| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302264
Identifier: 146302264
GI number: 146302264
Start: 5476408
End: 5476956
Strand: Direct
Name: 146302264
Synonym: Fjoh_4537
Alternate gene names: NA
Gene position: 5476408-5476956 (Clockwise)
Preceding gene: 146302258
Following gene: 146302265
Centisome position: 89.82
GC content: 32.42
Gene sequence:
>549_bases ATGAGAACTACAACTAATCTTAAAAAAGCGGTGAAATTTGTTAATAATTGTAAGTTCATTTTTTCTTTCAAAAATATTTT TAAGAAAAATTTATTGTCTGTACTCTTTCTTTTAATTACAACAATTTCATTTGCTCAATCGGGTTCGTGCAGCGCATCTT TGATTGTTGAAAATAATGGCAATATCAGGAGCACTCCTCTCGATGGAACGTATTACTCAATGGTTCTGACCAACAACAGT TCTTCTACAGACACTTTTGTTTTAAGTTCTAAGAATATAAATGCTTCTTGTGCTAATACAGACGGAAGTTCTACTGCAGG AAATGTCATAATCAATACTGATTTTATTAATTCTGAAAGAAACTCTCTAAGTGAAATAACGCTAAGCGCAGGTGAATCTG TAAATTTTTATATCCACGTTACAATTCCTGCCGGTACTTCGACACAAAAATGGTCTTGCAATAAGATTACCGCTGCTTCA AAAAATTGCAGCAACTATTCAGTTGATGCTGTTTTACATACTTACATCATTAATCCGGTTAATGATTAA
Upstream 100 bases:
>100_bases TTTAGGTTAGTTGCAGATAAAAAAATTTAATTATAAAAACTCTAATATAATTTTGATTCTGTTAAAATTTTAGAAATACC ACTAACAAAAATCCTAAATT
Downstream 100 bases:
>100_bases ACAAGATATATCAAGTATACCCTTAAAATGATTTAAAATGGAAAAACAATTACTTTTTTTAAACAATTTTTTACGAGATA TAAAAAAAATACAATTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MRTTTNLKKAVKFVNNCKFIFSFKNIFKKNLLSVLFLLITTISFAQSGSCSASLIVENNGNIRSTPLDGTYYSMVLTNNS SSTDTFVLSSKNINASCANTDGSSTAGNVIINTDFINSERNSLSEITLSAGESVNFYIHVTIPAGTSTQKWSCNKITAAS KNCSNYSVDAVLHTYIINPVND
Sequences:
>Translated_182_residues MRTTTNLKKAVKFVNNCKFIFSFKNIFKKNLLSVLFLLITTISFAQSGSCSASLIVENNGNIRSTPLDGTYYSMVLTNNS SSTDTFVLSSKNINASCANTDGSSTAGNVIINTDFINSERNSLSEITLSAGESVNFYIHVTIPAGTSTQKWSCNKITAAS KNCSNYSVDAVLHTYIINPVND >Mature_182_residues MRTTTNLKKAVKFVNNCKFIFSFKNIFKKNLLSVLFLLITTISFAQSGSCSASLIVENNGNIRSTPLDGTYYSMVLTNNS SSTDTFVLSSKNINASCANTDGSSTAGNVIINTDFINSERNSLSEITLSAGESVNFYIHVTIPAGTSTQKWSCNKITAAS KNCSNYSVDAVLHTYIINPVND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19726; Mature: 19726
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTTNLKKAVKFVNNCKFIFSFKNIFKKNLLSVLFLLITTISFAQSGSCSASLIVENNG CCCCHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC NIRSTPLDGTYYSMVLTNNSSSTDTFVLSSKNINASCANTDGSSTAGNVIINTDFINSER CEEECCCCCEEEEEEEECCCCCCEEEEEECCCCCCEECCCCCCCCCCCEEEEECCCCCCC NSLSEITLSAGESVNFYIHVTIPAGTSTQKWSCNKITAASKNCSNYSVDAVLHTYIINPV CCHHEEEEECCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHEEEEEEECCC ND CC >Mature Secondary Structure MRTTTNLKKAVKFVNNCKFIFSFKNIFKKNLLSVLFLLITTISFAQSGSCSASLIVENNG CCCCHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC NIRSTPLDGTYYSMVLTNNSSSTDTFVLSSKNINASCANTDGSSTAGNVIINTDFINSER CEEECCCCCEEEEEEEECCCCCCEEEEEECCCCCCEECCCCCCCCCCCEEEEECCCCCCC NSLSEITLSAGESVNFYIHVTIPAGTSTQKWSCNKITAASKNCSNYSVDAVLHTYIINPV CCHHEEEEECCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHEEEEEEECCC ND CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA