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The map label for this gene is fadF [H]

Identifier: 146302309

GI number: 146302309

Start: 5540850

End: 5541641

Strand: Reverse

Name: fadF [H]

Synonym: Fjoh_4582

Alternate gene names: 146302309

Gene position: 5541641-5540850 (Counterclockwise)

Preceding gene: 146302310

Following gene: 146302308

Centisome position: 90.89

GC content: 36.99

Gene sequence:

>792_bases
ATGTCAGAAAGTTTAGTAGTACCAACAATGGCAGAAATGCTGGCCGAAGGAAAACAACCAGAAGTGTTGTTTTGGGTAGG
CTGTGCAGGAAGTTTTGATGATAGAGCAAAAAAAATTACGAAAGCATTTGTACGTATTTTAAACCGTACCAATGTTTCTT
TTGCGGTTTTGGGTACAGAAGAAAGCTGTACTGGAGATCCTGCAAAAAGAGCCGGAAATGAATTTTTGTTTCAAATGCAG
GCCATGATGAACATCGAGGTTTTAAATGCTTATGAAGCAAAAAAAATCGTTACCGCTTGTCCGCATTGTTTTAATACCTT
AAAAAATGAATATCCTGAATTAGGAGGAAACTATGAAGTTATTCATCATACAGAATTCCTGAAATCATTAATAAATGACG
GAAGACTTACAGTTGAAGGCGGACAGTTTAAAGGAAAGAAAATTACTTTTCACGATCCTTGTTATTTAGGAAGAGCTAAT
AAAGTTTACGAAGCACCTAGAGATTTAATTGAGAAACTAGACGTTGAATTAGTTGAAATGAAACGTTCTAAAGCAAACGG
ATTATGCTGTGGTGCAGGCGGTGCGCAGATGTTTAAAGATGCCGAACCTGGAAACAAAGAAGTAAATGTTCTGCGTACAG
AAGATGCTTTAGAAGTAAAACCGGATATTATTGCTGCCGGCTGTCCATTTTGCAACACCATGTTAACAGATGGTATTAAA
CATGCGCATAAAGAAGGCGAGATAAAAGTAATGGACGTTGCCGAATTAATTGCAAATGCACAGGATTTATAA

Upstream 100 bases:

>100_bases
TATAGTTTAATCGGTTAATCGTTAATTCGTTTAATCGTACTTAGGATTCGAGGAACTGCCGATTAAACAATTGAACAAAT
CAACGATTAAACAAAAAGAA

Downstream 100 bases:

>100_bases
AAGATTTTGAGTTGCTAAGGTTCTAAGATGCTAAGTTTTTAAACTTGAAACCCGAAACAATTCAAAAAAAATCTAAAATC
TAAAATTAAAAATGTATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSESLVVPTMAEMLAEGKQPEVLFWVGCAGSFDDRAKKITKAFVRILNRTNVSFAVLGTEESCTGDPAKRAGNEFLFQMQ
AMMNIEVLNAYEAKKIVTACPHCFNTLKNEYPELGGNYEVIHHTEFLKSLINDGRLTVEGGQFKGKKITFHDPCYLGRAN
KVYEAPRDLIEKLDVELVEMKRSKANGLCCGAGGAQMFKDAEPGNKEVNVLRTEDALEVKPDIIAAGCPFCNTMLTDGIK
HAHKEGEIKVMDVAELIANAQDL

Sequences:

>Translated_263_residues
MSESLVVPTMAEMLAEGKQPEVLFWVGCAGSFDDRAKKITKAFVRILNRTNVSFAVLGTEESCTGDPAKRAGNEFLFQMQ
AMMNIEVLNAYEAKKIVTACPHCFNTLKNEYPELGGNYEVIHHTEFLKSLINDGRLTVEGGQFKGKKITFHDPCYLGRAN
KVYEAPRDLIEKLDVELVEMKRSKANGLCCGAGGAQMFKDAEPGNKEVNVLRTEDALEVKPDIIAAGCPFCNTMLTDGIK
HAHKEGEIKVMDVAELIANAQDL
>Mature_262_residues
SESLVVPTMAEMLAEGKQPEVLFWVGCAGSFDDRAKKITKAFVRILNRTNVSFAVLGTEESCTGDPAKRAGNEFLFQMQA
MMNIEVLNAYEAKKIVTACPHCFNTLKNEYPELGGNYEVIHHTEFLKSLINDGRLTVEGGQFKGKKITFHDPCYLGRANK
VYEAPRDLIEKLDVELVEMKRSKANGLCCGAGGAQMFKDAEPGNKEVNVLRTEDALEVKPDIIAAGCPFCNTMLTDGIKH
AHKEGEIKVMDVAELIANAQDL

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 28994; Mature: 28863

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESLVVPTMAEMLAEGKQPEVLFWVGCAGSFDDRAKKITKAFVRILNRTNVSFAVLGTE
CCCCEECHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
ESCTGDPAKRAGNEFLFQMQAMMNIEVLNAYEAKKIVTACPHCFNTLKNEYPELGGNYEV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
IHHTEFLKSLINDGRLTVEGGQFKGKKITFHDPCYLGRANKVYEAPRDLIEKLDVELVEM
EEHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCHHHHHH
KRSKANGLCCGAGGAQMFKDAEPGNKEVNVLRTEDALEVKPDIIAAGCPFCNTMLTDGIK
HHHCCCCEEECCCCHHHHCCCCCCCCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHH
HAHKEGEIKVMDVAELIANAQDL
HHHCCCCEEEEEHHHHHCCCCCC
>Mature Secondary Structure 
SESLVVPTMAEMLAEGKQPEVLFWVGCAGSFDDRAKKITKAFVRILNRTNVSFAVLGTE
CCCEECHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
ESCTGDPAKRAGNEFLFQMQAMMNIEVLNAYEAKKIVTACPHCFNTLKNEYPELGGNYEV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
IHHTEFLKSLINDGRLTVEGGQFKGKKITFHDPCYLGRANKVYEAPRDLIEKLDVELVEM
EEHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCHHHHHH
KRSKANGLCCGAGGAQMFKDAEPGNKEVNVLRTEDALEVKPDIIAAGCPFCNTMLTDGIK
HHHCCCCEEECCCCHHHHCCCCCCCCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHH
HAHKEGEIKVMDVAELIANAQDL
HHHCCCCEEEEEHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]