MSYLDNILFAILLIVGFGFFAASVKKIIRNINLGVDVDRKDNPKARWKNMALIALGQSRMVRRPVAGILHIFVYVGFIII
NIELLEIIIDGLFGTHRIFAPYLGVVYDVLIASFEILAILVIFAVTVFWLRRNFIRLKRFIHSDLTGFPKSDANYILYFE
TVLMILFLLMNASDLHLQNVPGGVFHKAGSFPISQFIAPIFNGMSNELVVILFETFWWLHIIGILIFMNYLYFSKHLHIL
LAFPNTYFANLKPEGQFDNLASVTKEVKLMMDPNADPFAAAPVDENAAPSKFGASDVQDLNWVQLLNAYTCTECGRCTSS
CPANQTGKKLSPRKIMMDTRDRLQEVGKNIDANKGVFVPDNKTLLNDYITPEELWACTSCNACVEECPVNISPLSIIMDM
RRYLVMEQSAAPMSLNAMMTNIENNGAPWQYSQQDRLNWKNEN
>Mature_442_residues
SYLDNILFAILLIVGFGFFAASVKKIIRNINLGVDVDRKDNPKARWKNMALIALGQSRMVRRPVAGILHIFVYVGFIIIN
IELLEIIIDGLFGTHRIFAPYLGVVYDVLIASFEILAILVIFAVTVFWLRRNFIRLKRFIHSDLTGFPKSDANYILYFET
VLMILFLLMNASDLHLQNVPGGVFHKAGSFPISQFIAPIFNGMSNELVVILFETFWWLHIIGILIFMNYLYFSKHLHILL
AFPNTYFANLKPEGQFDNLASVTKEVKLMMDPNADPFAAAPVDENAAPSKFGASDVQDLNWVQLLNAYTCTECGRCTSSC
PANQTGKKLSPRKIMMDTRDRLQEVGKNIDANKGVFVPDNKTLLNDYITPEELWACTSCNACVEECPVNISPLSIIMDMR
RYLVMEQSAAPMSLNAMMTNIENNGAPWQYSQQDRLNWKNEN

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 50222; Mature: 50091

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYLDNILFAILLIVGFGFFAASVKKIIRNINLGVDVDRKDNPKARWKNMALIALGQSRM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHCEEEEEECCHHH
VRRPVAGILHIFVYVGFIIINIELLEIIIDGLFGTHRIFAPYLGVVYDVLIASFEILAIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFAVTVFWLRRNFIRLKRFIHSDLTGFPKSDANYILYFETVLMILFLLMNASDLHLQNV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCEECCC
PGGVFHKAGSFPISQFIAPIFNGMSNELVVILFETFWWLHIIGILIFMNYLYFSKHLHIL
CCHHHHCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
LAFPNTYFANLKPEGQFDNLASVTKEVKLMMDPNADPFAAAPVDENAAPSKFGASDVQDL
EECCCCEEECCCCCCCCHHHHHHHHHHEEEECCCCCCCEECCCCCCCCCCCCCCCHHHHH
NWVQLLNAYTCTECGRCTSSCPANQTGKKLSPRKIMMDTRDRLQEVGKNIDANKGVFVPD
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCC
NKTLLNDYITPEELWACTSCNACVEECPVNISPLSIIMDMRRYLVMEQSAAPMSLNAMMT
CCHHHHHCCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
NIENNGAPWQYSQQDRLNWKNEN
HCCCCCCCCCCCCHHCCCCCCCC
>Mature Secondary Structure 
SYLDNILFAILLIVGFGFFAASVKKIIRNINLGVDVDRKDNPKARWKNMALIALGQSRM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHCEEEEEECCHHH
VRRPVAGILHIFVYVGFIIINIELLEIIIDGLFGTHRIFAPYLGVVYDVLIASFEILAIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFAVTVFWLRRNFIRLKRFIHSDLTGFPKSDANYILYFETVLMILFLLMNASDLHLQNV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCEECCC
PGGVFHKAGSFPISQFIAPIFNGMSNELVVILFETFWWLHIIGILIFMNYLYFSKHLHIL
CCHHHHCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
LAFPNTYFANLKPEGQFDNLASVTKEVKLMMDPNADPFAAAPVDENAAPSKFGASDVQDL
EECCCCEEECCCCCCCCHHHHHHHHHHEEEECCCCCCCEECCCCCCCCCCCCCCCHHHHH
NWVQLLNAYTCTECGRCTSSCPANQTGKKLSPRKIMMDTRDRLQEVGKNIDANKGVFVPD
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCC
NKTLLNDYITPEELWACTSCNACVEECPVNISPLSIIMDMRRYLVMEQSAAPMSLNAMMT
CCHHHHHCCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
NIENNGAPWQYSQQDRLNWKNEN
HCCCCCCCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]